Gene detail

Detailed information of XP_068754281.1 in Montipora capricornis

Genomic Location: chr6:27223434...27395646
NR annotation: XP_044169210.1, LOW QUALITY PROTEIN: ephrin type-B receptor 1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC138051886

ATGAACCCTTGTAAATGGATTTTTATTGCCGTCCTAGCAGCGACAGTGGCAGGAGACACCGAAATCCTCCTTCGTGAACCTCCAGCTCAAGGCATCTGGCTATGGCATACTTCAGAATCTAGAATTTCAGAGGGTGGTGGGTGGAATCCACCATCAAGTATGAACATGATTTACTCTGCCTGTGATGTTTACACTACAGGAAGACCTAGAAACTGGCTTAGAACTCCCTTTATCCCACTCAGGGGTGCAAAGCTGCTGGACATTAAAATGGGTTACTTTTTGAGAAATTGCCCGTCTGATGCAAGCGCTCACTGCAAAACACATCTTGGTTTATATGTGCATCACGCTGATGGCAAGTTGCCTAATCCTGATCCTAGTGAAATGAACTATGAGTTTGTAGAAAACATTGTGCCAGAAGAGACCCTTCCAGAGCCTGGCAAAGGGAATACATTTGTATACCATGGCAAAGTGGTTGCCAAGTCAAAAGGCCTTTATCTGGCATTTAAAGATGAGGGAGCTTGCATCTCAATCCGAAACTTTACAGCTGGCTATAAATTCTGCCCTGAATGGCGCAGAGATTTTGTGATGTTTCCAAGAACTATTGCTCCAGCAGATGATGCTGATTCAGTGCAGAGAGAGGGAAAATGCAGTGACGTGAACTCTGTCAGCCAAAATAAGTCAGTTGGTGTTTGTCTCAGTAGTGGAAAATGGAACATCACTAAGGGTTCAGAGTGTCTCTGTCGTAAGGGTTATGAGCTGGTTCAGTCTTTGCCTAATTCATTTGAATGTAAAGAATGCAAAAAAGGTTTGTTCAAGAGCATTGTCAGCAACAGTGAGTGTGGTGAATGTCCTCAGCATTCTTTGCCTAACCCAACCAGAACAAGCTGTACATGCACAGATGGATTCTATGCCTTAATGCCCTTAATGCCTTGTGAAACCTTGCCCCTGGCTCCGTTGAACGCCAGTGCAAGCATGCCTACAACAACACATTTAACCATGAGTTGGATACCACGGAATAGTGTAAACAGAACACTACGATATTCCATTGATTGCTTCATGTGTGAGTCACGAAACGACACAGAGTGCCGAAAGCTTTGTGGTCCAAATGTGCAGTTTCAGCCAAGCCGAGACAATATCTTTAACGCCAGTTTAACAGTGGATGGCTTGCAGCCTGGTAGCTTTTATTTATTCAGAGTTTACTCTGTTAATGGGTTGAATAAACAGGAAAAAGACAGGGACAGATGGAAGTATGCAAGAGTGTTTGTGCGTACCAAGGACGAAACTGCCGTCCCAACAAGAAGAGGGCACCCTTCAGGTGGAGGCTTAACTTCTTCACATCTCAACATGGTTCTGTACGTCGGAATTCCAGTTGTTATTGTCCTTGTCAGCTCTGTGATTGTGTTTATTTGCATCTGCAGGGCACACAGAAGGAGAGGTTACAATTCTCCAGTAGAGATGAAGGATGGACGCGTTATTTTACCACCCCGTGGGCAACGGTTATACATAGACCCAAGTAATTACGAAGACCCAGCGGAAGCGTTGAAGGATTTTGCCAAAGAACTGGATAAAAGATGGATCAAATTGGACCAAATAATCGGAGGAGGCGAATTTGGAGACGTCTGCAAAGGATTTTTGACTCGCCCTGATGAAGAGACTATTCCTGTTGCAGTCAAAACCTTAAAGGCTGGTGCGTCAGCAATAAATCGGAAAGACTTCATGTCAGAGGCTTCCATTATGGGTCAGTTTTGCGACCCAAATGTGATATTCCTGGAGGGCGTGGTGACTTCATCTCCGCCGTTGATGATTGTAATAGAGTTTATGTCAAATGGGTCCCTCGATAACTTCCTCAAGAAAATGGATGGGAAGTTAACAGTTCAACAGCTGTTGGGAATGGCTCGTGGAGTGGCGTCGGGAATGAAGTACCTGGCTGAAATGAATTTTGTTCACAGAGATCTTGCTGCCCGCAATGTTTTGGTCTCTGAAAGTTTGGTGTGCAAAGTAGCAGATTTTGGTCTGTCCAGAGAGTTGGAAGACTCCGCTTATGAAACCAAGGGAGGTAAAATTCCCGTCAGATGGACGGCATTAGAGGCAATCGATTACCGCAAGTTTACAACTGCTAGTGATGTATGGAGCTATGGAGTGGTGCTGTGGGAGATTATGTCATTTTCTGAAAGGCCTTACTGGGATTGGAACAATTATGAGGTTATCGACCGAGTCAGGGGAGGATATCGACTTCCGCCTCCATTGGGATGTCCTAAAACCATTCATCAGATCATGCTTAACTGTTGGCACGCTGAACGCAACAAGAGACCCAAATTTACCGACATAGTGAAAAGACTGGATGTACTGATTCGCTCCCCTGACAAGCTCAATGATCTGTCCTCCGCAGAACCCAAGTCCCCGAAGCTTGATTACAGCGGTGTCACCCCAATTCACGATTGGCTGGAGAGCATTAAGATGGGACAATACAGCGCCATGTTTAGCAAAGCAGGCTTTACAAGTCTTAGCCAAGTTGCTACAGAAGACGAACTGGACCTCAATGACATGGGAATCAAACTCATCGGTCACAAGAACAAGATTCGCAAGAGCTTAAAGGAGGTGAAGAAGACATTAAGCAAAGATACAGCTTCCTAG

Transcript

rna-XM_068898180.1

CAAAGTATCGGAAGTGCGACTTTCAGCAATCGTTTTGGGATGAAAAAGTGTAAATAAGACGGATTTTCTCTTTCTCCGACATGAACCCTTGTAAATGGATTTTTATTGCCGTCCTAGCAGCGACAGTGGCAGGAGACACCGAAATCCTCCTTCGTGAACCTCCAGCTCAAGGCATCTGGCTATGGCATACTTCAGAATCTAGAATTTCAGAGGGTGGTGGGTGGAATCCACCATCAAGTATGAACATGATTTACTCTGCCTGTGATGTTTACACTACAGGAAGACCTAGAAACTGGCTTAGAACTCCCTTTATCCCACTCAGGGGTGCAAAGCTGCTGGACATTAAAATGGGTTACTTTTTGAGAAATTGCCCGTCTGATGCAAGCGCTCACTGCAAAACACATCTTGGTTTATATGTGCATCACGCTGATGGCAAGTTGCCTAATCCTGATCCTAGTGAAATGAACTATGAGTTTGTAGAAAACATTGTGCCAGAAGAGACCCTTCCAGAGCCTGGCAAAGGGAATACATTTGTATACCATGGCAAAGTGGTTGCCAAGTCAAAAGGCCTTTATCTGGCATTTAAAGATGAGGGAGCTTGCATCTCAATCCGAAACTTTACAGCTGGCTATAAATTCTGCCCTGAATGGCGCAGAGATTTTGTGATGTTTCCAAGAACTATTGCTCCAGCAGATGATGCTGATTCAGTGCAGAGAGAGGGAAAATGCAGTGACGTGAACTCTGTCAGCCAAAATAAGTCAGTTGGTGTTTGTCTCAGTAGTGGAAAATGGAACATCACTAAGGGTTCAGAGTGTCTCTGTCGTAAGGGTTATGAGCTGGTTCAGTCTTTGCCTAATTCATTTGAATGTAAAGaatgcaaaaAAGGTTTGTTCAAGAGCATTGTCAGCAACAGTGAGTGTGGTGAATGTCCTCAGCATTCTTTGCCTAACCCAACCAGAACAAGCTGTACATGCACAGATGGATTCTATGCCTTAATGCCCTTAATGCCTTGTGAAACCTTGCCCCTGGCTCCGTTGAACGCCAGTGCAAGCATGCCTACAACAACACATTTAACCATGAGTTGGATACCACGGAATAGTGTAAACAGAACACTACGATATTCCATTGATTGCTTCATGTGTGAGTCACGAAACGACACAGAGTGCCGAAAGCTTTGTGGTCCAAATGTGCAGTTTCAGCCAAGCCGAGACAATATCTTTAACGCCAGTTTAACAGTGGATGGCTTGCAGCCTGGTAGCTTTTATTTATTCAGAGTTTACTCTGTTAATGGGTTGAATAAACAGGAAAAAGACAGGGACAGATGGAAGTATGCAAGAGTGTTTGTGCGTACCAAGGACGAAACTGCCGTCCCAACAAGAAGAGGGCACCCTTCAGGTGGAGGCTTAACTTCTTCACATCTCAACATGGTTCTGTACGTCGGAATTCCAGTTGTTATTGTCCTTGTCAGCTCTGTGATTGTGTTTATTTGCATCTGCAGGGCACACAGAAGGAGAGGTTACAATTCTCCAGTAGAGATGAAGGATGGACGCGTTATTTTACCACCCCGTGGGCAACGGTTATACATAGACCCAAGTAATTACGAAGACCCAGCGGAAGCGTTGAAGGATTTTGCCAAAGAACTGGATAAAAGATGGATCAAATTGGACCAAATAATCGGAGGAGGCGAATTTGGAGACGTCTGCAAAGGATTTTTGACTCGCCCTGATGAAGAGACTATTCCTGTTGCAGTCAAAACCTTAAAGGCTGGTGCGTCAGCAATAAATCGGAAAGACTTCATGTCAGAGGCTTCCATTATGGGTCAGTTTTGCGACCCAAATGTGATATTCCTGGAGGGCGTGGTGACTTCATCTCCGCCGTTGATGATTGTAATAGAGTTTATGTCAAATGGGTCCCTCGATAACTTCCTCAAGAAAATGGATGGGAAGTTAACAGTTCAACAGCTGTTGGGAATGGCTCGTGGAGTGGCGTCGGGAATGAAGTACCTGGCTGAAATGAATTTTGTTCACAGAGATCTTGCTGCCCGCAATGTTTTGGTCTCTGAAAGTTTGGTGTGCAAAGTAGCAGATTTTGGTCTGTCCAGAGAGTTGGAAGACTCCGCTTATGAAACCAAGGGAGGTAAAATTCCCGTCAGATGGACGGCATTAGAGGCAATCGATTACCGCAAGTTTACAACTGCTAGTGATGTATGGAGCTATGGAGTGGTGCTGTGGGAGATTATGTCATTTTCTGAAAGGCCTTACTGGGATTGGAACAATTATGAGGTTATCGACCGAGTCAGGGGAGGATATCGACTTCCGCCTCCATTGGGATGTCCTAAAACCATTCATCAGATCATGCTTAACTGTTGGCACGCTGAACGCAACAAGAGACCCAAATTTACCGACATAGTGAAAAGACTGGATGTACTGATTCGCTCCCCTGACAAGCTCAATGATCTGTCCTCCGCAGAACCCAAGTCCCCGAAGCTTGATTACAGCGGTGTCACCCCAATTCACGATTGGCTGGAGAGCATTAAGATGGGACAATACAGCGCCATGTTTAGCAAAGCAGGCTTTACAAGTCTTAGCCAAGTTGCTACAGAAGACGAACTGGACCTCAATGACATGGGAATCAAACTCATCGGTCACAAGAACAAGATTCGCAAGAGCTTAAAGGAGGTGAAGAAGACATTAAGCAAAGATACAGCTTCCTAGATTTAAAAATACGCCCATTCAAAGATGCTAAGTTAAGAAGCGTCGACTTATTGTATACCCTATTATGTACCTGTGGCAAGATAGGGTGCTCGGTTATTTACAGATTCTTAGGTGATATTTCTCGTTGTCAAATCGCTCTGTAGCGAATTGATAACAAAAAGAGCAACAAAAAATTTATAAGAAGCGGCTATCTTTTTTGTTGATCTAAAGGTAAGCAAAAAAAATAGTTATTTGTGGTGTGGACCAAAGTTCTGCTGCTTTTTTCATGGAAAGTCTTTAATCCTTTATCTAAGCCATAAGCTTGGCCTTTGTACATGCCAATGCAACTTCGAATTCCGGCATTGAGAAATGTGATTTGTCCGCAATGCCTGCTCTTGGGCAGAACAGATCAGAACCTCCATTCCaattattcttggtttgcactcacgtgattacaTGGCCCTGTTGGtgtagaaaacaaaagcaaaatgtcgctcgcgtttTTGCATGATAGTAGATAATAATAGGGCCAAATAGCAAATGGACAGTTGTTCAAAGACCAGATAACTTTATGCAGTGGATAAGTCGCTATCCAAAGTAAAAGATATACTCTGCGTGAAACGATGGCAAAGGTTTTTGTACAGGTCTTTACATAGATGTGCGCAGTTGGAGGGTGCATATTCACCATTACTTGAGCAAATACTGAAATATTTGCAAAGCTTGAAACTGTCAGGTAGTGGGCCGCCAAGGACGTCAGGTGCAAGCcaatgtttattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattattatcatttctttatttattttttgtgtaACTTGAAGTACGACGCTTGAAGCGTCCCATTTTTCAACGTAGCGAAATAgctcgtttaattttgtaagAGTTTGAAGAAGAATCTGACTTTATTGAATACTGCTATTATGATACTTTACTTCGGAACTATCAATTGCCGTTTGATACTGCGGACGCATTATCCGTCTCGGGTACAAAGACATTTTTTGCGTCATCCAAGACGAACTTTTACGATTAGTTCTTCCTAAATTTTAATGATCGTGGGCTTGTCTGGGTACTAGGCGAACTATATAGATGCACTGAAAATCAtcgcccaagttcgtcccagacggaaAACGCGTCTCGTACAGTTCGTCGGATCTTtacacttgacaaacaaattgaCAAACGTATAGTTAATCCTTCTAaacgaattatgcgtcttgaGAGTTCAGGAAGTAGTGCATGTAAGTGCCTCGATTTTGATTGGGATACTACGAGATTTTCGTGTTGATTATGCGCATCAAGTATAGAGGTCCATAATATGCCTGGTTCTTGGGCCAGAACCAGATAGGTCGCTACTTTTTTATTAAGAAATGTACAATTCGTGCATATAAAGTGCAAATAGtgattttcaaatgagtgtcctaaaaccaaaactaaagtaattactttggccaatcaaaactcgaagtaattaccgtagccgacacaaagcgcgggaaaatgtgcacacgcgagccatgattggttttggtttcacttctgattggttgaaaaagtgtcgcgagaactttgagccaatcactgagtgaagtgatGCAAAGCcgaagtaattatctaattactttcgacactcaattgaaaaccactataaagtatttttttattatcagcAAACATAAAATATTGATAGAAGCCTCTTCAAAATTGCCTTAATATAGGAATAGTTATGtagtatttttctttcttgaaaagTGTAGGAACTAACCTACTACATTTAAAATGCCCTAGGgaacaaagaaaatgttgaatcTTTGTTGAACCTTAGATTTAAAACGGTTACAAGCTACATTTGATCATAGTCcatggactggttatgaaacccgaaaacttcaaaagcgagaacggTACTACTGTCGCACTTTACTTTAAGGTGACCATGCACAATCCTTTGTCCTCAGTTCAATTCGCAACTTAGTTGTTTagttgtgaataaattaatcgaaagTTTTTCTTCGTCTTTTAGAAATAGGGTGTGGTTTGAGCAtggtcagggccaaaacagcgagcaaaaacaaaaaacaacgtAACATGtcaagtttcataaccatctccatataTTAACTATGATCTGATTCAACCAGTCTTTTATTGAATGAGCTTTGTGTAACGTTGATGCTCTGCCTATGCTTTTGACACGTCGTAGAGAAAGTGCTTTGCAGTATAGGTGGTTTTCTATGGGGTTATATCCACGCCAAATTTCAACTCTCgcattttgtgtttgtttcacATGTCATCGTTGGTGTAAGCTATTCAACATTCGAGTTTCACATTTCGAAATTCGAGTTTCACTATGCAACATTCGAGTTGCGCTTTGCGGCATTACTCTCGGAAGCACTACTGCTCATTCATCACTCAACATGCAAGTCTTACCACAGAGAGCTCACACAATCTGTTTGTGTAAACGTTTATAATAAATGTATCGGATTAAAAAATAACGGCGTCCAATCAGAAAGAGGCAATCAGCAGGACAGTTTGATGCTGGCACGGGTGAATCTTGTTACGCATTTCGACCGATCGGAGAGCATggcattttgattttcttcgagggCTAGTTCCAGGCCGTTTGAAAGCAGAGCGATGCGATTTTTTTGGGAAACATCGCTGTAATGGCCGCGGAAATCttcctttatttgttttctcttaaCTCCGTTTACTCTAACCCTTTCTCCATAGAAAAGTGGATTTTTCAGAAACATCCCAAAACTAATCCATAAACCTTCACTGGATCTGTTAGGTTTTTTCCTGGGCAGTAAGTATCATATTTGCTGCGTTACGAATTTTCCGCCATATTTGCCCCCCATTCTCCTCACCCCCCGTATGAACAGcggtttttctttcgaaaggtGAAATAACTCGTGCATGTCGGAaggtaaaaagtaaaaagtgCAAAAAATGATCAAACATTTTGTGGGGAGCAAGGATGACGTAGTtttgagagcactcacctcccaccaatgtggcccgggttcgattcccaaactcggcgtcatatgtgggctgagtttgttggttctctactctgcaccgagaggttttccggtttcccctttcctcaaaaaccaacatttcacatttcacttgatttgcgttcattgttaatttcagctTACAGTGTCCTGAATTAGTGCTCCCGCGCTAAAGAACgcctagacacttaaataaagtccctCCCTCACTTGCATGATGAACGATGAATGAGCAATGGCGCGTCTGAGAGTAATGTCGCAAAGCGATACTCGAATGTAGAATTGCGAACCTCTAATGTAGGATTGTGAACTCGAATAACACGATGTTGAATCGCTAAGACCAACGATGAAATGTGAAATGCTGCTGAAGCTGAAATGCGAAAGTTGAATTTTCGCGAGAAATAACGCCATAGTTTTCATGTTACGTCgtcaccgccatgttggtttagCTCCTTTTTTTCGTTCACCAGCAATTGGACATGACGTCAGTGTTATGTGTCTCTAGAGATAAACGGCAACCCACCTATTAAAGGAATTCGCAAACGGCCAGAGAAATTGCTCTTGTTTACATTGTAAATTGGTGTGTATTGTGGTGATATAGACAGAGAAGACTGAATTGATATTGTTTGATTAGGATTCATAAATAAAATACCATTTTCTTga

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54753	Ephrin type-B receptor 3 OS=Homo sapiens OX=9606 GN=EPHB3 PE=1 SV=2
P54754	Ephrin type-B receptor 3 OS=Mus musculus OX=10090 GN=Ephb3 PE=1 SV=2
P54761	Ephrin type-B receptor 4 OS=Mus musculus OX=10090 GN=Ephb4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000240 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF14575 all species →	EphA2_TM	Ephrin type-A receptor 2 transmembrane domain	Domain	Interproscan
PF01404 all species →	Ephrin_lbd	Ephrin receptor ligand binding domain	Domain	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR001090 all species →	Domain	Ephrin receptor ligand binding domain	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR027936 all species →	Domain	Ephrin receptor, transmembrane domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050449 all species →	Family	Ephrin receptor tyrosine kinases	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46877 all species →	EPH RECEPTOR A5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005005 all species →	Molecular Function	transmembrane-ephrin receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0048013 all species →	Biological Process	ephrin receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05111	EPHB2, ERK, DRT; Eph receptor B2	EC:2.7.10.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068754281.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples

28TPM > 0

1Conditions

20.7Max TPM

8.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Polyps	36	28	8.48	20.71

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR27940191	Polyps	Polyps	not recorded	not recorded	SRP199550	20.71
SRR12904783	Polyps	Polyps	not recorded	not recorded	SRP199550	20.68
SRR12959201	Polyps	Polyps	E3 day15	not recorded	SRP199550	17.73
SRR12959203	Polyps	Polyps	E3 day15	not recorded	SRP199550	16.43
SRR12959202	Polyps	Polyps	E3 day15	not recorded	SRP199550	15.48
SRR12710846	Polyps	Polyps	OA3 day3	not recorded	SRP199550	14.23
SRR12710848	Polyps	Polyps	OA3 day3	not recorded	SRP199550	13.62
SRR12710847	Polyps	Polyps	OA3 day3	not recorded	SRP199550	13.40
SRR12959229	Polyps	Polyps	E3 day3	not recorded	SRP199550	13.04
SRR27940193	Polyps	Polyps	not recorded	not recorded	SRP199550	12.74
SRR12904782	Polyps	Polyps	not recorded	not recorded	SRP199550	12.61
SRR12904781	Polyps	Polyps	not recorded	not recorded	SRP199550	11.76
SRR12786898	Polyps	Polyps	OA3 day0	not recorded	SRP199550	10.52
SRR12786897	Polyps	Polyps	OA3 day0	not recorded	SRP199550	10.41
SRR12786896	Polyps	Polyps	OA3 day0	not recorded	SRP199550	10.11
SRR12959214	Polyps	Polyps	E3 day9	not recorded	SRP199550	9.69
SRR12959230	Polyps	Polyps	E3 day3	not recorded	SRP199550	9.48
SRR12959190	Polyps	Polyps	E3 day21	not recorded	SRP199550	9.24
SRR12959188	Polyps	Polyps	E3 day21	not recorded	SRP199550	8.34
SRR12959215	Polyps	Polyps	E3 day9	not recorded	SRP199550	7.97
SRR12959216	Polyps	Polyps	E3 day9	not recorded	SRP199550	7.87
SRR12959189	Polyps	Polyps	E3 day21	not recorded	SRP199550	7.77
SRR12959184	Polyps	Polyps	E3 day0	not recorded	SRP199550	6.99
SRR12959182	Polyps	Polyps	E3 day0	not recorded	SRP199550	6.86
SRR12959183	Polyps	Polyps	E3 day0	not recorded	SRP199550	5.40
SRR12710855	Polyps	Polyps	OA3 day9	not recorded	SRP199550	4.39
SRR12710858	Polyps	Polyps	OA3 day9	not recorded	SRP199550	4.00
SRR12710857	Polyps	Polyps	OA3 day9	not recorded	SRP199550	3.67
SRR12807381	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12849113	Polyps	Polyps	OA3 day0	not recorded	SRP199550	0.00
SRR12927880	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR12959227	Polyps	Polyps	E3 day3	not recorded	SRP199550	0.00
SRR12963484	Polyps	Polyps	E3 day0	not recorded	SRP199550	0.00
SRR27940192	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9129316	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00
SRR9613519	Polyps	Polyps	not recorded	not recorded	SRP199550	0.00

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.