Gene detail

Detailed information of XP_068734331.1 in Montipora capricornis

Genomic Location: chr2:61688639...61713690
NR annotation: XP_029211951.2, uncharacterized protein LOC114975854 isoform X2 [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138030314

ATGCCGATTCAAACACCACAGTGGACAGAGTTTCTTCAATGTCCGATATGTACCAATGACTTTGATGACCTCAGCCGACAACCAATCAGCTTGGGATGTGGTCATACTATGTGTGTTTCTTGTTTATCAAAGCTGCCGAAAACACAGTGTCCATTTGACCAGGCTATTGTTGAAACTGATATCTCAAAGCTTCCTTATAACTATGCTCTCCTTCAGTTAGTTGGAGTCCAAATCCCAGATGATGTGCTTCCTGACATAGGAAGCATTCAGCACAATGCCTCTCAGTATAAAGCTGCCAAACATTCTATTGAAGACCTTGCAATGTTTTTGCAACCAGTCGCTGGTTCTAGCAATGGAATTGTTAATGGTACTGGCAATGGAAATACCTGTAATGGTGGTCTCAATGGAAATGGCAATAGTGTGCTTACAAGGCCTATGCAACGTAAGCTGGTCACCTTAGTAAACTGTCAACTGGCGGAAGCTGATGGACGAACCAGGGCTATGCGTGCTGCTCGGAGCCTTGGGGAAAGGACTGTTACTGAGCTTATTTTATTGCACCAAAATCAACAACAACTGTCTGGAAATTTGTGGGCTGCTGTGCGCAATCGTGGTTGTCAATTTTTAGGACCAGCAATGCAGGAGGAGGCATTGAAACTTATTTTGTTGGCACTTGAGGGGGGTGAAGCACTGTCTAGGAAAGTTTTGGTTCTGTTTGTGGTTCAGAAGCTTGAATCACAATTTCCACAAGCTTCAAAAACAAGCATTGGCCATGTAGTGCAGTTACTTTACAGGGCATCCTGTTTTAAGGTGGAAAAAAAGAACAATGAATCATCTTTGATGCAGCTTAAAGAACAGTTTCGCACTTACGATGCACTGAGAAAGGAGCATGATGCACAGATTGTTCAAATTGCAACTGAAGCAGGACTGCGTATTCTCCCTGATCAGTGGTCCTCACTTCTCTACGGAGATCTTGATCATAAGTCGCACATGCAGTCTATTATTGACAAGCTGCAATCTCCTGAATCATTTTCTCAAAGCATCCAGGAGTTGGTGATTGCACTTCAGAGGTCTGGCGACCCTGGTGATTTGTGCCAAATGAAGGAACAGTTTGAATTTCTCTCTCAGATTGATGCGTCACCAGAGGCAACATGTCCTGAGTGGAAAGAACTAGAGAATGCTATGAAAGCAGTGCATTCAGTCGTTCATGGGCTGGTGAAGTTTTCAAAAGTTTATGGCAAGGGAATGAGGGGCTCAAGTGACCCACCCCAGCCTCACAATGGCAACAAATTTAAAACAAACATGTGTAGGGATCATTCACGAGGTGGATGTCCACGGGGAATTCACTGCACCTTTGCACACTCTGAGGAGGAACTAGAGAGGTTTAGCAAAAGACGGCAACGGGCACCTCGCCCTACAGCTATTCCCAGAGGACCAGGACCTGTTGCAGGTCCAGATCAATATTCACCTCATGGTTCCATAGAAAACGGCTGTGAAAATAGCCCAACGGCCACGCAGGCTCCTACAAGTGCTGTTAATGGATCAGCGAGGTCTTCGCCACATTATTCTTCAGGTGAAATGTCACACTTTTCATCTGGTTATGGGGCCCCACCTCAGGTTAGTCGTAGGGACAACCAGGAACAAATCCAGATGATAACACAGAGAATAAAGCAAGTCTCCATACAGTCACAACAGCCCATGTACCAGAATGATGCATACTGTGGATCGCGTTTGCAATACGATCATGTGCCGTTACCGTATGCACCATCTTCAGGAAGTGACAGGGCAACATATTTTCAGGGATACTATTCTCCATCAGCCACACCACATGGCAATTCATATTCTAATGTTGTGTCTCGAGGAAAGGATGGAACAGTTGGAATTATGACCCCACCTTGCAACTCACCCTTGACGATTCAGGATGAAGCAATGACCAAAATGAATGGACTCAGTGGGATGAACGGACTGAATGGGATGAATGGATTGAATGGATTGAATGGAATGAATGGGTTAAATGGAATGACAAATGGACACGTGGATCACCATCACTCTATGTACAATGGCAGGGCGATGCGTCCAAGAAGAGATATGGCACCCTTACAATCACAGCCACCAGGAACTAGTGGCTATCCACGTTATGATCAATCATCATTTGGCTATCCATCAGATCCCACTGGTTATTGCAGTGCTCAGCCTGATTACTATAGTGTTCCATATGGCAGGGCTGCCGTGTCTTATGAACCTGTCCCACAGACTATCATGGGCTACTCTTTCACAAGACAATACCACGATCCTCGCTTTGGATCAAGAAAGCCATACATTCCAGGCAATGATCCATTTGAAGAACCTGGAAATGAAAACAGTGATACAGCAACTGAATATGAGCCCATCCTTAGTTTTGGAGTTCTTAACAGGAAGGACACGACACTGTCTAGTGCCAGCAGCGGGGTCAGCAGTGGCTCCCCACTCAGCCACTCTCCTGCTGCTAGCCAATCATCAAATTCCAGTTTATCACCGAGGCAACAGTCCCCTGTGGGGTGGCAACATGGGAGCGAGAATGACTTCAGCAACGTGAACCTTAAATTCTTAGAGGACAGTAGTACTCTGCCACCACCCCCGGGTATCAACAATGCTGCACCAATATGGTCACCTCATTGTGGAAACGAGAGGGGCAAGCTTTGGACCCGCTATAGTGTAGACTACGACGAGTGGTCGAGGAAAGAGGAGCAGATAAAAAACGATGAGCAGTTTGCGCGAGCTCTTCAGGAGAAACTCCAACATGACAGCAAATCGGCGGAAATAATCGGCAGTGAATTGTTAGGATCGCGGGACAATAAAGACCAAGGCATTGATCAGGGGAGGAGAGGGCAGAACATTCCAGATTGCGGCATAGGAATGGACAGCTTGGAGACTGAAGCAGAAATCAAGAAACGAAAGAAGGAAGAACACAGGCGTCTACTTCAGGAACGTAGAAATCTGCTTCAGCAACAGGAAAGAGAAAAACAGGAGCGAGATGATCGTATACTTGCCGAGGAACTAGCCTTAAATGATGCTCAACAAGCAGGGCTCTTCCCTGATCCTAGGTGCATTGTGAAACCCTATTCCAGTGTGATTTCCCGCGGGGCCCCCATGGGGATCGGTTTCGGCAGCCAGGGAAGCAGTGATGTTTCAGGGGAGTTAGATACGTTTAGCGGTTTTGGCAGCTTTCGTGGATCATGTGCATCTTCATTGGCTAATAATGACGAAGGCATAGATTCATCACAGATGACGTCAGGTTGCAGTGGAGACATACGTGTGCAAGAGTAA

Transcript

rna-XM_068878230.1

ATAATCCGGCCTTGCGTGTGCTCTCTTTTTGGCTCATTAATATTGTTAATTTGTAAAGGACAAGAAAGTGTATTATTTTATTACAGCGTCGAGGAGTGGATGAGATATATATACCCTCCAGCGAAGCAGTTAGCTGGTAACTtatattttcatgaaattaatgCCAAAGGAACCCTGTCGAAGTTGACTGACTACCTGTAGTAGTACTAATGTATGCTTCAGCTTATTGAAAGGTCAAGGACGTCTTCACAAAAGCGTACACAACAATTAAAAACGGCCAGGGTGTGCTTGGCATAAGATTTAGCTGGTCTCCAAAAGCTTTCAGCGTGCACAGCTCAGGGAACTGACTCGTATATCAGTGCATGGATCGGTAAAAGGACCAGTATTCGTATTCAAGGTTCATGGGCTTTACTTGCAGGAAACCGAGAAGGATACCAATGGTATTGAGCATCAGTAATTATTAATTTGCAACAAAGAATAACCTGCTGAAACCAATTATGCCGATTCAAACACCACAGTGGACAGAGTTTCTTCAATGTCCGATATGTACCAATGACTTTGATGACCTCAGCCGACAACCAATCAGCTTGGGATGTGGTCATACTATGTGTGTTTCTTGTTTATCAAAGCTGCCGAAAACACAGTGTCCATTTGACCAGGCTATTGTTGAAACTGATATCTCAAAGCTTCCTTATAACTATGCTCTCCTTCAGTTAGTTGGAGTCCAAATCCCAGATGATGTGCTTCCTGACATAGGAAGCATTCAGCACAATGCCTCTCAGTATAAAGCTGCCAAACATTCTATTGAAGACCTTGCAATGTTTTTGCAACCAGTCGCTGGTTCTAGCAATGGAATTGTTAATGGTACTGGCAATGGAAATACCTGTAATGGTGGTCTCAATGGAAATGGCAATAGTGTGCTTACAAGGCCTATGCAACGTAAGCTGGTCACCTTAGTAAACTGTCAACTGGCGGAAGCTGATGGACGAACCAGGGCTATGCGTGCTGCTCGGAGCCTTGGGGAAAGGACTGTTACTGAGCTTATTTTATTGCACCAAAATCAACAACAACTGTCTGGAAATTTGTGGGCTGCTGTGCGCAATCGTGGTTGTCAATTTTTAGGACCAGCAATGCAGGAGGAGGCATTGAAACTTATTTTGTTGGCACTTGAGGGGGGTGAAGCACTGTCTAGGAAAGTTTTGGTTCTGTTTGTGGTTCAGAAGCTTGAATCACAATTTCCACAAGCTTCAAAAACAAGCATTGGCCATGTAGTGCAGTTACTTTACAGGGCATCCTGTTTTAAGgtggaaaaaaagaacaatgaaTCATCTTTGATGCAGCTTAAAGAACAGTTTCGCACTTACGATGCACTGAGAAAGGAGCATGATGCACAGATTGTTCAAATTGCAACTGAAGCAGGACTGCGTATTCTCCCTGATCAGTGGTCCTCACTTCTCTACGGAGATCTTGATCATAAGTCGCACATGCAGTCTATTATTGACAAGCTGCAATCTCCTGAATCATTTTCTCAAAGCATCCAGGAGTTGGTGATTGCACTTCAGAGGTCTGGCGACCCTGGTGATTTGTGCCAAATGAAGGAACAGTTTGAATTTCTCTCTCAGATTGATGCGTCACCAGAGGCAACATGTCCTGAGTGGAAAGAACTAGAGAATGCTATGAAAGCAGTGCATTCAGTCGTTCATGGGCTGGTGAAGTTTTCAAAAGTTTATGGCAAGGGAATGAGGGGCTCAAGTGACCCACCCCagCCTCACAATGGcaacaaatttaaaacaaacatGTGTAGGGATCATTCACGAGGTGGATGTCCACGGGGAATTCACTGCACCTTTGCACACTCTGAGGAGGAACTAGAGAGGTTTAGCAAAAGACGGCAACGGGCACCTCGCCCTACAGCTATTCCCAGAGGACCAGGACCTGTTGCAGGTCCAGATCAATATTCACCTCATGGTTCCATAGAAAACGGCTGTGAAAATAGCCCAACGGCCACGCAGGCTCCTACAAGTGCTGTTAATGGATCAGCGAGGTCTTCGCCACATTATTCTTCAGGTGAAATGTCACACTTTTCATCTGGTTATGGGGCCCCACCTCAGGTTAGTCGTAGGGACAACCAGGAACAAATCCAGATGATAACACAGAGAATAAAGCAAGTCTCCATACAGTCACAACAGCCCATGTACCAGAATGATGCATACTGTGGATCGCGTTTGCAATACGATCATGTGCCGTTACCGTATGCACCATCTTCAGGAAGTGACAGGGCAACATATTTTCAGGGATACTATTCTCCATCAGCCACACCACATGGCAATTCATATTCTAATGTTGTGTCTCGAGGAAAGGATGGAACAGTTGGAATTATGACCCCACCTTGCAACTCACCCTTGACGATTCAGGATGAAGCAATGACCAAAATGAATGGACTCAGTGGGATGAACGGACTGAATGGGATGAATGGATTGAATGGATTGAATGGAATGAATGGGTTAAATGGAATGACAAATGGACACGTGGATCACCATCACTCTATGTACAATGGCAGGGCGATGCGTCCAAGAAGAGATATGGCACCCTTACAATCACAGCCACCAGGAACTAGTGGCTATCCACGTTATGATCAATCATCATTTGGCTATCCATCAGATCCCACTGGTTATTGCAGtgCTCAGCCTGATTACTATAGTGTTCCATATGGCAGGGCTGCCGTGTCTTATGAACCTGTCCCACAGACTATCATGGGCTACTCTTTCACAAGACAATACCACGATCCTCGCTTTGGATCAAGAAAGCCATACATTCCAGGCAATGATCCATTTGAAGAACCTGGAAATGAAAACAGTGATACAGCAACTGAATATGAGCCCATCCTTAGTTTTGGAGTTCTTAACAGGAAGGACACGACACTGTCTAGTGCCAGCAGCGGGGTCAGCAGTGGCTCCCCACTCAGCCACTCTCCTGCTGCTAGCCAATCATCAAATTCCAGTTTATCACCGAGGCAACAGTCCCCTGTGGGGTGGCAACATGGGAGCGAGAATGACTTCAGCAACGTGAACCTTAAATTCTTAGAGGACAGTAGTACTCTGCCACCACCCCCGGGTATCAACAATGCTGCACCAATATGGTCACCTCATTGTGGAAACGAGAGGGGCAAGCTTTGGACCCGCTATAGTGTAGACTACGACGAGTGGTCGAGGAAAGAGGAGCAGATAAAAAACGATGAGCAGTTTGCGCGAGCTCTTCAGGAGAAACTCCAACATGACAGCAAATCGGCGGAAATAATCGGCAGTGAATTGTTAGGATCGCGGGACAATAAAGACCAAGGCATTGATCAGGGGAGGAGAGGGCAGAACATTCCAGATTGCGGCATAGGAATGGACAGCTTGGAGACTGAAGCAGAAATCAAGAAACGAAAGAAGGAAGAACACAGGCGTCTACTTCAGGAACGTAGAAATCTGCTTCAGCAAcaggaaagagaaaaacagGAGCGAGATGATCGTATACTTGCCGAGGAACTAGCCTTAAATGATGCTCAACAAGCAGGGCTCTTCCCTGATCCTAGGTGCATTGTGAAACCCTATTCCAGTGTGATTTCCCGCGGGGCCCCCATGGGGATCGGTTTCGGCAGCCAGGGAAGCAGTGATGTTTCAGGGGAGTTAGATACGTTTAGCGGTTTTGGCAGCTTTCGTGGATCATGTGCATCTTCATTGGCTAATAATGACGAAGGCATAGATtcatcacagatgacgtcaggTTGCAGTGGAGACATACGTGTGCAAGAGTAAAGTGATGTCATTACAGTTTGTTAATCATTGATTTGTGTGAAGTATTATTTGTGTAAGTGCGCGTGTCTTAGAGACGTATATGAATGAAACCAATTGTTTGATTGCAACTTTCTTGTAAAAGTCGTGTTTAGAATTAGTTTAGGCCCCAGTCGAACtggttttatttttcctttcctgtTCATGGACATCGTTAACGGCACTTGTATAGCGCCCGTTTGTGGTTCTGGGTTTCAATTGAAGTATTAGCTCTTTATTTTAggaaaattaaagcaaaagTCGTGTAATTTCAGAAGAGTGGCCAacataaacagaaaaaaaaaataggggtttGGATTATACATAGAAATACAGCAATCAAACTAAGTGATATACACCGAGCGTTTAGTGTATTACTTCTTCACGGAGGTCAAAGCCTGTGGATTGCTACGCATAGCGTGACCTATTTTGGGAACAAAAATATCAACGTGGTTTTGTGATATTCAACCATTTTTTGGAAATCTGAATCTTAAACATGTTTCAGGTTAGATCGGTgacttttctttaaaaacattttttaaaatagagaGGGAAATGTGGCGGACGCCAAGTGTCAGTGTCGGGGATGTGGATAGCGAAAGTTGTTTAGGTGTCTAGGCCCTAGTTTCTGacgaaattttttcaaaagatGAACTTTTCGTCGTTTTCATCTTTGAGTAACATATCGTGTTCTCGCGCTCCAGCCACGTTTGTTACGCAAGCTTCAGAAGCCTTGCGTGACATAGTAGAATGATTGCGCAATAGGGAACAATGATGATATTCAATTTTGCTTGTGAAATATTTATAACTCTTCAACGGACCGAAGTAAATCAGTTATTCTTTCAAGAATCATTAGCAAACTCATAATTTAAGTGGTGTCCATAGATGTTGTATAATGGTGAAAAAAATTGTAGTGATTTCACATGTTGACAATTTGTCGTGTCGTACTATTAAAATAATGGATACGTTTCGTCTTTGGACAAAACAAGTTTTATCTTAAGCCAAGGCGGCGATGTTTGTAATATAAAATTGTGAAGTTAAATTTTTTGGCTAGGTCAGCGATAAAGTCAAACaattgttttggtttctttGGTAAAGAATGGTGATTTAATCAGTCATATTATGTGGGCCGACTTCGTTTGAACATTTGTAAAAGTATTTGTTTCTGTGTTGTGTTGTAGTTTTTAGTTCGTGATGTGATTTCCTCATAGTATCGAAACTTTTGTTACTTGGTGAAGCGTCGATGGTTTATATTTATAATAAGggtttttatttgttaaatattattttcagcTTTATCAATTACAGCGACTTCAGTGATGATTTGTTCCACTTTCTGTCGAAATGGCCAATTTATAGCCCAAGGGGATCTCTGTTTAGGCGACTCCAGCTACTGCAGAGCGTGTTTATAGTTCATCCTCaagtgtttgaagtttgttttacACATATTTAACAAACAGGTCTAATGGCTGGCGTATATGAATTTTCTCGCTCTGATTCGGGAGTGAGTGATTGGTTAATTTCTAAGAGGCGATTTATAGGCAAAAAGCCGATTCAATATTGCTAAAAGGAATTATGTACAATATTGCAATTTTACAGTTTTAAGTGGATCAATAAAAATGTTAGCGGCAAATGGCTTGTCTGATGTCGTTTATTTGCGACATGGCTTAAGTGTATTTTTGCAACTCGTCATAGCGTTACAGGTGTGTGGCTTTTACTTGTTCGTTGGGGAAGGAGGGATATCAAACGGAGACTCAAGGAGCGACTAAAAGTCGTGAGGCTGTAAAGCTTTGGGATTGTTGCGTGATTACAATTGTTTGGTTATAGCGTGGTAGTTAATGAAAGCAGCTAGAAATAGCACAGTGGGAAAAGGTTAGCTCACATTTAGTCCTATTAGTACATTTTATTGTACAAGTATTTGTATTCTGTTACTCCGAGTAAATGAGGCTAATAAAGTTGGCGAGTGTAAAATGGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4VGL6	Roquin-1 OS=Mus musculus OX=10090 GN=Rc3h1 PE=1 SV=1
Q5TC82	Roquin-1 OS=Homo sapiens OX=9606 GN=RC3H1 PE=1 SV=1
P0C090	Roquin-2 OS=Mus musculus OX=10090 GN=Rc3h2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003558 (this species only)
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18386 all species →	ROQ_II	Roquin II domain	Domain	Interproscan
PF00642 all species →	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan
PF21206 all species →	Roquin_1_2-like_ROQ	Roquin 1/2-like, ROQ domain	Domain	Interproscan
PF14634 all species →	zf-RING_5	zinc-RING finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041523 all species →	Domain	Roquin II	Interproscan
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR052249 all species →	Family	Roquin domain-containing protein	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR048575 all species →	Domain	Roquin 1/2-like, ROQ domain	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR036855 all species →	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13139 all species →	RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0000288 all species →	Biological Process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Interproscan
GO:0003725 all species →	Molecular Function	double-stranded RNA binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0010494 all species →	Cellular Component	cytoplasmic stress granule	Interproscan
GO:0035613 all species →	Molecular Function	RNA stem-loop binding	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15690	RC3H; RING finger and CCCH-type zinc finger domain-containing protein	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068734331.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

30TPM > 0

1Conditions

167.0Max TPM

69.1Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	30	69.13	167.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	167.00
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	166.88
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	137.24
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	136.71
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	135.40
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	122.70
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	106.96
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	104.63
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	101.47
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	97.37
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	95.01
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	78.22
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	76.95
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	74.71
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	73.49
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	69.32
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	66.62
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	66.46
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	61.25
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	61.14
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	60.77
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	60.15
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	53.75
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	52.55
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	49.33
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	48.54
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	46.92
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	40.52
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	38.87
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	37.71
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.