Genomic Location: chr8:29950013...29998587
NR annotation: XP_029185150.2, LOW QUALITY PROTEIN: doublecortin domain-containing protein 1-like [Acropora millepora]
Species Montipora capricornis · all data for this species · gene families
| CDS |
| LOC138060428 |
| Transcript |
| rna-XM_068906196.1 |
| Protein |
| XP_068762297.1 |
| UniProt accession | Description |
|---|---|
| M0R2J8 | Doublecortin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=DCDC1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003002 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03607 all species → | DCX | Doublecortin | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035992 all species → | Homologous_superfamily | Ricin B-like lectins | Interproscan |
| IPR043188 all species → | Family | Doublecortin domain-containing protein 1 | Interproscan |
| IPR003533 all species → | Domain | Doublecortin domain | Interproscan |
| IPR036572 all species → | Homologous_superfamily | Doublecortin domain superfamily | Interproscan |
| IPR000772 all species → | Domain | Ricin B, lectin domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46302 all species → | DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008017 all species → | Molecular Function | microtubule binding | Interproscan |
| GO:0030496 all species → | Cellular Component | midbody | Interproscan |
| GO:1902412 all species → | Biological Process | regulation of mitotic cytokinesis | Interproscan |
| GO:0035556 all species → | Biological Process | intracellular signal transduction | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K23400 | DCDC1; doublecortin domain-containing protein 1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Transcript abundance of XP_068762297.1 across 36 RNA-seq samples of Montipora capricornis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Polyps | 36 | 28 | 2.90 | 10.12 |
Source: CnidoSite RNA-seq expression matrices (MCAPR_TPM,
StringTie quantification over 36 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.