Gene detail

Detailed information of XP_073228778.1 in Porites lutea

Genomic Location: chr13:5709571...5731714
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073372677.1

TCAGACTAGCCGGATATGACGTCATGTAACCAGTCTCGAAACAGATGGTTATGGTGGTGGAAGAAGATGGCGGTCAGCGACAGGGACGAAATGTTCCTTCAAAGTGAATTTGAAGGTCCTATTTTGCCCTGGGATCGCTTCAGAAGATGGGTGACTTGCTTTTGCGTTGTAACATTTGATTTAGAGCTTGGACAAGCGTTAGAGCTTGTTTACCCGGCACACATTGAACTGACTGATCGCGAGaaaacaagCATTTGTTATCTGGCATTTCCTGATTCAAATTCAGGATGTATGGGGGACACTCAATTTCATTTCCGCATTCGATGTAGCCCTCGCAGTTGTCGCAAAAGCCGACTTGTTTCACAATATGAAAATGAAGTTCCTTTGTCTTACAGGAGTGATCCTGCGCATTTTTATGGTTTTGCTTATTTCCGTCAAGTGAAAGACCCAAGTATACAAAGAGGTTATTTTCAAAAGTCAGTTGTTTTAATTTCACGGCTACCTTATGTCAACCTGTTTTCTGAGGTGGTTCAGCTTATAGCACCAAGCTACTTTGAAAATGGGGAACTCAGTTTAGAGACAGTATGTCATGACATTGATCAATGGCCATTCCCTGAAGCAGGTCACACATTACAGCTACCTTTGATGGGCAATGTTATGCAGGTGAGAGTTCCCTCCAGAGGAGACAAACCAGGAGCAGTTTCTTCACCGGACAATCCACTTGTCACTCATATTGTAcCTCAAATGCCTTCACCCAAGGTCATCCCAGCTCTAAAGGATCCAGATATATTTAGgagtCTTCAGACTGTTCTTCCACACATTCATCTTTTATGGGAATTAGCACTTACCAATGAGCCCCTTGTTGTGATGGCACCTTCACCTACAATCTGCTCTGAGACCGTCCAAGCTCTTACAAGTCTGATCTCTCCACTTCACTACTGCTCCGACTACAGACCTTTTTTCACAATCCATGATACAGAATTTAAAGAATACACCACGAGAACGCAAGCTCCaCCTGGAGTCATTCTGGGAGTAACAAATCCTTTCTTTGCCAAAACTCTTCAACACTGGCCACATATGGTTAGAATAGGAGAAATGTCAAATCTCGtGATATCATCAAGAAAGTCACCAGGTGTTGGCCAAAATTCGAAAAGAACATTGTCGTCAAAGCCAGGAATCTATACAAAGTACAAGCAATTATTAGCAAAGGACAAACTTATTTTCAGAAGACTTAGCAAGGGAAATCATCCAAAGCGTCCACCAGAAGTGCAGAATGCTATACTGAGGAGACACATGGTAGAACTTACACAAAGCTTCATGATTCCGCTGGAAAGATATGTTGCCAGTCTCATGCCCTTACAGAGAAGCATATCTCCCTGGAAGCATCCTCCAAGCTTAAAACCTTTTGACGCTGACGAGTTTTTGAGAACACTGGAACACTCAGGCCCTCAGCTGACGTCCAAGCTGAAAGGGAACTGGATCGGACTTTACAGaaaattcttcaaatccgcCAACTTCGAGGGCTGGCTTCGTCATCGAGAGCGAGAAATTCGACAGAAGCTGGAACTTCTGCACCTAGAGACACTGGGGAAAGCTGATGTTTTAGTTTGGATCAAAGACAAACATGAGGTAGAGAAAGTGGATTTGTACTTACAGATCAAAGAGAAGCTGGCTGGTTCAGCCTCTTTTTACCCTCCTGTAAGCCACGAGATCAAGCACCAACTCAGAGAACACCTAGTTTCAATCACCAAGAACCTTCCAGAAGATCTCCAGTATGTTTTGAAGAATAGCTGACAAAGGATCCAAGTCAAGTTTAGCTGCCTTAAGTCAAGTAAGGAATTAGGGTGGAAACCTTTTCCAGTCAAAGACAATAGTTGTAACTTTTCGTTAGCTACCACCAATTCCTGGCGTTTTGGATGGATGCGTACGGAATCTTCGTCTGTTTTGCGTGGAAAGAGGTTACTAACGGGAGTGAAAGTTGGCCAAAGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09794 all species →	Avl9	Transport protein Avl9	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR018307 all species →	Domain	AVL9/DENND6 domain	Interproscan
IPR024224 all species →	Family	DENND6	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13677 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0055037 all species →	Cellular Component	recycling endosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073228778.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.