Gene detail

Detailed information of XP_073227982.1 in Porites lutea

Genomic Location: chr12:14735904...14750105
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140921882

ATGAGTACATTTTCTTCGGAACAACTGAACTTGTTCAAGTTCGCCTCTGTTATTCTTGATGAATTTCCAACCGCATTGCGCCACGTATTTGTACGCTTGTGGGACACCAAAGTTGCTCCTACTCCCAAATTCAAAGCATGGGATGACTCGCTACTGGTTCGGAACATGTTCCTTAGTAAGGAGGGTGGAAAGACCAAAAGTGTGCCAACCAATAAGTCATATGAGGAGTGGGACTGCACAGCTTTGTTTGAAGCCACTCTTTATGCTCAAAGTTTTGCAGTGCCAGGTCCAGGCAGGAAAGGAAAGACCCTAGCCGATCTGTACTTGAAAGGCCATCGTTTGCCAAGAGGGGTATTCCATCCAAGTGTTACAAGCACTTCGGGCAACAACGATGAGACGTTTGCTTTAGCTTTGGATCAGCTTCGTCTGTTACGGAACAGTCTTTGCCACAACCACAGCTCAAAGATTGATAAGAAAACCTTTGATCAGTACATACAGCTATCTAAAGATGCGTTCGCAGCACTTGGACAAAGCTCTACCAGGATCGATGACATTGGAAAACTGGCGGAAGGAGACTTTCCCACAGCCAGGGTTCAACAGTTGGAACTAGAGTTAAGACAGCAGAAATTGAGGGCGATCGAGGATGGCATGTACCATATCGAAGATCAAGTCAAAGATGTCGCCTCGAATGTAAGCAGTGAGGTAGAAGATGTAAAGAAAGAAGTGAACGATGTTGGTTCACAAGTGAAAGATGTCAAAACTGAAGTGCTGGATACGCGTACAAAAATGGAAAAAGTCGAATCAGACGTCAAGAATGTTAAAACCGGAATGGACGACGTGAGGACCACGGTGGAAGATGTCGGGGTACACGTGAAAGATGTGAAAACTGGACTAGAAGATGTGACAACTTCAATCAAAGATGTCGGGTCAAACGTTAACGAAGTAAAAGCTGGACTAAAAGAATTCAAAACAGTACTGACAGATGTGAGAACAGAAATGGACGAATTAAAATCTAGTGTCGAGGATAACAAACAAGATAAGGAGGCGGTAAGCTCGAAAGGTCACGTGGTTCCTGGCCTCAATGTGCCTGATAAAATACCCCACTTTTACGGCCGTAAAAAAGAGTGCGAGGCAATTCTCGGTCATTTGACAAGTAGCAAAAGTACTCGTCTGGTCGATATTTGGGGTTCACCAGGATTTGGAAAGACTTCAATGGCAATCACCGTAGCACATCAGTTAGTGGAAAATAAGATTCCAGTATATTTTGTATCCCTACGGGAAATGAAAAGCAAAGATGAGCTCGTCTCAAAGCTGCTCAGTATTTTCGCAGATGTCAAACAAGTACCTCATATCTCCCCCTCTCACTGGCTTATTCAGCGCTTGCAACAGCTTCAGAATCCATTCGTGTTAATCTTGGATAATGCTGACGATCTCCTGGAATCTGGAGACACTGCGGTCAAAGAAGAGGTTCTCAGATTATCAAAAGACATTCTTGCCCAGTGTTGTCATATCAAGCTTCTCTTTACTACTCGTGAATCTCTAGACTATTTGAAGCATGAGGTTCCCATCCATCTCGAGAAAGTTGGAATACTGGACGAAATTTCCTCGGCCAAGTTAGTAAAATCACTGTTGCCAAGTGTATCAGAGAACGACTGTAGTAGCATACTAAAAGAGTGTGGACAGGTTCCCCTGGCCATGCGTCTGATGTGTAGCATCATGAGAGAAGAGAACGTTCCTCTTAATGAACTCTTAGAGGAGCTGAAGACTTCAACTCTTATTGAGGTTTTGGACGACGACCGTTTACCTCACTGTTCAAGATTAAAGTCTTTAATAAACACGTCTTTTCAAAGACTGTCACCCACAGAGAGGGAAGCATTCGTATCTCTGGCCGTTTTTCCTGGTAACTTTGAAGCTAAAGAAGCTAGGGCCGTAATGGGCTTAGAAAAAGCTCCAGAACGAACCAGCAAGAAAATTTTACGAGCACTGGAAGTAAAATCATTAATAGAATCCCGCGAAAATGTTTGCTCTTTCACAATTCATTCGTTACTACGATCTTTTATTGATGAGAATAAATTTTGTGACAGTGCAACTAAAACTACTTTTGACAGAGCACAACTTCGCTTTTACGGATATAACATCAGCAGCTTCGAGGATGCTAATGAAATGTTTTTTACGGGCCATTCTAATGACGCCGTTGAAAGGTTTGTAAGTCGCCGAGAAAACATCATTAAATCGCTAGCTCATGGAACAAGAAAGGACGAGCTGTACGCCAAGACGACAGAGGTGCTGTCTAAGGCAGAACTTTTTCTCTTTTCTGTTTTACATGACGAACAACTGACTTTTAACAGGCTTTATGACAATGCTGTTGAAGAGGCAAGGAGGAAGAAGCAATGTGACATCGAACGTAAACTGCTTGCTGCAAAGTCCTTTGGTTGTTTAGGTTTCTTTTTCTCAAATGAACAAAACCCTGACAGTCCCTTGCAACATAGTTTCATTGATGCTGCTGATTGTCCACCAAAACTACTCTGTTATGGTGGTATTTATCAAATTCTTTGTGGTAAGCTTGAAGAAGGAATATTGCTTATTGAGCGTTCTGTGGATCGTCTGAATAATGACTACGGTGAAAAGGTGTTTATGATTTTTGCCTACCATGTCCTTGCAGTTTGCCACAGAAATCGACAAAACGATGAAATTGCGTCATATGCCTGCAGCATTGAGAGTGAGTCTGGATCATTGTCCCCTGCATTTTGTAGTCTATTTTCAAGAGACACCCTGTCATCTAGAGAATCAAATGTGCGCTGTCTTCCAGAATCTGTTGCTGAACGAGATGCGTTCTTTTTTGCTTTGACAGCTGAATTGCTTCCTCCCCTTTACAAATCTCTCGGTGATCAGTTTGAAATGGAACTATCTGTTATCAAGAGTTCTCTTCTAAGGCTGCAAAAAGTTCTTTTGGTGATGTTTCAAGAAGGTCGTGTCCTTGCCAGGGTGTTAGAGACTTGCTGCAAAGGGTTAGAGAGATTAGATTGTGATAAGGAAGCAGAAGAAGGCTTTGAGTTAATAGCTCGTCAACTGGAAGATGTCTTGGGAGTCCACAAGGACACGGCCCGAAATTACCACTCACTCGGTGAGGCGCAAAAAAATTTCAAGGAGTACGAGGCTGCCCATTGTTCCTTTAAGAAAGCTCTAGAAATGAGAACCAGTATTCTACGAGAAACGAAGGAAACGGCGCATGACAGTTCTATAATTAAAGGGACTATTGAATCATTGATTTCGCTCACGCAAGTCTTTGAAAATATTAATGGTACTACTGCTGATGTAGACAATTTCGTTACCGCTTGTAAAGAACTTGAACGTATCCTAGTTAAGTCAAAAGATGAATACTTTGCTCAGGCATGTTTCGTAAGACTCGGAAGAGTTTTCCATCAAATAGGAATTACCTACTACAAAATGTGCAGGTACGAGGAGGCTGTTAAACAATTTCAAAAGGCCGTCGAGTTACGAAAAGAGTTGCTTGGTGACCATACGGAGACGGCCTTAAGCTTGAAATGTCTCAGTGATTCACAACACGCTTCAGGCGACGTTACCGAAGCTGCCGAAACCTTACAGCAGCTGGTTTGCACCCATAAAGCCCTGGATGACCACGAAAATACGGCGAGGGGGTACTATAAAATTGGACAGTTGCGACGTGAAATGGGAGATCTCAGTGGCGCACTGACGGCTGTTCAAATGGCTTTGCGATCAAGAAATGAACTTTCATGGATTCACCCCGAAACTGCAAGTTACATTCATTTTCTTGGAGTTATTAGTTTCGAAATGGGTGATCATAAGGCAGCTGCTGAAGAACTCCAGAGAGCGGCATCCATGAGAAGACAACTACTTGGTGAACACGAAGCTACGGCATGTAGCTACCACTGCCTTGGTGTAGCACAGATTTACATGGAGGACTACGATGAGGCTTTGATTTCCCTGCAAAAGGCCTTAGACATGAGAAAAAAACTATTAGGGGCTCATGCCGAAACCGCCAGAACCTTTAACAGTCTGGGTAATTTGCATTTGACAATGGGTGCCGTTAATTTAGCTTTTGAGGCATTGCAAAATGCGGCGTACATAAGAGCACATATCCTTGGTGATCACAATGATACGGCCACCAGCTATCTGAAGCTCGGTGCAGTGCAGTTGGAAATTAGAGATCTTAATGGAGCCTTCGAGTCTGTCCTGAAGTCCTTGCAAATTAGGCAGAAACTTTTGGGAGATCACTCGGACACAGCCACGAGCATCCATGTTCTAGGGCGTGTTTATCGTGCGATGAATGACAACAAGTTGGCTCTTGAGAAATTCCAGACAGCACTAAATATGAGGTCAAAACTGCTTGGTAAGCATGAAGATACGGCGTACAGCTACTTTTATCGTGGTGAAGTGCAGATGGAAATGGGAGATTTTAAAGAGGCTGTCGAGTCTTTTCAGAAGTCACTACAATTAAGGCAGGAACTGTTAGGAAACCATATTGATACCGCTGAAAGTTTTCTTTCCCTCGCACTTGCATATTGTGCGTTAGGTGATAAGATATCTTCGCTGAGGGCTTTCCAAAAAGCGTTCGACTGCATGTCTCACCTGCTTAGCTGTCATGACAATACGGCGTACAGCTACCAATCGCTTGCTGAGCTACAAGACATTGTTCAGGAACTTAACGGGGAGATAGAATCGTGCATAAAAAGCCTTTGA

Transcript

rna-XM_073371881.1

TATCGTATTTATCGTGCAAGGTAAGTTAATATCAAAAGGAGCAACACTTTAAATgcgtttcatttcttttttagatGTTCCTTTGAGTGAGATGTAGCTTCCAACCCGAGCTGTCACTGAATTACTTTGTTGCCGATCATGAGTACATTTTCTTCGGAACAACTGAACTTGTTCAAGTTCGCCTCTGTTATTCTTGATGAATTTCCAACCGCATTGCGCCACGTATTTGTACGCTTGTGGGACACCAAAGTTGCTCCTACTCCCAAATTCAAAGCATGGGATGACTCGCTACTGGTTCGGAACATGTTCCTTAGTAAGGAGGGTGGAAAGACCAAAAGTGTGCCAACCAATAAGTCATATGAGGAGTGGGACTGCACAGCTTTGTTTGAAGCCACTCTTTATGCTCAAAGTTTTGCAGTGCCAGGTCCAGGCAGGAAAGGAAAGACCCTAGCCGATCTGTACTTGAAAGGCCATCGTTTGCCAAGAGGGGTATTCCATCCAAGTGTTACAAGCACTTCGGGCAACAACGATGAGACGTTTGCTTTAGCTTTGGATCAGCTTCGTCTGTTACGGAACAGTCTTTGCCACAACCACAGCTCAAAGATTGATAAGAAAACCTTTGATCAGTACATACAGCTATCTAAAGATGCGTTCGCAGCACTTGGACAAAGCTCTACCAGGATCGATGACATTGGAAAACTGGCGGAAGGAGACTTTCCCACAGCCAGGGTTCAACAGTTGGAACTAGAGTTAAGACAGCAGAAATTGAGGGCGATCGAGGATGGCATGTACCATATCGAAGATCAAGTCAAAGATGTCGCCTCGAATGTAAGCAGTGAGGTAGAAGATGTAAAGAAAGAAGTGAACGATGTTGGTTCACAAGTGAAAGATGTCAAAACTGAAGTGCTGGATACGCgtacaaaaatggaaaaagtcgAATCAGACGTCAAGAATGTTAAAACCGGAATGGACGACGTGAGGACCACGGTGGAAGATGTCGGGGTACACGTGAAAGATGTGAAAACTGGACTAGAAGATGTGACAACTTCAATCAAAGATGTCGGGTCAAACGTTAACGAAGTAAAAGCTGGACTAAAAGAATTCAAAACAGTACTGACAGATGTGAGAACAGAAATGGACGAATTAAAATCTAGTGTCGAGGATAACAAACAAGATAAGGAGGCGGTAAGCTCGAAAGGTCACGTGGTTCCTGGCCTCAATGTGCCTGATAAAATACCCCACTTTTACGGCCGTAAAAAAGAGTGCGAGGCAATTCTCGGTCATTTGACAAGTAGCAAAAGTACTCGTCTGGTCGATATTTGGGGTTCACCAGGATTTGGAAAGACTTCAATGGCAATCACCGTAGCACATCAGTTAGTGGAAAATAAGATTCCAGTATATTTTGTATCCCTACGGGAAATGAAAAGCAAAGATGAGCTCGTCTCAAAGCTGCTCAGTATTTTCGCAGATGTCAAACAAGTACCTCATATCTCCCCCTCTCACTGGCTTATTCAGCGCTTGCAACAGCTTCAGAATCCATTCGTGTTAATCTTGGATAATGCTGACGATCTCCTGGAATCTGGAGACACTGCGGTCAAAGAAGAGGTTCTCAGATTATCAAAAGACATTCTTGCCCAGTGTTGTCATATCAAGCTTCTCTTTACTACTCGTGAATCTCTAGACTATTTGAAGCATGAGGTTCCCATCCATCTCGAGAAAGTTGGAATACTGGACGAAATTTCCTCGGCCAAGTTAGTAAAATCACTGTTGCCAAGTGTATCAGAGAACGACTGTAGTAGCATACTAAAAGAGTGTGGACAGGTTCCCCTGGCCATGCGTCTGATGTGTAGCATCATGAGAGAAGAGAACGTTCCTCTTAATGAACTCTTAGAGGAGCTGAAGACTTCAACTCTTATTGAGGTTTTGGACGACGACCGTTTACCTCACTGTTCAAGATTAAAGTCTTTAATAAACACGTCTTTTCAAAGACTGTCACCCACAGAGAGGGAAGCATTCGTATCTCTGGCCGTTTTTCCTGGTAACTTTGAAGCTAAAGAAGCTAGGGCCGTAATGGGCTTAGAAAAAGCTCCAGAACGAACCAGCAAGAAAATTTTACGAGCACTGGAAGTAAAATCATTAATAGAATCCCGCGAAAATGTTTGCTCTTTCACAATTCATTCGTTACTACGATCTTTTATTGATGAGAATAAATTTTGTGACAGTGCAACTAAAACTACTTTTGACAGAGCACAACTTCGCTTTTACGGATATAACATCAGCAGCTTCGAGGATGctaatgaaatgttttttacggGCCATTCTAATGACGCCGTTGAAAGGTTTGTAAGTCGCCGAGAAAACATCATTAAATCGCTAGCTCATGGAACAAGAAAGGACGAGCTGTACGCCAAGACGACAGAGGTGCTGTCTAAGGCAgaactttttctcttttctgtttTACATGACGAACAACTGACTTTTAACAGGCTTTATGACAATGCTGTTGAAGAGGCAAGGAGGAAGAAGCAATGTGACATCGAACGTAAACTGCTTGCTGCAAAGTCCTTTGGTTgtttaggtttctttttctcaaaTGAACAAAACCCTGACAGTCCCTTGCAACATAGTTTCATTGATGCTGCTGATTGTCCACCAAAACTACTCTGTTATGGTGGTATTTATCAAATTCTTTGTGGTAAGCTTGAAGAAGGAATATTGCTTATTGAGCGTTCTGTGGATCGTCTGAATAATGACTACGGTGAAAAGGTGTTTATGATTTTTGCCTACCATGTCCTTGCAGTTTGCCACAGAAATCGACAAAACGATGAAATTGCGTCATATGCCTGCAGCATTGAGAGTGAGTCTGGATCATTGTCCCCTGCATTTTGTAGTCTATTTTCAAGAGACACCCTGTCATCTAGAGAATCAAATGTGCGCTGTCTTCCAGAATCTGTTGCTGAACGAGATGcgttcttttttgctttgacagcTGAATTGCTTCCTCCCCTTTACAAATCTCTCGGTGATCAGTTTGAAATGGAACTATCTGTTATCAAGAGTTCTCTTCTAAGGCTGCAAAAAGTTCTTTTGGTGATGTTTCAAGAAGGTCGTGTCCTTGCCAGGGTGTTAGAGACTTGCTGCAAAGGGTTAGAGAGATTAGATTGTGATAAGGAAGCAGAAGAAGGCTTTGAGTTAATAGCTCGTCAACTGGAAGATGTCTTGGGAGTCCACAAGGACACGGCCCGAAATTACCACTCACTCGGTGAGGcgcaaaaaaatttcaaggaGTACGAGGCTGCCCATTGTTCCTTTAAGAAAGCTCTAGAAATGAGAACCAGTATTCTACGAGAAACGAAGGAAACGGCGCATGACAGTTCTATAATTAAAGGGACTATTGAATCATTGATTTCGCTCACGCAAGTCTTTGAAAATATTAATGGTACTACTGCTGATGTAGACAATTTCGTTACCGCTTGTAAAGAACTTGAACGTATCCTAGTTAAGTCAAAAGATGAATACTTTGCTCAGGCATGTTTCGTAAGACTCGGAAGAGTTTTCCATCAAATAGGAATTACCTACTACAAAATGTGCAGGTACGAGGAGGctgttaaacaatttcaaaaGGCCGTCGAGTTACGAAAAGAGTTGCTTGGTGACCATACGGAGACGGCCTTAAGCTTGAAATGTCTCAGTGATTCACAACACGCTTCAGGCGACGTTACCGAAGCTGCCGAAACCTTACAGCAGCTGGTTTGCACCCATAAAGCCCTGGATGACCACGAAAATACGGCGAGGGGGTACTATAAAATTGGACAGTTGCGACGTGAAATGGGAGATCTCAGTGGCGCACTGACGGCTGTTCAAATGGCTTTGCGATCAAGAAATGAACTTTCATGGATTCACCCCGAAACTGCAAgttacattcattttcttggagTTATTAGTTTCGAAATGGGTGATCATAAGGCAGCTGCTGAAGAACTCCAGAGAGCGGCATCCATGAGAAGACAACTACTTGGTGAACACGAAGCTACGGCATGTAGCTACCACTGCCTTGGTGTAGCACAGATTTACATGGAGGACTACGATGAGGCTTTGATTTCCCTGCAAAAGGCCTTAGACATGAGAAAAAAACTATTAGGGGCTCATGCCGAAACCGCCAGAACCTTTAACAGTCTGGGTAATTTGCATTTGACAATGGGTGCCGTTAATTTAGCTTTTGAGGCATTGCAAAATGCGGCGTACATAAGAGCACATATCCTTGGTGATCACAATGATACGGCCACCAGCTATCTGAAGCTCGGTGCAGTGCAGTTGGAAATTAGAGATCTTAATGGAGCCTTCGAGTCTGTCCTGAAGTCCTTGCAAATTAGGCAGAAACTTTTGGGAGATCACTCGGACACAGCCACGAGCATCCATGTTCTAGGGCGTGTTTATCGTGCGATGAATGACAACAAGTTGGCTCTTGAGAAATTCCAGACAGCACTAAATATGAGGTCAAAACTGCTTGGTAAGCATGAAGATACGGCGTACAGCTACTTTTATCGTGGTGAAGTGCAGATGGAAATGGGAGATTTTAAAGAGGCTGTCGAGTCTTTTCAGAAGTCACTACAATTAAGGCAGGAACTGTTAGGAAACCATATTGATACCGCTGAAAGTTTTCTTTCCCTCGCACTTGCATATTGTGCGTTAGGTGATAAGATATCTTCGCTGAGGGCTTTCCAAAAAGCGTTCGACTGCATGTCTCACCTGCTTAGCTGTCATGACAATACGGCGTACAGCTACCAATCGCTTGCTGAGCTACAAGACATTGTTCAGGAACTTAACGGGGAGATAGAATCGTGCATAAAAAGCCTTTGAGTTTACTGGTGTATAAATAGCTGCTATATTAATGTCCAAGTGGATGTTATTGAACACTATTGACTCTTTGACTCTATGAATGGAACCCCTTTTTTGTTTGTACGTACATTAGTGCCACAGTTTACGTTTTAGACGAAACTAAACCCATAAACAAAGTTGGAACATGGCATGAGTACCTTGACTGATTTCACGTAAGTAAAGGTACCAATGTAATTTAAATGAGTCATTTTCTTGGTAGAAACTTGAGCTAAAGTTGAATGCGAACCGTCTTGTTTCAAAAACTACCCAATACAGCATTTAAGAATAATTTAACATTGTAACAAGCACTGTAATTGGTTGCCGCTCCTGCATCTGACTGGCCAATTTTCACCCCAcagacgaattatccgtcttCAGAATTCGTCAAAACAGGCGCATTATTCTTCCAAAACGACCTCTGGCGCATTATTAGCACGGATTATTTGCCTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13401 all species →	AAA_22	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR049945 all species →	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19959 all species →	KINESIN LIGHT CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073227982.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.