Detailed information of XP_068734045.1 in Montipora capricornis

Genomic Location: chr2:62135235...62151674
NR annotation: XP_029184973.2, microtubule-associated protein futsch-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W3Y4GAS2-like protein pickled eggs OS=Drosophila melanogaster OX=7227 GN=pigs PE=2 SV=2
O43903Growth arrest-specific protein 2 OS=Homo sapiens OX=9606 GN=GAS2 PE=1 SV=1
Q8JZP9GAS2-like protein 1 OS=Mus musculus OX=10090 GN=Gas2l1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001140 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan
PF02187
all species →
GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036534
all species →
Homologous_superfamilyGAR domain superfamilyInterproscan
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR003108
all species →
DomainGAR domainInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46756
all species →
TRANSGELINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008017
all species →
Molecular Functionmicrotubule bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0001578
all species →
Biological Processmicrotubule bundle formationInterproscan
GO:0001725
all species →
Cellular Componentstress fiberInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005884
all species →
Cellular Componentactin filamentInterproscan
GO:0008093
all species →
Molecular Functioncytoskeletal anchor activityInterproscan
GO:0031110
all species →
Biological Processregulation of microtubule polymerization or depolymerizationInterproscan
GO:0035371
all species →
Cellular Componentmicrotubule plus-endInterproscan
GO:0051015
all species →
Molecular Functionactin filament bindingInterproscan
GO:0051764
all species →
Biological Processactin crosslink formationInterproscan
GO:1904825
all species →
Biological Processprotein localization to microtubule plus-endInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_068734045.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068734045.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples
30TPM > 0
1Conditions
68.0Max TPM
26.1Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Polyps 36 30 26.12 67.98

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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