Gene detail

Detailed information of XP_073233128.1 in Porites lutea

Genomic Location: chr2:2461867...2493042
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140927387

ATGGACAGAAAGGATTCAGATGTTCATGATAATTTCTTTGCGAGCTTAAACCAACTGATTTTAAGCTTGGAACCGGCTATAAAGGAAGCTGGCTCTGTCGCAGCGGCCGAAGACATTTTGACACACCTGGAGGCAACTGATGAAAATTTTCACAGATATGACTTTGTGAGGCAGCTTAGAAGCCGTATTGACAATACACTTACACCGTTGATCGACAAGAAGTTAGAGCGACTTGATGGAAGGGAGGGGGACAGGAACAACACCCTTCCAGTGATAACTGAGGAGATTATAGCATCACCAGAGTTTATCAATCTCCAGCAGTCAATATTAGCAGATACAAAGGATGCTGTGAATGCACTGATCCAAACCTTTTCTCAGAATCCTCGCCTTCGTTTATCTGACTATGAGCTCACAGAAAACAGGGGCCGAATGGCACCTTTCAGGTTATCACTGGATTCAAGTGATGAAGATTCATCCATGTCATCTTCATTTGGACAGGTGCGGATTAATGCATTGAATACACTCTACCAGTTTCCGCTTTCTGATGAACTCACAAGTAAAAATTCAGAAGGAATAAGAAAAGGACTCTTGGCTGCACTGGCAGATGGAGATGAGCATCTTGCAGAAAAAAGCCTTAAATTCCATGCAAGAATGTTCATGGCATCCTCTGCTCATGTAACTAAAGAGATCTACACATGTCTAGCGGAACACCTCTGTTCCTACTTCACTGATGTTAGTTTTCACCGAGTTAATGTAGAGAATGGTCTAGATGTTTCTACTAGCAGCAATCAAAGACTGCTCAAAAGGTTTAGGTTACTGAATGAATTCCAACATGAAGTGGCCTCTTTTTGGATCAGATATCCAGAATGGTTTCTTGAGTCTGTCCTGGACAGTACATTTAATCTTTTCTCTTCAAGCTCTGTGGCTGGATTTGGTTCCTCAGACCTGCAGTACATGACACCACTGCATTTTCTAGCCCTCGTTGACCCAAAGGCAACCTGGTTTAAAAAGTGGATGCATGGTAATTACAGTAGGACAGTTGCAATCAAAGAACTGAAAAAGCATAGCTCTTTGTTAGTTGATGCTATCCGTCATTGTATTGACTTCTCCACAACATGTAAAACCCTTCAGTCCTTGGAACTGTTAGAGCTTGAAGAAGATCAAAGAGCCGATCTGCTTTCAGCTGTGGGCAATGATGGCTTGTTTTACACTTCCCAAGACTTGGAATATATTTATTTTGTTCATTCACTTTGCCTGCTTGGCAGAGTCCTTCTATACAGTGGTGGAAGAGACTTATTTCCAGTTGTGCTTCCAGACACTGAAGAAACCGTCACCATTTCTAGTTTACTGGTCGCATTGATTCGGATTATGTGCACAGCTTTGCCTAGATCTGGTACCAAACCTGTTTTAGATGCGGAATTCCACCCGGGGTATTTAGTTTGTGATGTGCTTAAAGAGATTGCTTCCTGCACAACCTCCTGTATAGAGTGCCTCTGTAAGGACGCCATCACAACCAGTCTTCTATCTCCAGTGCAGTCATGGCTTGATGGAGTAGAGAGCTGTGACAGTGCAGGAGCTGAGAATACCCTTTTGTTAGTAGCTGATGTTTTAGCCACCCTGGCTGTATCAGAGAATGGGCGGAAACAGCTGCTGTATGGAGAGACCCAGGATAGATGGCAAAGAAGCAGGTTTTCTTCTGCTCATACTATAGCTCAGTTTGCCAAAAAAGCATTATCCGACAGACTTCCGGGAGGAACTCCTTCAAAAGCAGTTATATCAGGTTTTGTGTTTGTTTGTCGACAACTGTACAACACTTGTGATGGACTCATGGTACTCAATCCGTATGAGCTACACCAGTTTGTAGCCAACGCCTGGATTAAGGTGTATGAATCAGCGTCTTCTGCTGATGAAGTATTGGCTCCCGACGAAACGTCACCAGAAGAACACGAAGAGCTGTTTGTTTGGGAAAGTTCGCTGATTGACAACTTGTTGAATTTTGCCGGCACTCCCAAAGGATTATTGCTTCTGCAACAGACGGGAAAGATGAATGAATGCGTAGCGTACATGAATGAGAGATACAACAAGAAATTACAAGTTAGCAAGTGTGAAAAGTTTGGTTACGGAGTAATGGTGACACAGATTGCTGCTACTGCTCCAGGAATGGTGGCACTGGAAAATAGAGGTTTTCTAAAGCGGTTGGTTAGTGACATTTGGACAGTATTTGAAGGTGGTCAGGACAGGAGACCCGCTCCTCCCAGAATTAAACACGTGGACAGCATCGATAGCAGAAGTTACAACAAGTCTCTGAACAATCTCTTGAGCGTATTGTCAGCATTCCCGGCGGTGTATGAAGTCCTGGGCGATGTTTACCGCCCTTCGACATCTGGTTCGGAAATGGAGGAGACCATTACAAGCAGGGAGGCATACTGTCCACCTGTCTGTATTATGGATTTTGTTGATCGCTTTATCATGATTGATTCGGAGGAAAAGATTCATTCTCTTTTTAACTTTGAACAGTCACATCACTTCGGGCTCAGAGTGTTAAACGTTCTCTGTTCCTGTCTGGATACGTTTCTTTTTCTGGAATGCCGCTATCGCTTTCAAGAGCTTCTCCTACAATCTCAACTGGACAACAGATTAGACAATGGCAAGGATTATATCATCGACATGTGCTCTGTAGAAAGAAACCAAATTCTTGTCAAAACCTATCTTGTTGGGGGTACATCAGAGAGAAACGTTCCTGGCAGGACTCTTACTGAGGATGTTGATAATCCTTATCCCTGGCCCCTGTTTTCCTCTTATCCTCCACCAAAGGATTATCTTCCAGTCGAGCAGATTCCCAAGATAACAGCATTTGAAGAAGGTGACTCTCTTTTGGAGTTCTTGGAGAGTTCTCAGCCAATGTCAGCTGACAGTTTGAAGTGGCTTCAAGACTGTCGGAAGACGTTTTGCGAGTCTCTAACATCAGGGAAAACTAAGCCACGAGGCAAAGTGTTGAAGTTGTTGCTCGAGAAGGTTTGCACAGCAATGACAAACATTCCAGAAGAGGCCATATTCCCTTTGATTGACTTTTCAGCAAGCGAAACCAGCCTGAAGAACATGGAGCTATCTGAAATAGAGAGCCTGGGCACTAAAGTAGCAGTGCGGTACGGTGTTCAACTAAAGCTTCTCCAGTCAACCACGGACGGAGTGGAAGACTTGACGTACTTACTGAAAAACTGCAAGTTTCTTCTTCAAGGTCAACAGCGGACTACGGACGCCACTTTACGCACGCTAAGTGGTGACTATGTCGGCCATGACTGGTTTGTTTCCACAGTTTTTCTCATGATGTACGGTGATCCTGATCTCTCATGGGAATTCCTTTTTAAATTCTCTAGTCTCGTCAGTTCTGGTTATCTCTGGGTCCGCAGGCTTCACGCTTCGGTGCATTTGCCGTTGTCTCTTACCGTCAGCGGTATCCCTCCACTCTATTCATGCTCGTGTCACAACGTGGAGTTAATACTAATGGCTGAGGTACCTCTGGTGTATTCTGCCTTTAGGATGTCTGGTTACACTCCATCACAGATCTGTCAGCACTGGTTACGTCAATGTTTCTGGAACTACCTTGATTGGGACGAGATCTGTTTGTACATTTGTACTTGTCTCACAATGGGCATTGATTATCAGGTGTACTTTTGTATTGCAGTTTTACGTCATTTACAACAAGACATTCTACGAAAAACGCAGCAACAGCAGCTTCTAATCTTCTTAAAGGAAAACCCAATCCCCAATTTCAAAGTTGCTGAACAATTGACATTCATGCAGGAATTGGAAGCTCGGTATCGTCCGTCAATTCTATCTGACTTGCAGAATATTACCAAACCCTAG

Transcript

rna-XM_073377027.1

GCGCCCTATCAACAAAGATGGCGGCATGGAAAACAAGGGAGCTTTTTTGGGTAATCGCTGGTGATTGAGCTTTAAACATGGACAGAAAGGATTCAGATGTTCATGATAATTTCTTTGCGAGCTTAAACCAACTGATTTTAAGCTTGGAACCGGCTATAAAGGAAGCTGGCTCTGTCGCAGCGGCCGAAGACATTTTGACACACCTGGAGGCAACTGATGAAAATTTTCACAGATATGACTTTGTGAGGCAGCTTAGAAGCCGTATTGACAATACACTTACACCGTTGATCGACAAGAAGTTAGAGCGACTTGATGGAAGGGAGGGGGACAGGAACAACACCCTTCCAGTGATAACTGAGGAGATTATAGCATCACCAGAGTTTATCAATCTCCAGCAGTCAATATTAGCAGATACAAAGGATGCTGTGAATGCACTGaTCCAAACCTTTTCTCAGAATCCTCGCCTTCGTTTATCTGACTATGAGCTCACAGAAAACAGGGGCCGAATGGCACCTTTCAGGTTATCACTGGATTCAAGTGATGAAGATTCATCCATGTCATCTTCATTTGGACAGGTGCGGATTAATGCATTGAATACACTCTACCAGTTTCCGCTTTCTGATGAACTCACAAGTAAAAATTCAGAAGGAATAAGAAAAGGACTCTTGGCTGCACTGGCAGATGGAGATGAGCATCTTGCAGAAAAAAGCCTTAAATTCCATGCAAGAATGTTCATGGCATCCTCTGCTCATGTAACTAAAGAGATCTACACATGTCTAGCGGAACACCTCTGTTCCTACTTCACTGATGTTAGTTTTCACCGAGTTAATGTAGAGAATGGTCTAGATGTTTCTACTAGCAGCAATCAAAGACTGCTCAAAAGGTTTAGGTTACTGAATGAATTCCAACATGAAGTGGCCTCTTTTTGGATCAGATATCCAGAATGGTTTCTTGAGTCTGTCCTGGACAGTACATTTAATCTTTTCTCTTCAAGCTCTGTGGCTGGATTTGGTTCCTCAGACCTGCAGTACATGACACCACTGCATTTTCTAGCCCTCGTTGACCCAAAGGCAACCTGGTTTAAAAAGTGGATGCATGGTAATTACAGTAGGACAGTTGCAATCAAAGAACTGAAAAAGCATAGCTCTTTGTTAGTTGATGCTATCCGTCATTGTATTGACTTCTCCACAACATGTAAAACCCTTCAGTCCTTGGAACTGTTAGAGCTTGAAGAAGATCAAAGAGCCGATCTGCTTTCAGCTGTGGGCAATGATGGCTTGTTTTACACTTCCCAAGACTTGgaatatatttattttgttcattcacTTTGCCTGCTTGGCAGAGTCCTTCTATACAGTGGTGGAAGAGACTTATTTCCAGTTGTGCTTCCAGACACTGAAGAAACCGTCACCATTTCTAGTTTACTGGTCGCATTGATTCGGATTATGTGCACAGCTTTGCCTAGATCTGGTACCAAACCTGTTTTAGATGCGGAATTCCACCCGGGGTATTTAGTTTGTGATGTGCTTAAAGAGATTGCTTCCTGCACAACCTCCTGTATAGAGTGCCTCTGTAAGGACGCCATCACAACCAGTCTTCTATCTCCAGTGCAGTCATGGCTTGATGGAGTAGAGAGCTGTGACAGTGCAGGAGCTGAGAATACCCTTTTGTTAGTAGCTGATGTTTTAGCCACCCTGGCTGTATCAGAGAATGGGCGGAAACAGCTGCTGTATGGAGAGACCCAGGATAGATGGCAAAGAAGCAGGTTTTCTTCTGCTCATACTATAGCTCAGTTTGCCAAAAAAGCATTATCCGACAGACTTCCGGGAGGAACTCCTTCAAAAGCAGTTATATCaggttttgtgtttgtttgtcgACAACTGTACAACACTTGTGATGGACTCATGGTACTCAATCCGTATGAGCTACACCAGTTTGTAGCCAACGCCTGGATTAAGGTGTATGAATCAGCGTCTTCTGCTGATGAAGTATTGGCTCCCGACGAAACGTCACCAGAAGAACACGAAGAGCTgTTTGTTTGGGAAAGTTCGCTGATTGACAACTTGTTGAATTTTGCCGGCACTCCCAAAGGATTATTGCTTCTGCAACAGACGGGAAAGATGAATGAATGCGTAGCGTACATGAATGAGAGATACAACAAGAAATTACAAGTTAGCAAGTGTGAAAAGTTTGGTTACGGAGTAATGGTGACACAGATTGCTGCTACTGCTCCAGGAATGGTGGCACTGGAAAATAGAGgttttctaaagcggTTGGTTAGTGACATTTGGACAGTATTTGAAGGTGGTCAGGACAGGAGACCCGCTCCTCCCAGAATTAAACACGTGGACAGCATCGATAGCAGAAGTTACAACAAGTCTCTGAACAATCTCTTGAGCGTATTGTCAGCATTCCCGGCGGTGTATGAAGTCCTGGGCGATGTTTACCGCCCTTCGACATCTGGTTCGGAAATGGAGGAGACCATTACAAGCAGGGAGGCATACTGTCCACCTGTCTGTATTATGGATTTTGTTGATCGCTTTATCATGATTGATTCGGAGGAAAAGATTCATTCTCTTTTTAACTTTGAACAGTCACATCACTTCGGGCTCAGAGTGTTAAACGTTCTCTGTTCCTGTCTGGATACGTTTCTTTTTCTGGAATGCCGCTATCGCTTTCAAGAGCTTCTCCTACAATCTCAACTGGACAACAGATTAGACAATGGCAAGGATTATATCATCGACATGTGCTCTGTAGAAAGAAACCAAATTCTTGTCAAAACCTATCTTGTTGGGGGTACATCAGAGAGAAACGTTCCTGGCAGGACTCTTACTGAGGATGTTGATAATCCTTATCCCTGGCCCCTGTTTTCCTCTTATCCTCCACCAAAGGATTATCTTCCAGTCGAGCAGATTCCCAAGATAACAGCATTTGAAGAAGGTGACTCTCTTTTGGAGTTCTTGGAGAGTTCTCAGCCAATGTCAGCTGACAGTTTGAAGTGGCTTCAAGACTGTCGGAAGACGTTTTGCGAGTCTCTAACATCAGGGAAAACTAAGCCACGAGGCAAAGTGTTGAAGTTGTTGCTCGAGAAGGTTTGCACAGCAATGACAAACATTCCAGAAGAGGCCATATTCCCTTTGATTGACTTTTCAGCAAGCGAAACCAGCCTGAAGAACATGGAGCTATCTGAAATAGAGAGCCTGGGCACTAAAGTAGCAGTGCGGTACGGTGTTCAACTAAAGCTTCTCCAGTCAACCACGGACGGAGTGGAAGACTTGACGTACTTACTGAAAAACTGCAAGTTTCTTCTTCAAGGTCAACAGCGGACTACGGACGCCACTTTACGCACGCTAAGTGGTGACTATGTCGGCCATGACTGGTTTGTTTCCACAGTTTTTCTCATGATGTACGGTGATCCTGATCTCTCATGGGAATTCCTTTTTAAATTCTCTAGTCTCGTCAGTTCTGGTTATCTCTGGGTCCGCAGGCTTCACGCTTCGGTGCATTTGCCGTTGTCTCTTACCGTCAGCGGTATCCCTCCACTCTATTCATGCTCGTGTCACAACGTGGAGTTAATACTAATGGCTGAGGTACCTCTGGTGtattctgcctttaggatgtcTGGTTACACTCCATCACAGATCTGTCAGCACTGGTTACGTCAATGTTTCTGGAACTACCTTGATTGGGACGAGATCTGTTTGTACATTTGTACTTGTCTCACAATGGGCATTGATTATCAGgtGTACTTTTGTATTGCAGTTTTACGTCATTTACAACAAGACATTCTACGAAAAACGCAGCAACAGCAGCTTCTAATCTTCTTAAAGGAAAACCCAATCCCCAATTTCAAAGTTGCTGAACAATTGACATTCATGCAGGAATTGGAAGCTCGGTATCGTCCGTCAATTCTATCTGACTTGCAGAATATTACCAAACCCTAGCAGTCATCTCATCCTCGCGGGAATCCGCGCAAGTTAAGAGTACGCGCATGACAAATAACCGAGGAGTGGTTACGAAGCGGGGAACAAAGCATGGATGGCGAAAGATGGTCAGTACGGTCCaaaactctttaaaatattCGACCCGCATAGAATCAACTAACACGTGCATTTCTCTCATCCTGGGGGAAATCTGTACCACTTTCCTCGGAGAACGTGCGCGAATTGAGCTTACCACAAGACGGAACGAGAACTCTCGTTCTCAAAGGAACATCACTCGCCCGAAACAAAATTTGAGCTCCATCTTGACGCCGCACGGCTGTCGCACCGGGTGTCCGTGCCGTGGCGTATGCACCGAGTATTCTCCAGTATTTGGGCGTATTGTTGCTGGAAATGGCAATCTTTGTGTGTGAGTAATCTTCTTAGAACATGGATGTCATCTCGCTCTTTCTCTCTCGAGCGATTTAagaacaacgaaaacaacatTTGTAGGACTGCAAAAACTGCCAAACAGACGGCGCGATGGTTTTCCTTGATTTCCCACACTTGCTCCTGAACTTCAATGAGCTTAATATTTATCGCCGTGATCTAGGCTAATTAGGTAATAAAAAGCATTGTATTGGTTGAGAATATTCTATGGCAATTATCAGTTATTAATTCAGTATTTATTCTTCATCTATCTATAACTTCATCTATGTGCTATTACCTGCCttcataaacaaaaaaaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14961 all species →	BROMI	Broad-minded protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039156 all species →	Family	PHAF1/Protein broad-minded	Interproscan
IPR032735 all species →	Family	Protein broad-minded	Interproscan
IPR035969 all species →	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13465 all species →	UPF0183 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0043001 all species →	Biological Process	Golgi to plasma membrane protein transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073233128.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.