Gene detail

Detailed information of XP_073229130.1 in Porites lutea

Genomic Location: chr13:8898397...8910682
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073373029.1

ATTTGGTCGATGTTACGTAGCACGAAATGGATACCGTAAACATCGGAGCGGTTTGTCtaaaaagtttcattttcatctgGTTTGAATCTTGTGTTGATTCCGAGCAACAAAGCCGGCTATTGTGTTTGCTGTGCAGGCAAACAAAATGGTTGAATCAAGAAGAACACAGCTTAGAAAAAGATTTTGTGGAAAAACCGGCAGTGTCTTGTCCATGCTATTCATGACCAGCTCGTTTTTCTTGGTAGAAATTATTGTTGGTTATGCGACGAATTCGATGGCTCTTGTGGCTGATTCGTTTCATATGTTATCCGACATCATGTCACTTATAATTGGCTTTTTCGCTTTGAGATACTCCAAACGTAGTCAGAGAACGGAACGAAACACTTTTGGTTGGCAAAGAGCAGAGGTGCTCGGTGCTTTGGTGAACGCTGTGTTTCTGATCGCGCTTTGTTTCTCGATTCTGGTCGAATCACTAAAGCGACTCGTGGAAACTGAGGCGATTCACAATCCCGTCTTGGTCCTGATCGTTGGTTCTCTTGGCCTGCTCATAAATGTTGTcggtttggttttgtttcatcAACATGGGCATGGTCACAGCCATGGTGGCCATGGACATAGCCACGGTGGTAGTGTTCAAAATGGCACTGAATTGAATGAGCTAATTCAAGTGCAAAATGGTTCGAACGGAGTCGATCAAAAATCTACCGGAAGTCAATCAGGATCAGAAGtggatgaaaatgaaataaacagtGATGCTTCTAATGGCCTCGTCTCGGAAGCTGAAGTATATTTGTCAGGTAAAAATGGATCAGTACACACTGTTGTCACCAAGTCTAAGGGGAGCCACATAAAAGTCAAGTCAAGTGCTCAACTAAACATGCGAGGTGTTTATCTGCACGTTCTTGGTGATGCACTGGGATCTGTCATTGTTATCATTAGTGCCTTAATAATCAAGTTTGCTTCGGGCAAGTGGACAATTTATGTTGATCCTGCCATGAGCATCCTGTTGGTTTTTTTGATCTTGAAGACCTCCATCCCACTCATGCGAGAGTCATCACTGATCTTGCTTCAAACTGTTCCAACTCATATTAAAATCAAGGAGGTGCAAGATCGTTTGTTGGATCATGTGGAAGGAGTTCTCAGTGTTCATGAGTTCCATGTTTGGCAGTTGGctggaaataaaataattgCATCTGCCCACATCACTTGCCGATCTCCAGACGAATACATGGGCATTGCCAACAAGATCAAGAGATTCTTTCACAACGAGGGCATCCACTCCACTACTATTCAACCGGAGTTTGTTTGTGAGGACAAGAAAGAGGGTGAGTGTGTCCTTGCGTGTGGGCGGAATGACAACTGCGCTGCTCAAAAGTGCTGTCCTGGTGAAAATGAGAGTGAAGTGCGCAAACGTAATCCCGTTACCGATGATGAGGGTGTCATAGTTGACCAAGAATCTGTGGTGTAATTTACATTTAGtggaaaaaatttatttaaatggCCTTTGCCAAAAATTTTCCTTTGGAAAACCATAAGCATAAGCTTAATCTGTCCTTGACAAatcgttgattttttttttcccagtaAATTTTTTATTGGTTCTGAACCAAGAAAACACAGTCACTTACATGCTAAGGTACAGTCATCCTCATCTATCATCATGAAAAATTATTGTAATGTTAACCCTAGAGACCCTGTCAGTGACTGTGAGTGTGACCTGTTAGTGACCCTGTCAGTGATATCAAACCTCTCCTTAAAACATCACTCTCTAGTTAAACATACAGGAGCTTAACAACACTTTGGCAAAAGCTCATCACCCTTGCAAGTCCATCTCTCATATGAGGCCTGGGTCACAACGCTTAATCATGAAATTAAcgttaatttcaaaaatttgcgttaattttttcaaatgttaATTTCTGCTACCTAAATTTCCGTCATTTTGGCCTCAAATTATTGATACACTCCTGACAATCTTGACACTTAAGAAAGAAGAGTATTTTTTTAGGGTGTAGATCCACCAGTAACAGTGAAACTGTGACGAACCCTTGAAATGGCCAGATTTCTTCGCTTGACACCCTTCCTATGATTAGGGAAAGAACCACgaacaaagtttccatttcagattttaaaacatttaactTTGTTCCCATTGTCTCAACAAGTTTTGTGTCTTTATGAATAATTTTTGAACCTGGGGTAATGATAGTGGtaataatagaccttttcacggttttttaaaaacttttgacATGGGCAAGAGCGTCTTAATATTAGTAAAactgccaaatttgaaagtgaata

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002043 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01545 all species →	Cation_efflux	Cation efflux family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027469 all species →	Homologous_superfamily	Cation efflux transmembrane domain superfamily	Interproscan
IPR002524 all species →	Family	Cation efflux protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45820 all species →	FI23527P1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005385 all species →	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0006882 all species →	Biological Process	intracellular zinc ion homeostasis	Interproscan
GO:0010312 all species →	Biological Process	detoxification of zinc ion	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0071577 all species →	Biological Process	zinc ion transmembrane transport	Interproscan
GO:0006812 all species →	Biological Process	monoatomic cation transport	Interproscan
GO:0008324 all species →	Molecular Function	monoatomic cation transmembrane transporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14688	SLC30A1, ZNT1; solute carrier family 30 (zinc transporter), member 1	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.