Gene detail

Detailed information of XP_068744932.1 in Montipora capricornis

Genomic Location: chr1:39059986...39097173
NR annotation: CAH3193692.1, unnamed protein product [Porites evermanni]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068888831.1

GGCCATTTAAATTATTCGGTCTCGTCGAAGATCCATGCTTATAAGGAATCTGTTAGTTTGCCGTTGGTTTTCAATCGGAAATAGACCATGCCGGCGGGAGTTTCAACCTCAGAAGTCAAATTTTTACTACTGTAACAAGAAACAAGAGGATGAATGTGAAAGTTTTATCTCGAAGGAAAACGGGACGGAGACCCCGCTATCTACAGGCACTGAGGGATTTTACAGCAGCTGATGCTTGCTTTTCTGATGGGGCAAATCCTCTTTCCTTTCACATAGGTGAAATCTTCACATTTTTGAGTCGCAGAGACAGTTACTGGGTTAATGTCGAGCGGACGATCTGGAAACACAACCGTCTCCTCAAGTCAAAAGATTACCCAGCAGTTGAGCGGGGAATCGTACCTCTGGACTACGTAATCGAAATGGATATGAATACCGAACAGAGTGGAAGAACTACTTCGGAGAAATCTGTAGATGATCTAGCTTCTGACGTCGAAAGTCATGACTCCTTTAAGCTTAAGAATGAAAGAGATGCACTTGCAGAGGAATTGAAACAAGTAAAGAGAAAGCTTGATGATGCATATAGAGAGAATACTGTCCTTCATGATAGGTCAGTTCAAGAGTACAAGCAAAATTTACAGCTTGTTCATCAGCTGTTATCACAGTATTATGCAGTTGGAGAAGCTGTGGTCACTGCCAAAGAAGAATTAGCAATTGCACAAAAATTATTAATAGAgGAGCAACAAAAAAGTCAACTTTATCTAAAGAAGGTGGAAGACATTAAGactcaaataaataaatcaggCAATAAAGCTGCGATTAAACTTTTAGATAAGATACTTCAAAAAGACACAAAAACACAACCAAATGGTTTGATACAAAAGggtAAATCTGATAATTCTGGTGATGATTTAATGCTATCATGTGCTCTGTGTCATGAAAAAATGAGGGTTTCCGACCTTGCCTCACATTCCAAAGTTTGCTGCCCAAAGGAAACAAGCAAACACCCAACCACTCCAACAACTCCAAGCCCAGAACTTCTCCGTGTTACTGTAACATGTTCTGAAACTGATGAGAAAAATGCAACATTTAAAGTTGTTACAAAGACTACTCTTGAACACTACAAATTCTCTGACTATGAGGTTCATCGAAGTGAGGGTGACTTTGTTTGGCTCCAATCAGCATTAGAGGAGTCTTGTCCTGAAAGAATAATACCGCCATTGGTTCCGCATTCTTCGTTGCATGGGAAAATGAGAGAAGTTCAGAGATTTTTGTCAAGGATTTCTGCTCACAAAGTTTTGAAAAAGCACTATCTCCTATACTTGTTTTTAACTGGTGAGGGGCAGGATGTGCAAAAAGCACGAGATGAACTTGAGAGGAAAAAGCAGAAAGACAAAGTCACAGAGCAGGAATGTTTAAGTCAAGATTGTTGTGATCAGAATGCCCCAGTTATCAAGTGTATGAGATACTTAAAgcagtttgcagaaaatcttGATGGCTTGATTATTCATCTTCAGGAAAGTTTGAACAAGAACACTATAGATGGTTCTGGTGTTTGGTTCAAATCTTTGGCAGACTTCGAACCAGCTGATACATATTTAAAGACAGCAGCAGAAGCCCTCAGCAAAATTTGTATAGAGTTAGAAAATAACCGAGAAACATCAGAAGAGAAACTTATTGTGAATGATCTGAGGAGTGTTTACCACTATGTTGAAAGTGCAGAGGGTCTTCTCGGCAGAGTGCAGACAGCAGTAGCTAGGTTTTTGCACTGGGAAGAGGAAGTCAGAGCTTATGAGCAAATGAAGAAACCCAATGAGGAAAACGAATCAGATACAGGTCATCAAACACAAAAGTGGGCAGAGGCAAATTCCAACTGTGCTGATGCCAAGAAAAACTTAGAAGATCTGTGTAAAGAGTTGTCATCAGAGCTGGCACATTTTGACTGGAGAAAAGAAGTGGAGTTGAGGGAAATATTGATTGAATACTCTGCACTTAAATCAGAGCATTTTGAAAAGGTTCAAAGTAAATGGTTTGGAGTGAAGCTAATGGTTGAGGCACCAGTAGATGCAGAGGTGCGagctatcaaatgtttggagGATACATGATCACCCATGTCAACTTTGTTAACTGCTATCCACATTTTACAAGACATAAAATATATCATTTCTATTGTGATTATTAATGCTAATTTTAGGGTAATGACATAACTTAGAGTTAAGACTtaagttttaaataaaaaacattGTCTATTAAGGCAAAATTTATGTCATCATATAAAGCCAGCCAGTGTGCAACTAACAGATGACAGTAAAAGCCAAAAATACTATTACAAtagtaaaaaaattatataaaaacCTTGATAATAGAAATCAATACAAAGATCAGGATAAGTCAGATTGGATTGATAGACGAATGTTAATGATGAAAATAAAGCAGGCTAATTTGGTGcacataaataataatatattagaGAATGAAATTTATACATATTGTGAGCCTGCAGAGCTGTGTCATTGTTTGCATCTCTCTTTTGTTATTTTGACAAGTGAGCCAGGAAATGCACAGCTTAAATCATAAATTCATTGTATAATAATTGGTAAGAAATACACCATTTTGTACTTCTAGAAAAGCGGAAATTTTTATTGAAAGATCCTTTTGAACTTGTTTCACATCA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002406 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787 all species →	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10555 all species →	SORTING NEXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0010008 all species →	Cellular Component	endosome membrane	Interproscan
GO:0034498 all species →	Biological Process	early endosome to Golgi transport	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068744932.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.