Gene detail

Detailed information of XP_073227720.1 in Porites lutea

Genomic Location: chr12:19046498...19048923
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073371619.1

ATGCCATTAGATTTTTCTGATCTATGACGCCCAAAACGGAACTGACTAAGATTAATATAAttacttttcagtttaattcacAGATGAATGCGTCAGTGCGTGCTCAAGACCAATCAAGGATTTAGCGTAATGATGAGTCTTAATATTTCATATATTGTGCGGTGAAATCGAAACTGCCGCGATTCGCCTTCGCGCCCCCAGCCACTTGTCACCGATATTCGCCTCGCTGGTGAAGGAAAACGATTTTCTCGCGTGATGTGGCTGCGATTATTGAGGCGAAGATCGCGAGGATGTGGCCTTTTTCTTGGGCTGAAAATCTGCGTAATCATGAGCATGTTTATTCTCCATCACCTACTGTACAACGAGGGCAAGCTTGCTTCATCGATACCAGGATTATTACCATTGGAAAATATTCAACTAAGAACTCACATCGAAACAATTAATTACCGATTTTTAACTGCAAATACACAGACTTCATCGGCCATACTTAACAATGGCAGTTTTATAATTTCCGAACCTAATGAATTTGAAGCTGAAGAAAGAGATGCGAGTATAAAGTTTCTCTTCGTTTTGCATCATTATGAACAGCTTTCGAAGACGACAGAAAACTTACTTCAACTTGCTGCGGTCGCCAAGCAAATCGAACGCGTGATCGTTGAGCCATTTGTTCGAGATTCTAGAATGTGTGGTTTACCCTACGGATGGTCTGGAAAACTAAGAAGTGAACGTCGTAGATTTCACCCACTTTCTTTGTATTTTGATGTAAAATTCATGAACAATTTGctgaagaaatatcacatcGCGCCCATGGTAAAATTAGAAACTTTTAAACGGCATTGTCGCTCAAGCGTGACCAACACCACGATCATACATTTTCTGTACAGCGATCAATCGgagaaggaaatgaaaaagTGGTACAAAATTTCGGCTCTTGAATATCAAGACATTAAAAAACAGGCAAAATCTTCTGGTTGGTGTGAATGTAAATTTATCGACCACGCTCTCAGTCTGTCGAATCGAATTGGGGAACTTCGTATTGGAAGGCAAATCTGCGTTGATGCTGAGAAAGTCAGTAGCCTTGAGCTGTTCGAAAAGGAAATTACGAAAGGAGATAAATGCGTCGTCGTAATTCATTGGCGTGGAATCGGAAAAGATAGAACACATTTTAAACCGGAAGTTGAAGTGGATAACCGGAAATTGCTGCATTCGTTACGGTCTAGCGAACGCGTTGCGGAGAAAGCTACGAAGATCAGAGATTCAATCGGTAGAGAGTATATATCTATTCACATTCGATCTGAAAGACAGATTCAGTGGTATGATGTCGAACGACTAGCGCAGTGCGTCAGAACTTTGGTTAAAAAAGTTGAAAGTCTCaagcaaaaatataataaaacaagGGTTTTTCTCTCGTCAGACTTCACCCGATTTGGATCGGACACTCTACATTCGTTCACGGCACAAAACACTTCCttaatgaacaaattaaaacagATTAAGAGATTTTTGTACAAGGCTTTAAAACCTTTAAAGTACAATCCAAAGTCGGGCGATCCGTTAGATATGGACAGCGGTGTTGTGGCCCTCACAGAGATGAATGTGCTTACAGGGGGGTCACACTTAGTGACCATTGGCTCTGGAAATTTCCAGCAGTGGATTGTTGATGGGTTCGTGGAGAGAAAGGCTGGCACCGAACAGCAGAACAACTGGACCATAACAAGAATTTGCAATAAAGAAGACAAAGTGAACGACTACAAACCTAGATGAGTGATGTTGCCTTGGTAACTAATGATTGACACATGTTGATCCACTTGGTCTTTTTGTGTTGCTGATCTTTTCAGCCATCACTGAGTAGGGGATAGGAAAACCATGAGTGCTGTTGCAGCATCAGCAAATTCATGCCAGGTGCTGTAGCCATCACGTGCCAGCGAAAGACAAAACCATCAAATTGCTGACAAGCATTAGACTAAAAATACATCATCTCAAGTATGCACAAGGACAACtggaaaatcaaaaaaataaaaacaggtcACAGGACTTGAGAAAAGTCCTGGTCAGTTCTCTGGGGCAACTAAACCTtcttagcctgcataacaggcactggttattttttttaaaggccgCGCAAGCGGGGAGGAGGCCTCCTCTTCTTTTCTCCCCTTGCACGTCCTCTAGATTTCATCTTTTGCGCTAAAAAAAAACCGgtgcctgctatgcaggctagaagcttctttgtttgccagtttgAACAAAATCTGCGAAATTTATGATGGAACAGTAATAGAGTATTATATCTTGCAGAGTGCATAAAATGCAAACATTGTGTTTTTTGGTGTATTAtctatttgaaaaaagatgtctAAGATTTTCCTGTGCTTTCAAAGGCAGTTTAAGAATATTATTTAAAGAACAAAGGGATCCTTTGGTCC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10250 all species →	O-FucT	GDP-fucose protein O-fucosyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019378 all species →	Family	GDP-fucose protein O-fucosyltransferase	Interproscan
IPR045130 all species →	Family	GDP-fucose protein O-fucosyltransferase 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13398 all species →	GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0036066 all species →	Biological Process	protein O-linked fucosylation	Interproscan
GO:0046922 all species →	Molecular Function	peptide-O-fucosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073227720.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.