Detailed information of XP_073227828.1 in Porites lutea

Genomic Location: chr12:922196...962740
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627
all species →
UBAUBA/TS-N domainDomainInterproscan
PF12030
all species →
DUF3517Domain of unknown function (DUF3517)FamilyInterproscan
PF00443
all species →
UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940
all species →
DomainUbiquitin-associated domainInterproscan
IPR028889
all species →
DomainUbiquitin specific protease domainInterproscan
IPR018200
all species →
Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050164
all species →
FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR009060
all species →
Homologous_superfamilyUBA-like superfamilyInterproscan
IPR021905
all species →
DomainUbiquitin C-terminal hydrolase-like, DUF3517Interproscan
IPR047061
all species →
DomainUbiquitin-specific peptidase 24, ubiquitin-like domainInterproscan
IPR001394
all species →
DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006
all species →
UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0016477
all species →
Biological Processcell migrationInterproscan
GO:0016579
all species →
Biological Processprotein deubiquitinationInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11840USP9_24; ubiquitin carboxyl-terminal hydrolase 9/24EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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