Gene detail

Detailed information of XP_073229943.1 in Porites lutea

Genomic Location: chr13:14103328...14132337
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140923768

ATGCTCAAACGTTGGCGTGATAAAAAGAAAGGAAATGACCAGCAGCCTGACAGCCCTACAAAGGAAGGCCCATCACAATCGGTGACTGAGACTTCGGGATTTATCTGTCCAGTGTGTATGATTTCCTTCAATTCTGCGGAGGATCTTCAAATCCACTTTGAAACAGCACATGTTGACAGTGAGCCAACACCATCAAGTGGGCATTTTATTTGCCCATTATGTATGAAAACCTTTAGCAGTCCTGAACAGCTGCAAACACATTTTGATCAGCTTCATGAAACTGAAAATGATTCTGCTGTGAAACCATCAGTTGCACCCTCAACACAGAGTTTACCACCTGAAACAACAAGAATTTGGAGTGAAAAACATGGCTCTTTTCTGTCTTTTGATGAAGAACTTCCAGCACCGAGGAAAGAATCTGAAGTGTCCCTCTTGTCAAGCCAGCTTAAAGAGCTGGAAGACAAAACACAGGAGATTATGTATCTTCAGCAGGAATTAAATGAGTTGAATGCTTCGTTAAAGGAAGAGAAATGGTACTCTACTGCTTTGAAGGAAGAAGTGGACAAGATCACCAAGGAAAAAGTTGAACTGGAGCAGAAATGCAGTGCTCTGGAAAAGGAAAAACAAAACCTGGAGACAGAATCAGACAAAAAAGTTATGGCAGAAAAAGAGAACAGCGTTAAATCTATGGCAGAGTTTGCCCAACTGAAAGTAGAACTGGCCAAGTCATTAGAAGCTCAAACTGGGAGTCAGAGTGAGCAGATGAATTTAGCTCAAAGAAATTCAGAACTGGCAACTGAAAATGCTGGCTTAAAGGCATCTTTAGAGGAAGAGCAAAGACAACAGAAACTTTTTAATGAAGAAATTAACAGGTTGAAGGAACAACTAGAGGACAAGTCCAGATTAACTGAAAACTTAGAAAAACAGTTGTCTCAAAGGCCCTCTGGTGATGAAATAATCACTTTACAGAATCAGCTTTCCACAGCACAGCAACAGGTGTCCTCACTTCGGCAAGAGAAGGAAGAAGAGCATAAAACTTGGCAAGAAAAGTTGAATGCAGCCTTAACAGAAGTCACTAGCTTCCAGATGAAAGTGAAGGAGCTTGAAGTGGAAAAGGCATCAAAAATTGAACAAGTACAGAGTCTGCAGACAGCAATAACAGCATCCACAGAAAGCAGAAAACAAGTGCACGAAGAAAGTCAAGAGAGACAGAAAAATCTAATCAACCTTCAGCATGATCTCAGTCAGGTCAATGTTGTATTGAAAGAAAAGGAGACATTCATTGATTATCTTCAAAAGCAACTTGATGAAACGAAAAGTAAACTGGACTCTGAGGTCTCATTGAAGGAAGATTCCAATCAACAAGTTCGAAACCTGCAAAATCAGTTACAAGAGGAACAGAGACAGACCCAAAATAGAGACTCAACAATAAAAGATCTTGAAACCAGCCTTCAGCAGAAAAAAGATGATATTACAAGATTTGAAGCTGAACGAACAGAACTTATTGCTAAGATTGAAGCTGGTGGTGGAACAGAGACTATTATTAATCAACTCAAACAAGAAAAGGAGAGCTATCAGAAAAGGTTACAAGAGGTGGAAGCTTCCCTTCATACTCAAACACAAGAACATTCCAGGAAAATCGAAGAGATGCACAAGGAGCAGAATAAGGTTGAGGAGGCATTAGCCATAGCAAAGGACACCTCTGGAAAACTGGAAAATTCTGTGCAGGATCTAACAACCATGTGCAGTAATTCATCCCAACAAATAGAGGAGTTGAGGAAAGAAATAAGAGAAAAAAGTGAAAGTCTAGTTGCCCTTGAAGCTGCAAAGGCTGCTGAAAAGTCAGTCTTAGATGAACAAGTCAGGTCTTCCCAAGAGACCTTGCAGGAGAAGCTAAAAGAGCTAAGTGCTCTTCAGCAACAAAATGTAAAGCTCAAAGATGATTACAGTGGGTTACGTGAACAGCACTCGGAACTTGAAGTTAAAGTGAAAACATCTGAGATGGAAATAGAAAGTCAAACAAAAAGATGTGCTCAGCTGGAAAGTGAAATTAAAGGAAAGGTTGAGGTTGTGACACTACTGCAACAAGAAAAATCCTCAGAGAAAACGTCACTTCAACAACAAATTGAAAATATTCAACAGTCCCTGAGTAAAAAGGATAGGGAACTGGTAGCTTTACAAGGGGAACTTCAAAAATACAAAGAAACATCAGCTGAGAAAATTAAATACCTGGAAACTGAGAAGGAACAATTATCTCTGAGTTTGACCTCTTCCAAGAATTTAGTGGAGGAAAAGGAGAAATCCATCACCATCTTGGAGTCAGATCACCAGGAAGCAAAAAAGGAAATTCTTTCATTAAAGGAACAAGTTGCTTCCATTTCAGAAACTGTAAAAGACAAAACTGATCAACTGGAAAAAAACACTAAACAACATTTTGAGGAAAAGGTCACATTGGAGACAAAATTATCTGAGTTAGACACGACCAACAGGAACCAGACATCAGAACTAATGTCGACTCTAAAGAATATTAAGGAAAAACTACATGAAAAAGAGGAATTGTGTGCAAAACAAGCTCAAGAACAACAACAGCTTCAACAGAAGATTCAGCAACTGGAACAAGGAAAAACTGACTTAGAGAAAGCTATGAAAGAACTTGGAGAGGCCCACCAAGAGCGAATAACTGTTTTAGAGACTGAATATAGCAATAAGGAAATGAAATTACAGGAACAGCTTGCTGAACAAGAAAAAATTGCAAGTGAGATGCAAACATCATTGGAGCAAAAAGATGATCGAATGACTGGAATGCAGAGAAGAATCGAAGTTTTAGAGGAAGAAGTAAAGAAGGAATGTGAGAGTTGTAAGAACTACGAAGCACAACTTTGTAAGATGCAAGTAGCATCTAAGGAGGAGCAAGAAAGGAGAAGTAAACTTGAGAAAGAACTAGAAGATGCTAGAAGTGATATTAAGGACCTTCAGGGCCAGGTGGCAGCAGGAGAGGAGGAACTGGGGCAAGTCAAAAGACAGGCAGAAGAAACTGAAGGCAATTTGAGGCAAACTGTTGAACAACTAATTGAAGCAAAGAATTCACTGGAGACGCAAATGTTGAATTTAAATAGTGATTTAAAAACTGCTAAGGAACAAGCAGAGAAAGTACAAGGAGAAAAGAATTCAGTCGAACAAGAGGTAGAAAATCAGAGAGAAGCTTTTAATGGTTTAAGGATCTCTCTGCAAACAAGGATAGAAGAATTAGAGAAAAATCTTGCCACTGAACAAGAAAGCAAAGAAAAGGTTCAACAGGAAGCTCAGGAGAAACAGCAGCTTCTAATCAAGCAAAAGCTGGAACTAGAAAACAAGCTACAAAACACTGAAAAAGATCTGAAAAAGGCCATAGAACAGCACGAGGAAACAAAAGAGGTTTCTAAGCGAGTTCAGTTGTTGCTTAAAGAGGAAACAGCAGCTGTTCAAATGAAACTGGCAAACGAAACCCAAGAACTAGAAGAGCTAAAGAAGGACAAGGAACAAACTGAAGCCAGGTTAAATATTCAGATTTCTTCATTAAATGAAAACCTTGCTGCGGCAAGAGCTGAGGCGCAGAAATATCAACAGGAAACGAAAGAGACTCAGGAGAAACTTGAACAAGCAGAGAAGCGAAATGATGATTTGAAAGGAGAAACTGCTGTTTTGGAAGCAACTGTTCAAAATAATTTAGACGAAAGGAGAAAACTTCTTGAAAGATGTGTAGCGGGAGACGAGGTCTTGGAGAAACAGAAAAAAGAAAACGCTGAACTAAAAAAAAAAGTAGAGAATGCACAGGCCGCTATGATGGAACTTACACAGGAAAACCAATCACTTCAGATCTTAAACAATCAAAAGAATGCTCGGAGATGGGAAAACGATGACGACGTTACAACTTGCAATGGATGCGAGAGGCAGTTCTCCATGACCATAAGAAAGCATCATTGTCGGAATTGCGGTTTGATTTACTGTTCTGACTGTACTGCGAAAAGTGCACCTCTTACTTCAAGCAAGAAACCAGTGCGAGTATGTGATAAGTGTTTTGCGGACGTCACATCAGGAACAGCCAAGTCATATTCTTTAGGTAACAAGCAAGGCTTTTAA

Transcript

rna-XM_073373842.1

TCCCGCCTTCCAACTTTTGATCAGCGGTGTGCCACGTAAATGGCAGCCATGTCACGATTTGTGGTTTTAATTtcttacattattttaaaaccctTCACAATAGTTTGTTTTGAATTTACCACTTAGTTaaaaagattcaagatgctCAAACGTTGGCGTgataaaaagaaaggaaatgacCAGCAGCCTGACAGCCCTACAAAGGAAGGCCCATCACAATCGGTGACTGAGACTTCGGGATTTATCTGTCCAGTGTGTATGATTTCCTTCAATTCTGCGGAGGATCTTCAAATCCACTTTGAAACAGCACATGTTGACAGTGAGCCAACACCATCAAGTGGGCATTTTATTTGCCCATTATGTATGAAAACCTTTAGCAGTCCTGAACAGCTGCAAACACATTTTGATCAGCTTCATGAAACTGAAAATGATTCTGCTGTGAAACCATCAGTTGCACCCTCAACACAGAGTTTACCACCTGAAACAACAAGAATTTGGAGTGAAAAACATGGCTCTTTTCTGTCTTTTGATGAAGAACTTCCAGCACCGAGGAAAGAATCTGAAGTGTCCCTCTTGTCAAGCCAGCTTAAAGAGCTGGAAGACAAAACACAGGAGATTATGTATCTTCAGCAGGAATTAAATGAGTTGAATGCTTCGTTAAAGgaAGAGAAATGGTACTCTACTGCTTTGAAGGAAGAAGTGGACAAGATCACCAAGGAAAAAGTTGAACTGGAGCAGAAATGCAGTGCTCTGGAAAAGGAAAAACAAAACCTGGAGACAGAATCAGACAAAAAAGTTATGGCAGAAAAAGAGAACAGCGTTAAATCTATGGCAGAGTTTGCCCAACTGAAAGTAGAACTGGCCAAGTCATTAGAAGCTCAAACTGGGAGTCAGAGTGAGCAGATGAATTTAGCTCAAAGAAATTCAGAACTGGCAACTGAAAATGCTGGCTTAAAGGCATCTTTAGAGGAAGAGCAAAGACAACAGAAACTTTTTAATGAAGAAATTAACAGGTTGAAGgaACAACTAGAGGACAAGTCCAGATTAACTGAAAACTTAGAAAAACAGTTGTCTCAAAGGCCCTCTGGTGATGAAATAATCACTTTACAGAATCAGCTTTCCACAGCACAGCAACAGGTGTCCTCACTTCGGCAAGAGAAGGAAGAAGAGCATAAAACTTGGCAAGAAAAGTTGAATGCAGCCTTAACAGAAGTCACTAGCTTCCAGATGAAAGTGAAGGAGCTTGAAGTGGAAAAGGCATCAAAAATTGAACAAGTACAGAGTCTGCAGACAGCAATAACAGCATCCACAGAAAGCAGAAAACAAGTGCACGAAGAAAGTCAAGAGAGACAGAAAAATCTAATCAACCTTCAGCATGATCTCAGTCAGgtcaatgttgtATTGAAAGAAAAGGAGACATTCATTGATTATCTTCAAAAGCAACTTGATGAAACGAAAAGTAAACTGGACTCTGAGGTCTCATTGAAGGAAGATTCCAATCAACAAGTTCGAAACCTGCAAAATCAGTTACAAGAGGAACAGAGACAGACCCAAAATAGAGACTCAACAATAAAAGATCTTGAAACCAGCCTTCAGCAGAAAAAAGATGATATTACAAGATTTGAAGCTGAACGAACAGAACTTATTGCTAAGATTGAAGCTGGTGGTGGAACAGAGACTATTATTAATCAACTCAAACAAGAAAAGGAGAGCTATCAGaaaaggttacaagaggtgGAAGCTTCCCTTCATACTCAAACACAAGAACATTCCAGGAAAATCGAAGAGATGCACAAGGAGCAGAATAAGGTTGAGGAGGCATTAGCCATAGCAAAGGACACCTCTGGAAAACTGGAAAATTCTGTGCAGGATCTAACAACCATGTGCAGTAATTCATCCCAACAAATAGAGGAGTTGAGGAAAGAAATAAGAGAAAAAagtGAAAGTCTAGTTGCCCTTGAAGCTGCAAAGGCTGCTGAAAAGTCAGTCTTAGATGAACAAGTCAGGTCTTCCCAAGAGACCTTGCAGGAGAAGCTAAAAGAGCTAAGTGCTCTTCAGCAACAAAATGTAAAGCTCAAAGATGATTACAGTGGGTTACGTGAACAGCACTCGGAACTTGAAGTTAAAGTGAAAACATCTGAGATGGAAATAGAAAGTCAAACAAAAAGATGTGCTCAGCTGGAAAGTGAAATTAAAGGAAAGgTTGAGGTTGTGACACTACTGCAACAAGAAAAATCCTCAGAGAAAACGTCACTTCaacaacaaattgaaaataTTCAACAGTCCCTGAGTAAAAAGGATAGGGAACTGGTAGCTTTACAAGGGGAACTTCAAAAATACAAAGAAACATCAGCTGAGAAAATTAAATACCTGGAAACTGAGAAGGAACAATTATCTCTGAGTTTGACCTCTTCCAAGAATTTAGTGGAGGAAAAGGAGAAATCCATCACCATCTTGGAGTCAGATCACCAGGaagcaaaaaaggaaattctttcaTTAAAGGAACAAGTTGCTTCCATTTCAGAAactgtAAAAGACAAAACTGATCAACTGGAAAAAAACACTAAACAACATTTTGAGGAAAAGGTCACATTGGAGACAAAATTATCTGAGTTAGACACGACCAACAGGAACCAGACATCAGAACTAATGTCGACTCTAAAGAATATTAAGGAAAAACTACATGAAAAAGAGGAATTGTGTGCAAAACAAGCTCAAGAACAACAACAGCTTCAACAGAagATTCAGCAACTGGAACAAGGAAAAACTGACTTAGAGAAAGCTATGAAAGAACTTGGAGAGGCCCACCAAGAGCGAATAACTGTTTTAGAGACTGAATATAGCAATAAGGAAATGAAATTACAGGAACAGcttgctgaacaagaaaaaattgCAAGTGAGATGCAAACATCATTGGAGCAAAAAGATGATCGAATGACTGGAATGCAGAGAAGAATCGAAGTTTTAGAGGAAGAAGTAAAGAAGGAATGTGAGAGTTGTAAGAACTACGAAGCACAACTTTGTAAGATGCAAGTAGCATCTAAGGAGGAGCAAGAAAGGAGAAGTAAACTTGAGAAAGAACTAGAAGATGCTAGAAGTGATATTAAGGACCTTCAGGGCCAGGTGGCAGCAGGAGAGGAGGAACTGGGGCAAGTCAAAAGACAGGCAGAAGAAACTGAAGGCAATTTGAGGCAAACTGTTGAACAACTAATTGAAGCAAAGAATTCACTGGAGACGCAAATGTTGAATTTAAATAGTGATTTAAAAACTGCTAAGGAACAAGCAGAGAAAGTACAAGGAGAAAAGAATTCAGTCGAACAAGAGGTAGAAAATCAGAGAGAAGCTTTTAATGGTTTAAGGATCTCTCTGCAAACAAGGATAGAAGAATTAGAGAAAAATCTTGCCACTgaacaagaaagcaaagaaaagGTTCAACAGGAAGCTCAGGAGAAACAGCAGCTTCTAATCAAGCAAAAGCTGGAACTAGAAAACAAGCTACAAAACACTGAAAAAGATCTGAAAAAGGCCATAGAACAGCACGAGGAAACAAAAGAGGTTTCTAAGCGAGTTCAGTTGTTGCTTAAAGAGGAAACAGCAGCTGTTCAAATGAAACTGGCAAACGAAACCCAAGAACTAGAAGAGCTAAAGAAGGACAAGGAACAAACTGAAGCCAGGTTAAATATTCAGATTTCTTCATTAAATGAAAACCTTGCTGCGGCAAGAGCTGAGGCGCAGAAATATCAACAGGAAACGAAAGAGACTCAGGAGAAACTTGAACAAGCAGAGAAGCGAAATGATgatttgaaaggagaaactgCTGTTTTGGAAGCAACTGTTCAAAATAATTTAGACGAAAGGAGAAAACTTCTTGAAAGATGTGTAGCGGGAGACGAGGTCTtggagaaacagaaaaaagaaaacgctgaactaaaaaaaaaagtagagaaTGCACAGGCCGCTATGATGGAACTTACACAGGAAAACCAATCACTTCAGATCTTAAACAATCAAAAGAATGCTCGGAGATGGGAAAACGATGACGACGTTACAACTTGCAATGGATGCGAGAGGCAGTTCTCCATGACCATAAGAAAGCATCATTGTCGGAATTGCGGTTTGATTTACTGTTCTGACTGTACTGCGAAAAGTGCACCTCTTACTTCAAGCAAGAAACCAGTGCGAGTATGTGATAAGTGTTTTGCGGACGTCACATCAGGAACAGCCAAGtCATATTCTTTAGGTAACAAGCAAGGCTTTTAACTGAAAGCACTGCACGTGAATATTCCTTGGTGTCTAAATTTGTCAATCTGTAGTTTCTCCTTTCGTTATCGACGCATTGCAGAACTGGAGGATGGTTAGATTTTACATGATCATCAAGCAAGAGATAATGTTTTGGAGAAGAACAAAATTGTACTTATTAGGATTTAATCTCAGCGTATAAAGTCATTCATCTTAATAGCTTCTCAATATGTGAGGTTTACTGTGACATTTAGCTTCGCGTTTTGTGGCGACACCGCAAACAATCACCGTTTAAAGTCAAACGTTAACATATAGCTGCTGCAGTTTAGAAATACACGTGGACAGCGCcctgcgttttttttttttctttttttttctccacgaAACAGGTTTGCATTCAGCCAAGCCAGGTTTCTCAGAATATGTTAAACTTCAAGTGGAAACTGACTTAATCAAAGAGTTTGCACATTAAGAAACAGCCCATAACAAAAAAGTTCATTTCTAACCGACTTTTAGCGCTTAAACGCTTCCGTAAATCACGTGACATCGGGAAAGCGCGATGCTAAAAGTCACTATAACAAGAAAGAGAATTTACTAAATTAGCACCATGTCTTAATATTAAAGGAACAAAAGTCTACACAAGTAAGGAATGTTACAACTTTTCGCAATCCAAAGgtatataatatttttaaagacatTAAGATATCAAATCTAGTTATATTTTCCTAAAATTGTTAAGGTTTGGACCAGAAAATTTATTCACTCTCGGAAATAAGCTGTGGCAGTGTATTTTAATATTGTTTATCATAACAGGTAAAGCTGgtaaatattgtaaatagtTAGGTGAAAATTATCTTTTAGTTAGCTGTATGTTTAtagttagtataggtaataggtaatagtatgatttgtagtgatatttgatataaataccacgagtgatttttcaaaattgttatacgtaatttcactcgcctaacggctcgtgaaatttgagacaattttgaaatatcacgagtggtatttatgccaaatatcacgtacaaatcatgctattatttgtttatactactacccacaaaaagtttgtaattttcatatgtaggtatttcaaattaagctgaaataccactgccctaagccaatcaaattgcagtaatttctcatgtagtagtataataagGCAAATACGTTAAATTAAACCCTTAATCTACGTTCACACGGCTGCAGCgaacgaattttcgaccggtgaaAAATTTCGACCGGACACTTCCTTCACACGGAACCGTTAAatatttttgcccttttctcACGGAACTTTGAATGGCTAGGTCTCTAAATTTTCGCACGGTTATTAAGGGAACACCTATACCCACGCATTGTCAACCAGTAGAAAATTATCTTGTCTTTTCTTACTCATGCAGCCATTATACCTTGTAGAGGTACCTTTATCTATTTTTCAGTGACTGGAAATGGCATTATTCGCCGTTTTCTTAGGTGTGCTCAAATTCTTATCAAATGTTCGTACTTTGACACTTTATTCCCAAAAgtcattattttgaaaatataagCTGTGAAGAATATAAGTGTGAACCAGACCTTTCTCTCTGAGCTCAAGGTTTCTCTGGATGTtattcactcttttttttttttgcgagtGAAATTATGCCTGAAAGACGTTTCTTCTTAGAAAATTCACTCAAGTAGGTAGTCTGTATAATCTTATTATATCTATGAAAGAGGAACGAGAGGGATCTCCATCAGTTAAGAcccaacttcatttttttgtgaaaaagttTACTTAAGTTGATTTACAAACATAGTAGTTCTAACTTGTATGAGGGGAAAATCCTATGGTATAATCACATAAAATGAAGCCACTTCAGTGAAACCTCCACATTctaactttgtttgttttggtttgtatttttaaaatgaaaaacgcaATTTTTGTTCCCGTATATGACTGGTACTTTAACAGTAAGGAAACCTTTTAAATGAAATGTCAGAATTTTAGATAAAAATTGACTCCTGCTGAAAATGCGTAAATATTTTCGATCCAATGTCaatattcaaataaaagatTATTAACAAACTAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23164 all species →	EARLY ENDOSOME ANTIGEN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005545 all species →	Molecular Function	1-phosphatidylinositol binding	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12478	EEA1; early endosome antigen 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.