Gene detail

Detailed information of XP_073229290.1 in Porites lutea

Genomic Location: chr13:17529436...17539763
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073373189.1

GAAGAGTCAAGGAGCGGTCGTACGGCGGCAGGTGAGAGGGAAGTGTTCGTACGAGAGATTGAACTTCTTTtcttgaaaatgaacaaaaaaccGAACATCGACATACTCAAGGAGCCGAAAGGATTCATAAAAGGAATCGAGCTTGTTATCACCATCTTTGCATTTGCAACAGTAGCAGGCGCTCTTGGTCATTTAGAGTTTTTGGTCAAGTGCAATAGTGACAATCCACCATCACGTCGAGTCAAAGCAGATTTCTCTTACCCATTTAACAGTATGCGTGTATATGCGTCAAGTAAGACGAATTGTATAAATGAGACAGGATTTGCCACCAAAGAAACATTGCCCCTCAGTTACAAATCTGAAGCAGAGTACTTTGTCTTCACTGGTGTGGTCTCCATGATCTTTGTGCTAGTTGCAGCAACTTATTATCTGTTTTTTGAAGACCGCGCCAAGGATGCAACCGCAACTGATATTGGTTTGCTTTCATTCCCAGTTGTgGATTTTGTTTTCACTATTGTACTTGTGATCTTCTGGTTCACCAGTTCTATTGCTTGGGCCTCTGGTTTGTCTGGCCTGAAAAAGGCTACCAGTGAAGAAGCTATTTTTAAAGCCTATAAGCCATGTCATGCCGATTATCCATATACTAGTGGTTGCAGCTCATTTGATGGTGCTAGGTATGGTGCTGCTACAGTTGCAGTGGTGTTTGGATTTCTCAACTTCTTTGTCTGGGCTGGAAATCTTTGGTTCTTGTTCAAAGAAACCCCGTGGCACAGCCCCAAGAGTTCTGGAGTAAGAGGAAGTGAAATTCCTCAGGAACCTCCACATCAGGATACTCCTCCAGCTAATTCAGTCTGAACAAATGGTCCAGCATTGTTTTGGATGGCCACGACAATAATTTACTGCTTTGATATGGAACACATGTAACTGTTAATTAATCTGGGGGTTCTGTATAAAATGTTAAGCGCAATACAGgcttttgtgaattttgtaccaataggccatttttgaGTTCTTCAAAACAGGGCTTCatacaaaacctttcttgtgaaaatgagttttatgtGCATGGGAATAAAAAATTATTCTCATTTCAATGGTTGTGCATTTACCAGTAGCCTTGCTTTGAGGCAGAGTCTTGGAGCAGCTCGGAAATGGCCTTTTTACTATTTGAGGGGCAGTGCTCATTGCAACTTGCAACTCAGCTGGTCCAAGAAAAATGCTGTTATCATGCATGTGAGAATTATCCAGTTAAAAGATGGTGAGTTGAGCCTTTCTTTTGAATATTTGAGCAATGATATTTTTCAGAGAAAAGCTCAACCCATCTAGTAATATTGCTCTTTCATTAAACATACGGTAAACCTTTCTAATattagcaaaaaaatatttgtcttCTCTACATACAGCCTATTTAATAATTTAGTcagtgaaaaaatttttttaccttacttCTCTATCTGTGACAGGCAAAGAgttttgtaaaagaaaaaacacgttTGTGATGTACGTAAGTTTCAATAGCGTGTAAAACATTACCTGTTTAACAATGCCTCCTAGACCTTAACCATTTGgtgataaatatttttttgtgtgttcttAGATTCCAAGTCAGTATATGGCAGTTCGAAACCCCACACTAGAATTAAAAGCTTTTCAGTATTATTGAATTGTTATactaagggacttgtcagaaattagcaggggggaggggggggtggtaatttgaaatttgggttcggaaatgaggtgacccatccctgcaatgggagtgaaatttgctgaccctccccttgagcttggcctaaaatatcatgaccctccccctcttgtataaatgataaaatctagttcttacaatacactagggtgagtcagtattatgaaaactcaaaatatatatgtctaatctgttctttgtaatgctatatacatacattttagatgacagcatttaGAGTCccactctgattctgacagctgatcacttgactctcctatttctcccaggttttttttttaccaaataaagaacttcctttttcctctgtgggtgaacctctacatgatcatgggcatatatttgcatgaccctccccctttcaacggcccatttttcatgacccttcccttttctgagtctcaaaaagttgcgaccctccctctgtttccaccccccctccccccctgctaatttctgacaagtccctaagaATGTTTGATTTTTGCTGCAGAATACTGCCTTGTAATTTTATTCCTCTTAAAATTATCAGCTGTAGTTTTTGAGGAAAGGTCGGGAGAATGAATCCTGATGCATCCATAGGGATTAACTCCAATAATTGGAGTTATAAACAAGCCCTAGGATTTCGCGGTAACGATAGTTTCTGGTACCGTGTCGTTACCGTGGTCTTAAAATAACGGAACCGAAAAATAGTTTCCCAGTGACATTTTCAGCCTTAGGGACCAATTTACAGAAAATCACTATTTTTCCACTCAGATTCTTAACTAGTAGTGCAATTCTTTAGATATGAATCGGCTTAAATACgaaagtaaaacattgtttaccATCCTTCAGTTTGCTGTTGTCTGCCAACTTGAATCGTTCCCAAGTGCACCGCACGTTACTGACTTATGGCTTCCAGtagcaagaaaaaaacatatgatcacaaaaaattgaaaacatttaGGAGGTGGGTTGCCATGAATTTTCACAGAGGGTCATGATCTCTGGCCACGGGACCGGAAAACTGTTTTCCATGCGAGTGAAATCCTAGAGCTTGTATAGAAATAACGTAATTGCAAAACACTGAAAAAGACTTAGCACCGTACAAAAAGTTTTGCTAACACGTTTCATTTGAAATGGCATACTTTTAGATTTCATCCAGAATTTCAGACGTTAGAGCTACATGTTTCGACGAGTTGTCGTAATATTTGTTTGCTCTGTCAGTGAGAGTTAAACTAGTGGGTTTCGcactggagaatttttttgcCAGTAGGCAAGGGGTCCCAGGGGAGAATTTGTAGATGTGTGTCTAATTCCTGGGGTCCCTCCAGAGTTTCTCCTTATATGGCAATTTAAAAATCTACAATAGAATTTAGCTTTACATTATAGTATAATCGAACTCTGTGCAGAGGACATTTGATTCTGAACTTAGGGGATTGTATTGACTTACATACTGTGATTATAGCTTTATGTTCAGTTTTCAGTTCTCCCTTATAATCGTTTATACCCATAGATCAGCATCTTTTTAGTATCACTGGTGTATTAGACCTAAAGGTAATGAGAATAAagaaaatgatcaccaaagataAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01284 all species →	MARVEL	Membrane-associating domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001285 all species →	Family	Synaptophysin/synaptoporin	Interproscan
IPR008253 all species →	Domain	Marvel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10306 all species →	SYNAPTOPHYSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008021 all species →	Cellular Component	synaptic vesicle	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073229290.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.