Gene detail

Detailed information of XP_073228731.1 in Porites lutea

Genomic Location: chr13:22290167...22323667
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140922644

ATGGAGGGAAGTATTGATCGTAAACAGCTCCGAGATCTTATCCGAAGACAAAGAAGAGAATCGGAGGGCCAGTTAGACGCCACTCCAGATGTAGAATTCACCTATAACGATGCGGACAAAAAATCTGCCGAGATTGCCGAGCTGTACAGCTACACTGAAGAAAGTGAATTTAAGTTTAATCGAGAAGCGTTTGAGAAAACTCTGTTTTCACAAGGTTATGAAAAATGGATCACAATGAAGAAAAACGAGAAGAAGAAGTTTTTGTTTCTCATTATGGAGAAATGTGAAGCAGTTGACCCTGATGTTAGACTTAAAGCAGCAAGAGTATTACTTTATCTCGTACAAGGAAATTTTGGTGAAGTTAGCGATGAGGAAGAACAGAGAGAATGGTCTCAGTTGAATGTCTTCTTCCTTTACAAAAATGGTATAATGCCTCTCCTTATTCAGCTTCTGAATGTAGAAATCGAGAATTCTCATGCAGCTTTATCAGCTTTGCAGAAACCGACAGTGTCCACGGCGGACAGTGTAACACTCAGAGTATACCTGAATATTATCTACACGATGGTCGAGACCATGCGTTACGCTGACCCAGGTGACTGCGAGGAAATGGCTCAAGCTCAAGAGGCTTTCTTTACTGAGTTAACTCAGCCAATGGGAGGCGATGAACTTTTGCCAATCCTCTTGCTGGAAATGGTGCTGAAATTTTGCGCTGGTAACTGTCCACATTTTCCAATCAAAAAAATTCTTCTGCTGCTCTGGAAAACAATTTTGGTTTCTCTGGGTGGAATAGAAGAACTGGCAAAGAGAAAGGAAGAAGTCAGAGTAGCTTGTGGCTTGCCGGCGAGTTACGAGTTACAATGCCCGCCGCAACAACCCATCGACAACGAGAGAATTCCCGCCCCACACACCCCTCCCCCAGGATCGGATAGTGACAGCAATGGTGAAATTATATGGGACAGGAGCGAGGAGGAACCACAGGAACAGCGGCACAGGCCGCCCAAACCACGGCCTAAAGTCAGACAAAAAGATGTTGATATTTTTCTGGATAATACTAGGAACAAGTTCGTTGGTTTTCAGTTGAGAGGCGACTCTCACACAATCGCGGGTCTTCCTGGGCCGATACATGAAGGACTTTCAATTCTCAAAAAGCATATGTATGTCTCGCTTTCTGAGATTCAGATCAAAGACGAAGAGGAGGCCTCCAACAGACCTTTCACTAAGGGAAAAATCGACGTTCCTTCAAATTCTGTGGAACAGTTGTACGAAGCAATGCTACCTAATTTACCTCAATACATGATCGCCTTGCTTAAGATTCTTCTCGCTGCTGCCCCTACTGCTAAAGCTAAAACTGAGTCTATAAACATACTGGCAGACGTGTTGCCTGAGGATATGCCTTCATCGGTTCTTCATTCCATGAGATTAGGAATTGATGTTAATAGACACAAGGAGATCATAGTGAAAGCCATTTCAGGGGTGCTGTTTCTTTTGTTAAAGCACTTTAAGCTGAATCATATATATCAGTTTGAATTCATGAGCCAGCATCTTGTGTTCGCCAACTGTATTCCTCTAATCTTGAAGTTCCTAAATCAGAACATCTCCGCGTTCATTGCGGCCAAAAACACCATTCCACAGCTCGATTTTCCAGCCTGTATCTTGGGTGACCCCTTGGAATTAACCGCCGAGAGTCTGGAAAATGCTGATCAAGAGGCCTGCTGTTGGAGGAACTTGTTTTCTTGTATCAATCTTGTGCGGGTACTGCAGAAACTTACGAAATGGAAACATTCGCGAACAATGATGCTGGTTGTGTTCAAGTCTGCGCCGATATTGAAGCGCGCTTTAAAGGTCAAACACGAACTTCTTCAACTGTATGTGCTAAAGCTGCTGAAGGCCCAGACAAAGTATTTAGGGAGAAATTGGCGGAAGAGCAACATGAAGACCATGTCGGCGATTTATCAAAAAGTGCGCCATCGTCTTAATGACGACTGGGCTTATGGCAACGATCTCGATGCGCGCCCGTGGGATTTCCAGGCAGAGGAATGCGCTTTGCGCGCATGCGTAGATCGCTTCAACAGCAGAAGATATGGTTTTGACAACGGAGAACGCTTGGGTGATAACAGCGAGGAGGATGAATATCAACCAGTTGATAACGATGTTCTGAGCGTGCTCGGAGGAAAGGTTGAGCTCAGCAGTGAGTTCAAGAACAATTATGAACGATGGCTTGACCGTGAGGTCTTTTCGGTATCAATAGACTGGGACCAACTTTGTACATGCGTGCAATAA

Transcript

rna-XM_073372630.1

TTGTAGTTTTCAAGATGGAGGGAAGTATTGATCGTAAACAGCTCCGAGATCTTATCCGAAGACAAAGAAGAGAATCGGAGGGCCAGTTAGACGCCACTCCAGATGTAGAATTCACCTATAACGATGCGGACAAAAAATCTGCCGAGATTGCCGAGCTGTACAGCTACACTGAAGAAAGTGAATTTAAGTTTAATCGAGAAGCGTTTGAGAAAACTCTGTTTTCACAAGGTTATGAAAAATGGATCACAATGAAGAAAAACGAGAAGAAGaagtttttgtttctcattATGGAGAAATGTGAAGCAGTTGACCCTGATGTTAGACTTAAAGCAGCAAGAGTATTACTTTATCTCGTACAAGGAAATTTTGGTGAAGTTAGCGATGAGGAAGAACAGAGAGAATGGTCTCAGTTGAATGTCTTCTTCCTTTACAAAAATGGTATAATGCCTCTCCTTATTCAGCTTCTGAATGTAGAAATCGAGAATTCTCATGCAGCTTTATCAGCTTTGCAGAAACCGACAGTGTCCACGGCGGACAGTGTAACACTCAGAGTATACCTGAATATTATCTACACGATGGTCGAGACCATGCGTTACGCTGACCCAGGTGACTGCGAGGAAATGGCTCAAGCTCAAGAGGCTTTCTTTACTGAGTTAACTCAGCCAATGGGAGGCGATGAACTTTTGCCAATCCTCTTGCTGGAAATGGTGCTGAAATTTTGCGCTGGTAACTGTCCACATTTTCCAATCAAAAAAATTCTTCTGCTGCTCTGGAAAACAATTTTGGTTTCTCTGGGTGGAATAGAAGAACTGGCAAAGAGAAAGGAAGAAGTCAGAGTAGCTTGTGGCTTGCCGGCGAGTTACGAGTTACAATGCCCGCCGCAACAACCCATCGACAACGAGAGAATTCCCGCCCCACACACCCCTCCCCCAGGATCGGATAGTGACAGCAATGGTGAAATTATATGGGACAGGAGCGAGGAGGAACCACAGGAACAGCGGCACAGGCCGCCCAAACCACGGCCTAAAGTCAgACAAAAAGATGTTGATATTTTTCTGGATAATACTAGGAACAAGTTCGTTGGTTTTCAGTTGAGAGGCGACTCTCACACAATCGCGGGTCTTCCTGGGCCGATACATGAAGGACTTTCAATTCTCAAAAAGCATATGTATGTCTCGCTTTCTGAGATTCAGATCAAAGACGAAGAGGAGGCCTCCAACAGACCTTTCACTAAGGGAAAAATCGACGTTCCTTCAAATTCTGTGGAACAGTTGTACGAAGCAATGCTACCTAATTTACCTCAATACATGatcGCCTTGCTTAAGATTCTTCTCGCTGCTGCCCCTACTGCTAAAGCTAAAACTGAGTCTATAAACATACTGGCAGACGTGTTGCCTGAGGATATGCCTTCATCGGTTCTTCATTCCATGAGATTAGGAATTGATGTTAATAGACACAAGGAGATCATAGTGAAAGCCATTTCAGGGGTgctgtttcttttgttaaagCACTTTAAGCTGAATCATATATATCAGTTTGAATTCATGAGCCAGCATCTTGTGTTCGCCAACTGTATTCCTCTAATCTTGAAGTTCCTAAATCAGAACATCTCCGCGTTCATTGCGGCCAAAAACACCATTCCACAGCTCGATTTTCCAGCCTGTATCTTGGGTGACCCCTTGGAATTAACCGCCGAGAGTCTGGAAAATGCTGATCAAGAGGCCTGCTGTTGGAGGAACTTGTTTTCTTGTATCAATCTTGTGCGGGTACTGCAGAAACTTACGAAATGGAAACATTCGCGAACAATGATGCTGGTTGTGTTCAAGTCTGCGCCGATATTGAAGCGCGCTTTAAAGGTCAAACACGAACTTCTTCAACTGTATGTGCTAAAGCTGCTGAAGGCCCAGACAAAGTATTTAGGGAGAAATTGGCGGAAGAGCAACATGAAGACCATGTCGGCGATTTATCAAAAAGTGCGCCATCGTCTTAATGACGACTGGGCTTATGGCAACGATCTCGATGCGCGCCCGTGGGATTTCCAGGCAGAGGAATGCGCTTTGCGCGCATGCGTAGATCGCTTCAACAGCAGAAGATATGGTTTTGACAACGGAGAACGCTTGGGTGATAACAGCGAGGAGGATGAATATCAACCAGTTGATAACGATGTTCTGAGCGTGCTCGGAGGAAAGGTTGAGCTCAGCAGTGAGTTCAAGAACAATTATGAACGATGGCTTGACCGTGAGGTCTTTTCGGTATCAATAGACTGGGACCAACTTTGTACATGCGTGCAATAACCTGGCTCGATAACGGTAAAATAATTCTACCTGAAGGAGGGTGGACACTTTATGACGCCTACACAATGTAGCAGTAGCTCTTAGTGAGCTGTAGTGTTTAGGGTTACAAAAGGTAGTGAATTATGTGCTGTATAGGCTTCAGACTGCGTCTCCGACAGGACTACTCACTAGTTTTCATTTCAGTGGAACTGCCGGTCTTTTATCAGGCCCTTCATCATATTGTTATCTGAGAAATTGTCCTGAtcccatcattattttttgtatgaCTGAATATATGATCCtgaaaatgcaaattaaaattaacttgACCT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07923 all species →	N1221	N1221-like protein	Family	Interproscan
PF11882 all species →	DUF3402	Domain of unknown function (DUF3402)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012486 all species →	Domain	Far11/STRP, N-terminal	Interproscan
IPR040185 all species →	Family	Far11/STRP	Interproscan
IPR021819 all species →	Domain	Far11/STRP, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13239 all species →	PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073228731.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.