Detailed information of XP_068740163.1 in Montipora capricornis

Genomic Location: chr1:30601419...30639847
NR annotation: XP_029214524.2, uncharacterized protein LOC114977839 [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P60330Separin OS=Mus musculus OX=10090 GN=Espl1 PE=1 SV=1
Q14674Separin OS=Homo sapiens OX=9606 GN=ESPL1 PE=1 SV=3
P33144Separin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bimB PE=4 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002281 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03568
all species →
Peptidase_C50Peptidase family C50FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005314
all species →
FamilyPeptidase C50, separaseInterproscan
IPR030397
all species →
DomainSEPARIN core domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12792
all species →
EXTRA SPINDLE POLES 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004197
all species →
Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005813
all species →
Cellular ComponentcentrosomeInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0051307
all species →
Biological Processmeiotic chromosome separationInterproscan
GO:0072686
all species →
Cellular Componentmitotic spindleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02365ESP1; separaseEC:3.4.22.49
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068740163.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples
28TPM > 0
1Conditions
11.2Max TPM
2.1Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Polyps 36 28 2.14 11.21

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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