Gene detail

Detailed information of XP_073230678.1 in Porites lutea

Genomic Location: chr14:18113097...18122204
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073374577.1

GCAATTATCATATTCCTGAATCTGACCTGTTGTGAGCTCTGCAACTTCCATAAATTAAAGTCGCAATTTGTTATGTTCGAAAGGAAAACCATGTTTGGCATTGCTGCTGTTGGACTATCCGCGGTTGCTGGTTACGGTCTTTACAAATATGTTCGTGCAAGGCAGAAGGCACAACAAATAAAAGATGCGATTGATGATATGATGAAAAGTATTGATAAACCAAGTGTTTACATCAGAGATTCAGTCAGAGTGAGAGATAAACTCAGGAAACTCTATGAAAGTGGACCAGAAAAACTGCAGGTCATCTCAGACTTTGACAAGACTCTCACAAAATTTGTTGTCAATGGGGAAAAGGGCTGTACTGCGTATGGAGTCATTGAGAGCTACAAGAATTTTCCAGAATCATACAGAGAGAAGgcAAAAGAGCTGAAAGAAAAGTATATGCCAATTGAATTTTCTGGagACATCTCATCTGCAGAAAAAGAACCTCTTATGATAGAATGGTGGACTAAAGGAAATGAACTCATTATTGAGCTGAAAATCAAGCAAGCGCAAATTCCTGAAATAGTAAAAGATGCGCACATCGCGTTGAGAGATGGTGTTGAGTGGTTATTTGTCAAGTTGCATGAGAAGCATGTACCCCTTCTCATTATATCTGGGGGTCTTGGAGACATTATCAAGGAGGTTATTGATCAACAGAGTACTATATATGACAATGTTACCATTGTGGCCAACTTCTTCAAATATGAGCAGGGAGTGATGGTTGGATTCAAGGACAAGCTTTTGTTTAGTAACAACAAAAGAGAGATGACAAAAGATTTGGAATTTTTCAACAGAAATAAGGACCGCACCAGTGTGATTGTGATGGGTGACCTGCCAGAGGATACCCATGTTTCATCAAGCCCTAAAAACCCTGAAGTTGTCCTCACCATTGGCTTTTTAAATGACAAGGTCAATGAGAATCTTTCCAACTACATGGATGCATTTGACATTGTCATTGTGGATGACCACAGCATTGAACTAGTTGATTTGCTACTGGTGCCAATTTTAAGGgcttaaaattataaaaatccTTGTGCACAGAAGGCAGTGAATCTCAGTAAGTCTTAGGTAGTTTTGGCAGTTTGCAGTCTAACTTGCTTGGAAGCAATGCATAATGACTCTTTCCATCAAGAAAGAAGGTAGACAGTTAACTAGAGATGGGAGGTACATTCACAGGATATTACTTCAAGAGAGTGAAAAAAGCTGGTTTGTATTTCTGCTAGGGAAAAGGCACAGTATTGTTGGTTTGGTTAGCACTATGCTGTTGTGTTAAGGTgtgggtatttttttttgtcgtcttttgattattttatttgagaAATATTGTTACCATGTGGCACAAAATTTTTGcaggttctaatttttgcgatttttccagcgatccgcaaaaataagttcccacATAAATtaattaccgcaaacattttccCACAACattttactccagagtaaatattctctaacttaaattcgctacacaaaaatacagtccTAAGAAGTTGTGTCTGTTCAATTCCAACTTGTCTCTTTTGtttggaaacaaaaataatgattaacATGAAGAGCAAAACTGTCACTGGTTTTACATAGGCTACGCACACCATGgtattgtttaaaaatatgtatttccATTGCAtgtactcaataaaaacaaaaatacatcaaaaatttGTCCAGGACTTCTGAAAATTGCAATAATTAATTTCCATTGAGGGAAACTAATCTGTCCTTATCGCAAACATTAGTTCCTGCGAAatacaaaaaatcgccaatttgcaaaaataaactcccacAAAAATATCACGCCACACGGTATTCCATTAATTTTAACACTTCCAAGAACACTATGAAACTACTTGGTGAGCATTAAGAATACTAACAtatgataatatttttcttAGACTTTTGTCATGAGAATCTTGGGAATACTGAAAAACAGATAGATACTTAAAGTTAGGGCATTGTTGTATTTAAATAATGTGGAATAAACAGAACTGATGGTGGGGTCATGAGGTTTTatagatattttctggaacaacAGAACATAGACGGTTGTATAGCTGTCATTAGTTTTTGACTTAAGTAGTGAATTTTGTATGAGCAAAAGTTCCGGTAGTAAtgtattttgtcacttttctgTATCAATATACAGTATTGTATTTTGACTATGGCAATTAAAGTGGCAAATTAAAGCTCACTTATTTATGGGTCTTTGGTGAATTtga

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003751 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05822 all species →	UMPH-1	Pyrimidine 5'-nucleotidase (UMPH-1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006434 all species →	Family	Pyrimidine 5'-nucleotidase, eukaryotic	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13045 all species →	5'-NUCLEOTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008253 all species →	Molecular Function	5'-nucleotidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24242	NT5C3; 7-methylguanosine nucleotidase	EC:3.1.3.91	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.