Gene detail

Detailed information of XP_068737565.1 in Montipora capricornis

Genomic Location: chr14:30695159...30696920
NR annotation: CAH3126336.1, unnamed protein product [Porites lobata]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9XTR8	Lipase ZK262.3 OS=Caenorhabditis elegans OX=6239 GN=txt-8 PE=1 SV=1
I1RPD9	Secreted mono- and diacylglycerol lipase 1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=FGL1 PE=1 SV=1
Q9HE20	Secreted mono- and diacylglycerol lipase 1 OS=Fusarium solani OX=169388 GN=NHL1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001286 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01764 all species →	Lipase_3	Lipase (class 3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002921 all species →	Domain	Fungal lipase-like domain	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45908 all species →	PROTEIN CBG11750-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068737565.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068737565.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

29TPM > 0

1Conditions

79.0Max TPM

36.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	29	36.55	78.96

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	78.96
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	69.82
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	69.42
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	68.28
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	68.00
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	67.77
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	64.40
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	62.10
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	60.81
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	54.43
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	48.89
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	48.77
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	41.91
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	41.85
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	41.74
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	40.85
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	40.33
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	38.36
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	33.48
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	33.11
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	32.34
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	31.96
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	30.24
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	28.94
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	28.70
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	26.85
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	22.57
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	20.80
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	19.95
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.