Gene detail

Detailed information of XP_068742633.1 in Montipora capricornis

Genomic Location: chr3:19518428...19536111
NR annotation: XP_029197348.2, ketohexokinase-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q02974	Ketohexokinase OS=Rattus norvegicus OX=10116 GN=Khk PE=1 SV=1
P97328	Ketohexokinase OS=Mus musculus OX=10090 GN=Khk PE=1 SV=1
P50053	Ketohexokinase OS=Homo sapiens OX=9606 GN=KHK PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005335 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00294 all species →	PfkB	pfkB family carbohydrate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011611 all species →	Domain	Carbohydrate kinase PfkB	Interproscan
IPR002173 all species →	Conserved_site	Carbohydrate/purine kinase, PfkB, conserved site	Interproscan
IPR029056 all species →	Homologous_superfamily	Ribokinase-like	Interproscan
IPR034093 all species →	Family	Ketohexokinase	Interproscan
IPR052562 all species →	Family	Ketohexokinase-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42774 all species →	PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0004454 all species →	Molecular Function	ketohexokinase activity	Interproscan
GO:0006000 all species →	Biological Process	fructose metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00846	KHK; ketohexokinase	EC:2.7.1.3	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068742633.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

30TPM > 0

1Conditions

161.6Max TPM

62.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	30	62.83	161.60

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	161.60
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	119.47
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	96.04
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	94.40
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	90.44
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	90.27
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	89.90
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	86.55
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	85.34
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	84.80
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	82.23
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	78.87
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	77.67
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	76.07
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	74.92
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	74.50
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	74.41
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	73.72
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	69.29
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	68.21
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	66.47
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	65.10
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	61.36
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	58.44
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	52.71
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	52.13
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	48.80
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	45.49
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	43.39
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	19.31
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.