Genomic Location: chr3:30979479...30985494
NR annotation: CAH3035076.1, unnamed protein product [Porites lobata]
Species Montipora capricornis · all data for this species · gene families
| UniProt accession | Description |
|---|
| Q8C8M1 | SIN3-HDAC complex-associated factor OS=Mus musculus OX=10090 GN=Sinhcaf PE=1 SV=1 |
| Q9NP50 | SIN3-HDAC complex-associated factor OS=Homo sapiens OX=9606 GN=SINHCAF PE=1 SV=1 |
| Q5RCB7 | SIN3-HDAC complex-associated factor OS=Pongo abelii OX=9601 GN=SINHCAF PE=2 SV=1 |
| Family type | Membership / link |
|---|
| Orthogroup (gene family) | OG0006351 (this species only) |
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the
Functional Domain Search page, which searches all 148 annotated genomes at once.
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|
| K26090 | SINHCAF; SIN3-HDAC complex-associated factor | - | Chromosome and associated proteins | ko03036 | deepkoala |
Searching by KO or pathway ID across
all species is available on the
KEGG Pathway page.
Expression pattern (RNA-seq)
Transcript abundance of XP_068745072.1 across
36 RNA-seq samples of Montipora capricornis.
This gene has no row in the species' RNA-seq expression matrix, so every value below
is shown as zero — the matrix simply does not cover this transcript.
Values are TPM (transcripts per million) from the StringTie quantification; one bar is one
sample, grouped and coloured by condition, sorted by expression within each group.
36Samples
0TPM > 0
1Conditions
0.0Max TPM
0.0Mean TPM
By condition
| Condition | Samples | TPM > 0 |
Mean TPM | Max TPM | Mean, relative to max |
| Polyps |
36 |
0 |
0.00 |
0.00 |
|
Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM,
StringTie quantification over 36 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
