Detailed information of XP_068739491.1 in Montipora capricornis

Genomic Location: chr2:50463578...50470240
NR annotation: XP_029197802.2, U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LZH0U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus OX=9913 GN=SNRNP35 PE=2 SV=1
Q16560U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP35 PE=1 SV=1
Q5U1W5U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus OX=10116 GN=Snrnp35 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002747 (this species only)

 Pfam domain
No Pfam domain signature was detected for XP_068739491.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR051183
all species →		FamilyU1 snRNP 70 kDa and U11/U12 snRNP 35 kDaInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13952
all species →		U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0005689
all species →		Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0017069
all species →		Molecular FunctionsnRNA bindingInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_068739491.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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