Gene detail

Detailed information of XP_068752676.1 in Montipora capricornis

Genomic Location: chr1:53582293...53626099
NR annotation: XP_022785889.1, myosin-10-like isoform X1 [Stylophora pistillata]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_068896575.1

TTAATGTCAATATCGTCGTCTTCAGTCAAATTTTACTAACGAAACTCGGAGACTGAGTTGTATCTCTGTGTGTGTGGCTTCGTCGTGTGAGAGAGCAGCTCTTGGTAGAAATTATTTTCGCAAACTTTGTAGCAAGGCTCATAGAATAGAGGAAAGACTTCCAACAAGTTGTCACAAGATGGAGATGGATGAAATGCACCGTAAAATCTTGCACGATCACCGGGACTACCTCTTAAGAAACCTGGAACCCATGAAGTTATTGCCATATTTGAACACCGTTCTAGACGAATCAGACCGTCAGGAAATAGAACAGGAGCCTACTAGAAACAGAAAGGTTGTCAAACTGTTAGATATGTTACCCAAGAGAGGGCCAGATGCTTTTGACGCGTTTATAAAAGCTTTAGAAGAAACGCAGAAGTTTATGGCTCGCTTTTTAAAGCAAGAAACAGATAAGCCTTGTTCTCACTGTGTAAAACTGGAAGAAGATCTAAAAAAGGTAAGAAGTGCGAAGAAAAAGTTGGAGGAGGACGTTCTGAAAATGAACAACGAAATTAAACAGTTCAAGGAATATCGTaaacaagaaaatcaaaaaGTACGGCAAGATCAGGAAAATTGGAAGAAATATCTCGAAGAATCGAATGGGCGGATTGCAGAAAAGACCGAGGAACATTTTCGAAAGATGACAACTCTCCAAAAGGAGAACCAAGAGCTAAGGGACGAAATAGAGCAGACAAGATGCAAAAACACACAGCTAACAAGGAAAAACGAGGCCTTAAAGAAGATGACCCACAaagatttggaagatgaaaaagggaaaggaaaaaaagttaaaGGAAATTTGGAAGCGGTGCCCAAGGGAAAAAAGAAAGCTATGGAGGAAACTGAACagttaaaatttaacaaaaaactTAATAAACAAGATGAGTCTTGTTCTCACTGTGAGAAACTGGAAGGAAAACTAAATTTGATAACTAGCGAGAGGGATTCAATGAGAGAACAGAACCAAAATTCCGATAAGGAAGTTCTGAACTTGAAGAACAGAATTAAAGAGATGAGCGAAGATAATCAACGAACAAAGAAAGAACTGCAAATCTTGAGGGAAGAACGCGAAAAGAGAGACATTGAAAAGATCCAAGAAGAAGGACAGCACATACGTAAATGGGCTCTAAAGAACATTAAGGCAAAACGAGGAGTTGTCTACACCTTCGCAACCGATTTCGGTAAGAGGATTTGGGTAAGCGGATCATCAACGCGAATAATCGCAACCAGATCTTCTGATCATAAGGGATTTGCGAAAGATCTGTTAGAAAAGGGCAGAGGAGCAGTTAGTGGAACTAAAGACGAAAAAAACTCCTGGTGGCGTGTAGACTTACCCGCTAAATACGTCTTGAACCTTACACACTACACCTTATCGCGTAGTCGGAACGATCAAGAGTCATACATCCTCAACTGGCGCCTGGAGGGCTCGCTTGATGGATATACCTGGGCAATACTGAAAGAACACAAAGATGATAGCGAGCTTAAGGCTCATCCCTACTCTTACACGTGGTCGGTCAATGGAGAGCTGGGCGCCTTTCGGTACTTCAGGATTTATCAGACGGGTAAGAACTCTTCGGATAAACATAATATCTTTCTCTCCGGAATCGAGTTGTACGGAGTGCTTTTAATGGGCAGTTAAGGTTCTAGTTATCCTCAAATCTGCAAGGTAGTACATTGTAGCGCCGAGAAAGCACTTTTCGAAATCAAAACGTCAATTTCATCCACGAGCCCAGATTTCACTCTTAAGCCAAGTATTATGAGGGACTTAACCGAGTGCCTTAAAGACCGATTTTTATGTCTTTAAACCAAGATCTCTGTTCTCAAAAGGTACCAAAGGTAACCTCGTAATAAGCCACAATCGAGCATGGAATAGAACTGTTTTGGGCATCACCAGGAGCCAAGGTAATGGTTTCATGAGCGTTAATCGAATGGTCTCCTCAAGTATGAGGGAGCGGTAAAAAGGTCAATCATTTCTCGCTGTATTTGCTGCCATTGCATAATCAGATACAGTCCATACGTTAGAtgcattgtgttgtgttgttcTGGTACCAGTTTCATCAAATGAGACTTTTCTAGATAATAGTGTTCGCAGGGTTTGAATGACATAACCACGTCCTTTCCATCATTAAATTTACAAATGATAATGTAATTATATACCCGCTTAGGATATGATCATTCTAGCTTGGAGTCGTCATAACCACAGTTCAAATTGACTCACATCTTTCACAATCCTTCATTAAACTGCTTCTAGTTACACAGCAAACTCGCAACTAGTAGCTAACTTAATAAATCAGATGGATCAGAATTTTAGCGGAGCGGGGGTGCGTTCGATCTTGTTATATCGTTCGTTTATGTGTTTGATTCGTGCGCAAGCGTGGATTTTTTTCCAAGCTTCCTTTGTAGCTCCAGCGGTTTCAATACATGAACACATAATGAGATTTCTTTCTGATTATCAGTCAACATGGTTTCAAACAATCTCGCTCATAAAGTAAACTGCTCCAACTTGCTCATGACGGGTTTCTTACCCTCGGTAAGCGTGTCTTCGGGGGAAGCAGTTTTCATAAATTCTGCAAAGGCCTTTGATAAAGCTTGGTTTTTACCAGAGacacaagcacaagcgcaagggGTGGGGGGTCTCCCacatgaaacagacggggatgctcgtcgtctcgcttaggggtataaattttggattttagtTTCGGTTAGGGTGTTCCGGATAAAGCGCCAAAATTTTaagccaccaaggtctcgtttagggttccgcgcagaaacacagaattacgcgaagagaagcagaagtcaaatttccttttaacgtgttttgtttaagggtcaaaatttgcttaagccacgcccagattggtctactttaggggtcacaaaaagctcgagccacgcccagatggtctcctttagggctTAAATTCAAAagttccgacgagcatccccggaagcaaactttgacataagcatcaaaatcaatcaCGGCAATCAAAGGTGAACTATTAAACTGGATTTTAGGTTTCTTGACTGCAAGAAAACAGAGAGTGATAATTAATGGCCATTCATCTGGTCTGGTGTTCTTTAGGGAAGCATTTTAGGACCCTACTTTTTCTTGTTTATATCAACGACTTTCCCTTGGCAACTAACTGTAACTGCAAACTCCTTGCTGACGACAGTAGCCTGTATCGGAAAATTACTTCAGAGTCCGATTGTAGAGAATTTCAAAGTGATATCCATGGTGCCTATGATTGGTGTAATTCCTGGCTCGTTACTATGAAGTGTCAAAAAGTCCAAGGTTAACGTTCtgcaaatatcaaaatcaaATGACCCATATCAGCCATATTATCATGCATGACTACTGGTTGTCTGAGAagcccttaaggaccATCTTGGTGTCTGGCTCAAGTCTTCCATTTCTTGGAATTACCACATAAATTATAACTGTGGCAAAGCAAATAGGGTGCTGGGTTTGAATACTTTTGGTccaaacaggagcccatgactaggagtgtacaacttcattgtatttgtggaacggcgtttttaaaGCCTggcttatttttagattgatattctcgcgaaaccagacctttccagctaatcacaagtatTGTAAGAGAAATTCAAGTATTACCCATAGGATCATTTGAGAATGGTCACtggtgcaagccaaatcttattaaAGAAcgcgtctaaaaatagcttgatctgtgaaaataccgttacatagacctagtattggagttgtaaGCACCTAGTCTAAACAATCCCGTGGGAGTTTCAACGGCCTTTGATTAAGACCTTTGGGCATCCGACATACTAGAATATATCTGTCAGGCCTGGACTCCTTATTTAGTTAAGCATATCAGCAGTATGGAGTCGATTCAAAGACGAGCTACTCGAGTTATTTGCGGGTCAGAAAAAACATATCAGGAAAGGCATGAGGTCCTAAACCGGCCATCGCTGGAGTTACGAAGAAAGTTTATTTGCCTAGTGCAAATATTAATAAGATTCTTTTCGGTCACTATCAACGAGCCCACGTAGAAACCTCAATTTTACGATAAGGTCTAAAAGGACACCTGCAAATTacttcaaattttcattttttaatcattataTTACAGGCTGGAACGGTATCCCATCGAATTATATGCGTTCCCTTTCATTAGTCAGTTTTAGCCCATTCCCTCCTGAGAGTGAGAGttctagattttactctggaTACAATTTTTGAAGGCACTTTAGGCGTGAATCGGTTAAGTCCTGCTTTTTAGATCATTTTGTGTCAAATGTAGAATGTCTGGCTTGCTAATGTGTGAGTGTCAGGTTAACTACTTATTTCATTTTTGCGTTCGACGAAGAAGAACGCAGTTCATAATCCTGGGTGTCCTGTGGTTTCAAGGTGACGTTTCTTTAGATTTGTCGTCAACCGTCTGCATTTtcagcgccattttgaatgacgtcaTAAGTCAGATGCGCAAAGATTATAGCGCACCTCGTAGTTTTCGCAGTAGTCTGAGCAAGTCTGAGCATTGTAAAGCGGATATCTAAAGACTACCTCGTGGTTTTCATAGTCTAATGTAGTAAAGTTAAGGAAAGCGTGACATTTAGTTTACGTGACCTGTCGAACTGTAAGTTGATAAGTAGCCCAGTTACTCGCCTGATACAAATCGGAAGTATTGTTGCTTAACCAAACGTGCAAATATGCGTTATGCTGTTTAAGTGTTGCATACACAGTTAACGTACTACATCGTGGGGCTAGTCCTTTCTTCTACTAGGATTTCATGTAGGATTCTAAACGCCTAGTTCCTGATCAGGATTTACGTATGTATCGATATGTAAGTAAGGCATTATGCTCACGTTCGAATTAGGATGTTTACTAGGACGGAAACATCATATACTCGCTCGCATATTCAAGAACCCAAATTTCGTCCCCACGATCCCACTTCATAATTAATGATAACTCCTAGTATTAGGTTAGTCTTGGTTTACCTCTTAATtttaattcttatttttttagtgTGTTTGATATTGGAGTGTAATCTTTGTAATATTTAATTGTCCTCAATTACTGTCCAGTCATGTatatttttacatgtaaagCCTACCACCAAAATTACTTTCAGTATTTTCATGTAACAAATGTTTCATAGAAGGGCTACTTTTACTGCTTTGGCGTTgttgtaaaaaataaaatgtcatTTTAGT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000763 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00619 all species →	CARD	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR001315 all species →	Domain	CARD domain	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47457 all species →	OS05G0345500 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068752676.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.