Gene detail

Detailed information of XP_068737632.1 in Montipora capricornis

Genomic Location: chr14:35447098...35462907
NR annotation: XP_029202876.2, AP-5 complex subunit sigma-1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008570 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15001 all species →	AP-5_subunit_s1	AP-5 complex subunit sigma-1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029392 all species →	Family	AP-5 complex subunit sigma-1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16120 all species →	AP-5 COMPLEX SUBUNIT SIGMA-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0030119 all species →	Cellular Component	AP-type membrane coat adaptor complex	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0005770 all species →	Cellular Component	late endosome	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19024	AP5S1; AP-5 complex subunit sigma-1	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.