Genomic Location: chr14:30585701...30603255
NR annotation: BAV53109.1, Tcf/Lef transcription factor [Acropora digitifera]
Species Montipora capricornis · all data for this species · gene families
| CDS |
| LOC138033669 |
| Transcript |
| rna-XM_068881467.1 |
| Protein |
| XP_068737568.1 |
| UniProt accession | Description |
|---|---|
| Q9NQB0 | Transcription factor 7-like 2 OS=Homo sapiens OX=9606 GN=TCF7L2 PE=1 SV=2 |
| Q924A0 | Transcription factor 7-like 2 OS=Mus musculus OX=10090 GN=Tcf7l2 PE=1 SV=2 |
| P91943 | Protein pangolin, isoforms A/H/I/S OS=Drosophila melanogaster OX=7227 GN=pan PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004039 (this species only) · gene tree & orthology |
XP_068737568.1 in Montipora capricornis.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024940 all species → | Family | Transcription factor TCF/LEF | Interproscan |
| IPR036910 all species → | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| IPR027397 all species → | Homologous_superfamily | Catenin binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10373 all species → | TRANSCRIPTION FACTOR 7 FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000790 all species → | Cellular Component | chromatin | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0016055 all species → | Biological Process | Wnt signaling pathway | Interproscan |
| GO:0060070 all species → | Biological Process | canonical Wnt signaling pathway | Interproscan |
| GO:1990907 all species → | Cellular Component | beta-catenin-TCF complex | Interproscan |
XP_068737568.1.Transcript abundance of XP_068737568.1 across 36 RNA-seq samples of Montipora capricornis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Polyps | 36 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM,
StringTie quantification over 36 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
