Genomic Location: chr3:71617486...71622593
NR annotation: XP_015777352.1, PREDICTED: uncharacterized skeletal organic matrix protein 8-like [Acropora digitifera]
Species Montipora capricornis · all data for this species · gene families
No Swiss-Prot hit above the reporting threshold for this gene.
No Pfam domain signature was recorded for XP_068746548.1 in Montipora capricornis.
No Gene Ontology signature was recorded for XP_068746548.1 in Montipora capricornis.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the
Functional Domain Search page, which searches all 148 annotated genomes at once.
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|
| K22672 | GDF3; growth differentiation factor 3 | - | Cytokines and neuropeptides | ko04052 | deepkoala |
Searching by KO or pathway ID across
all species is available on the
KEGG Pathway page.
Expression pattern (RNA-seq)
Transcript abundance of XP_068746548.1 across
36 RNA-seq samples of Montipora capricornis.
Values are TPM (transcripts per million) from the StringTie quantification; one bar is one
sample, grouped and coloured by condition, sorted by expression within each group.
36Samples
25TPM > 0
1Conditions
11.0Max TPM
2.2Mean TPM
By condition
| Condition | Samples | TPM > 0 |
Mean TPM | Max TPM | Mean, relative to max |
| Polyps |
36 |
25 |
2.22 |
11.03 |
|
Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM,
StringTie quantification over 36 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
