Gene detail

Detailed information of XP_068754897.1 in Montipora capricornis

Genomic Location: chr6:48876559...48890868
NR annotation: XP_029213963.2, 28S ribosomal protein S9, mitochondrial-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4UZF1	Small ribosomal subunit protein uS9 OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=rpsI PE=3 SV=1
B0RN06	Small ribosomal subunit protein uS9 OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=rpsI PE=3 SV=1
Q8PD66	Small ribosomal subunit protein uS9 OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rpsI PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004062 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00380 all species →	Ribosomal_S9	Ribosomal protein S9/S16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR000754 all species →	Family	Small ribosomal subunit protein uS9	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21569 all species →	RIBOSOMAL PROTEIN S9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_068754897.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.