Genomic Location: chr7:4373924...4382967
NR annotation: XP_044181864.1, uncharacterized protein LOC122962696 [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families
| CDS |
| LOC138057983 |
| Transcript |
| rna-XM_068903884.1 |
| Protein |
| XP_068759985.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000312 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08646 all species → | Rep_fac-A_C | Replication factor-A C terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013955 all species → | Domain | Replication factor A, C-terminal | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
XP_068759985.1 in Montipora capricornis.XP_068759985.1 in Montipora capricornis.XP_068759985.1.Transcript abundance of XP_068759985.1 across 36 RNA-seq samples of Montipora capricornis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Polyps | 36 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM,
StringTie quantification over 36 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
