Detailed information of XP_068751120.1 in Montipora capricornis

Genomic Location: chr5:59250...72068
NR annotation: XP_015753627.1, PREDICTED: uncharacterized protein C7orf57 homolog [Acropora digitifera]
Species Montipora capricornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SS90Uncharacterized protein C7orf57 homolog OS=Mus musculus OX=10090 GN=Gm11992 PE=1 SV=1
A0JPQ1Uncharacterized protein C7orf57 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1
Q8NEG2Uncharacterized protein C7orf57 OS=Homo sapiens OX=9606 GN=C7orf57 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003774 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17662
all species →
DUF5524Family of unknown function (DUF5524)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040247
all species →
FamilyProtein of unknown function DUF5524Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31097
all species →
SI:DKEY-276J7.1Interproscan

 Gene Ontology
No Gene Ontology signature was recorded for XP_068751120.1 in Montipora capricornis.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_068751120.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068751120.1 across 36 RNA-seq samples of Montipora capricornis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples
0TPM > 0
1Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Polyps 36 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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