Detailed information of XP_068762297.1 in Montipora capricornis

Genomic Location: chr8:29950013...29998587
NR annotation: XP_029185150.2, LOW QUALITY PROTEIN: doublecortin domain-containing protein 1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
M0R2J8Doublecortin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=DCDC1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003002 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03607
all species →
DCXDoublecortinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035992
all species →
Homologous_superfamilyRicin B-like lectinsInterproscan
IPR043188
all species →
FamilyDoublecortin domain-containing protein 1Interproscan
IPR003533
all species →
DomainDoublecortin domainInterproscan
IPR036572
all species →
Homologous_superfamilyDoublecortin domain superfamilyInterproscan
IPR000772
all species →
DomainRicin B, lectin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46302
all species →
DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008017
all species →
Molecular Functionmicrotubule bindingInterproscan
GO:0030496
all species →
Cellular ComponentmidbodyInterproscan
GO:1902412
all species →
Biological Processregulation of mitotic cytokinesisInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23400DCDC1; doublecortin domain-containing protein 1-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_068762297.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

36Samples
28TPM > 0
1Conditions
10.1Max TPM
2.9Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Polyps 36 28 2.90 10.12

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM, StringTie quantification over 36 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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