Gene detail

Detailed information of XP_073233631.1 in Porites lutea

Genomic Location: chr2:15533082...15555125
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140927847

ATGGACAGCGTAAGGTATTTGTCTTATCATCAATGGAAAGAGACTAAAGGCGACACGAGCAAAGCTCAAACTTATCATCAGAAGCTTCTTACGAACGTGGGAACCCTCGAATCGAATGTGGGATTGATCGAGAAGCTCATAAAAGGTTACTTAGATGCCACAAAAGCTTTCTGTGGAGCAGGCTCCCAGTTAGCTGAGGCTTTCTCGACGGTTTTAAAGGAAACGCCGCTGTTAGAAATCTCGCAGCAGCTGAAGCAAGTTGTGGAAGAAATTGACCATGTCGCTCATAAGTCGAGTGTTCATATCACGAGTCAAATACTTGGGACCCTTTGCGATTTCACGGCAACGTTGCCAGAGCTCAGAAGAGCAATTGAAGCTCATAAAAGAAGTGTTCAAAACTACGAGTCGTGTCAGGAAAACCTCGACGTGTTAGAGAAAGATGATAGCTTAGTAAACAACGATGGGAAGAGACTCAAAACAAGCAGACAACGATTTCGAGCTGCCACAGAGGAGCTTACAACGGTAGAAGAACAGTTATACAGAAGCTTTTCTGAAGTTGAAGAAAATCGAGTCAAGATGCTGGGATCTTGCTTCCTGTCGCTATTGCAAGTTCAGGCACAGTTTTTGATGTCATCAGCCGACTTGACAACATCGCTTGGAGGCTTCCATGAGATTGGTGACTATCTGCGGGACAGAGAAGTTACCCTGGCTCTGAAGGATGCCACAGCTACTTGGATTTCCCTTGCTCAATCTAACCAAGCTTTGCGGCACGGTGAACTGTTGTCACGTGAACAAGTCCAGTTCCTAACACTGGGTGGTCAGGGAGATCTGGCCGATCCAGACAGAAAAGATTTGATACAAAAAGTCAATACTCTGCTTAAGAATTACAAAAAGGAGTTTGAACGAGCACCAACACCAGAAGCAGACATACCAGCAGGCTTCCACAAAAACCCCAGAGGAATAGAGCTGGCTCTAAAGGGATGCTGCAGTGAGCTTGAGGCCATAGCAGCTGGTGGTGTTACAGAAGCCTCCACTGTTCAAGAAATGGAACAACAGATTCTGAAGTTAATTCCTAAACTACAGTTAAAAATTGGTTATGTCATAACTGAAGTGTGTTCTTCTCCAAGTAAAGCAAACGACAATTTCAAGTCTAAAATGCACTGCATTAGAGACCTCGTTAGTTCAGTGGCCAAACAGAATGACATTCCACTTAACCGTGAGACCCTGGACATGTTTGTACTGATGGTGTTGTATGAAGCGTGTTCTCCAGTGTCCAGCTCTGCAGCAAAGGCTGCTGTGCAGCTTCTCTTTGGCAGAGCCCACCTGGTGACCGCAAAACCAAGTAGAGATAAAAACACTCGGCTGGCCCAAGTGTATGTTAAAGGAACATCTATTCATGTTGAAGTCTCCACTACATGGGTCATCACAGAAGATGCTTCTACTTTTTCCTGTCTTTCAAAAGATTTGGACTTCCCTTCTCCTCTGGGAACAGTTGATGCTTTGTACACATCCAAGTTTAGTTTGATGGATTATTTGGAGGACAAAGAAAGGCCTCTACCTGCCATTCATATCAAACAGCGCAACCGATCCAAGTCCCCGCCCCTGTTAACAAAACTTGACACTTCTCCATGCCACAAGCACAAAAGTTTTCGAAAGACCTTCACAAAAGCCACATCCAAGATATTCTCACGAAAGTCTGTGGCTGCTAAAGCAGCTAATAACTCGAATGCTGTAGCTGATCCAGCCAGTCAAAATGCTGTTTCTGGAACAGGAACAAGAAATGAATCATCAGGTAATCGCACATCTGTAGCCTCCAGCACCGATACAGGTGATGATCATGACACTGACATTGATGACCCTACGCCCCTTCCTCCACCACGCCCAAGGCGCTGGGCCAAAAAAGCAAAGGAACAGTCCATGGCACCAGATAACAATACCTCCAGCTCAAGTAAGGTGGTGGAAGAGCAGGCTAAAACTGATGACCCACCATCACCCAGTGACTGGTCTAGATCTGTGCCTCAGTTTCCTCTGCCAACTTTTAAACCAACCATGCAAATTTGTCAAAGTGAGCTGTCACTTGCTTCCCAAGAGGAACTCACAGAGGTCATTAACTTCCTTTCTGGTGCACCCATCAAGTTGCGGCTATTGAACGAAGATGATGTCAATCCCAGCATGGCAGAAAGTCACATGACTCCTATTGACAGTGGCCTTGGGAGTATTTATAGTATGGCTATGAGCAATGTCACACAACCTAGCAGTGCTCTGACGCAAGTATGTGACAAGGTTGACGACAGTGCTAAGGATAATCAAGAAGTGATGCCATCAACTAGCTCTTACGAAACCACAGAAAACCCTCCAGTTACTGTTAACACTGAAGGAGATTCTTCTAAAGAATTCAAACTGCCAAAAACCCACATGGTTACCATAGAGACACAGACTTCTCCAACAACTGAAGTGAGCCCCACTTTCTTTGTTAAACCTGCTGACACTGATGAGAAAGAGCAATGCACAGAGACACCAGCAGCATCTGCTGAGAAACAGGACAACCAACCCCTGCCAGAAGATAAAGTTAACGGAGGTGACGAAAGTAAAACCGATCGTGATAGTGATGAGAAAGACAAGGATGCTATTCTTCAAGAATCACCACCATCATCTTTGATACAAGTGAAGGATGGTGCAACTATTGGTAGTGACGTGATTCCCGAGAATGTACCAGAGAAAGAAACAGCAAAGTTAAGAGTTGATGATAAGCAGACCAACCCAAATAAAACAACCAGCCCTGTGCTTGTCACAGTCAGCTCAGAAGAAGGCACTGATGGCAAAATTTCCATTAGTGAAAGCCTTAGGAATGTGTGGGAGAAAACCAGCGTCCCTGTAGATGCTTCTGATCCTGGTAACAGCAATTCAGAAGGCTCGTCACTCCGCAAAAAAGACATTCATGGCTCCCAGGACACTCTTTACCACAGCTGTTGGTCCCTGTCGGATTTCCCTGGTAGCGACAAAAATGAAGAAGCCGATGAAGATGCTAAGAGTCTGAATGAAAGCTTACTACCAAGTAATTCAGGCCCAGGGCTTCTTGACCTTGGATTAAAGTGGCCAAGTTATGGTAGCAGTATCCATGGCAACCCTGTGTGGGCCAATTTTCCCAGTGGCCAAGGAGGCAATTGGAACCAGTCTCATGAGTCTCTCAACAAGGACGGATCAGGCAGGGGCAAGACTGTGTTCTCATTAGGACTGGGTATCACTGGACCTGATATGCTTGCTGCTGCTAGAGGAGGAAGCTGTGATGCAGTACACAGTGGACATTTTCCTTCCACGCCAACTGTTGGAAAACCTTGGAGTACTGAGGACCTTGCGCAAAAGATTCCTTGGTCAGCGCGAGACTCTTCTCCACCCCCACTGTGGGCCAAGACCACATCTTTAACAGAAGACACCTTGAGGCCATCTCATCACCGAGCCCCCCTCCCACCGCAACACTACAGTGATCCTTTTCTTCCGAGGGAGAACTGTTGGCCAGGCCATGGTAGGTCTGCAGCTCCCACAGGATACCCACACCCTGCTTATGCTCGGTACCAGTCCACCTTGCAACGTCAGCGCGCATTTGATAATATGCAGTATGGAATGCCTGGTGGTTTACAGAGAAACCGTGGTATGATAGGTGGGCAGTCAGCATTTCAACCGGTTCAAGCAGGTTTTCGCAAGCACGGTCAGCAAATCCTACCAGGTCATTTGCAAGTGCCTCCCCACTACACAACAGGACATGGATCTCATCACAACTCAAACCCGCGATTTTAA

Transcript

rna-XM_073377530.1

GTATGTTCAAATGAAATCAGATGTTTGCTTGAAGTTGTGAAACGAATGTTCAGAGTTCAGTGAAAGATCAGAGAAAGCGCGCCGCGTTTCCGCTTTCTTGAATGATCTCTTTCCTATGTTTTCATCTTCGGGGACAGCGGGTAATGTGAAATATGGACAGCGTAAGGTATTTGTCTTATCATCAATGGAAAGAGACTAAAGGCGACACGAGCAAAGCTCAAACTTATCATCAGAAGCTTCTTACGAACGTGGGAACCCTCGAATCGAATGTGGGATTGATCGAGAAGCTCATAAAAGGTTACTTAGATGCCACAAAAGCTTTCTGTGGAGCAGGCTCCCAGTTAGCTGAGGCTTTCTCGACGGTTTTAAAGGAAACGCCGCTGTTAGAAATCTCGCAGCAGCTGAAGCAAGTTGTGGAAGAAATTGACCATGTCGCTCATAAGTCGAGTGTTCATATCACGAGTCAAATACTTGGGACCCTTTGCGATTTCACGGCAACGTTGCCAGAGCTCAGAAGAGCAATTGAAGCTCATAAAAGAAGTGTTCAAAACTACGAGTCGTGTCAGGAAAACCTCGACGTGTTAGAGAAAGATGATAGCTTAGTAAACAACGATGGGAAGAGACTCAAAACAAGCAGACAACGATTTCGAGCTGCCACAGAGGAGCTTACAACGGTAGAAGAACAGTTATACAGAAGCTTTTCTGAAGTTGAAGAAAATCGAGTCAAGatgcTGGGATCTTGCTTCCTGTCGCTATTGCAAGTTCAGGCACAGTTTTTGATGTCATCAGCCGACTTGACAACATCGCTTGGAGGCTTCCATGAGATTGGTGACTATCTGCGGGACAGAGAAGTTACCCTGGCTCTGAAGGATGCCACAGCTACTTGGATTTCCCTTGCTCAATCTAACCAAGCTTTGCGGCACGGTGAACTGTTGTCACGTGAACAAGTCCAGTTCCTAACACTGGGTGGTCAGGGAGATCTGGCCGATCCAGACAGAAAAGATTTGATACAAAAAGTCAATACTCTGCTTAAGAATTACAAAAAGGAGTTTGAACGAGCACCAACACCAGAAGCAGACATACCAGCAGGCTTCCACAAAAACCCCAGAGGAATAGAGCTGGCTCTAAAGGGATGCTGCAGTGAGCTTGAGGCCATAGCAGCTGGTGGTGTTACAGAAGCCTCCACTGTTCAAGAAATGGAACAACAGATTCTGAAGTTAATTCCTAAACTACAGTTAAAAATTGGTTATGTCATAACTGAAGTGTGTTCTTCTCCAAGTAAAGCAAACGACAATTTCAAGTCTAAAATGCACTGCATTAGAGACCTCGTTAGTTCAGTGGCCAAACAGAATGACATTCCACTTAACCGTGAGACCCTGGACATGTTTGTACTGATGGTGTTGTATGAAGCGTGTTCTCCAGTGTCCAGCTCTGCAGCAAAGGCTGCTGTGCAGCTTCTCTTTGGCAGAGCCCACCTGGTGACCGCAAAACCAAGTAGAGATAAAAACACTCGGCTGGCCCAAGTGTATGTTAAAGGAACATCTATTCATGTTGAAGTCTCCACTACATGGGTCATCACAGAAGATGCTTCTACTTTTTCCTGTCTTTCAAAAGATTTGGACTTCCCTTCTCCTCTGGGAACAGTTGATGCTTTGTACACATCCAAGTTTAGTTTGATGGATTATTTGGAGGACAAAGAAAGGCCTCTACCTGCCATTCATATCAAACAGCGCAACCGATCCAAGTCCCCGCCCCTGTTAACAAAACTTGACACTTCTCCATGCCACAAGCACAAAAGTTTTCGAAAGACCTTCACAAAAGCCACATCCAAGATATTCTCACGAAAGTCTGTGGCTGCTAAAGCAGCTAATAACTCGAATGCTGTAGCTGATCCAGCCAGTCAAAATGCTGTTTCTGGAACAGGAACAAGAAATGAATCATCAGGTAATCGCACATCTGTAGCCTCCAGCACCGATACAGGTGATGATCATGACACTGACATTGATGACCCTACGCCCCTTCCTCCACCACGCCCAAGGCGCTGGGCCAAAAAAGCAAAGGAACAGTCCATGGCACCAGATAACAATACCTCCAGCTCAAGTAAGGTGGTGGAAGAGCAGGCTAAAACTGATGACCCACCATCACCCAGTGACTGGTCTAGATCTGTGCCTCAGTTTCCTCTGCCAACTTTTAAACCAACCATGCAAATTTGTCAAAGTGAGCTGTCACTTGCTTCCCAAGAGGAACTCACAGAGGTCATTAACTTCCTTTCTGGTGCACCCATCAAGTTGCGGCTATTGAACGAAGATGATGTCAATCCCAGCATGGCAGAAAGTCACATGACTCCTATTGACAGTGGCCTTGGGAGTATTTATAGTATGGCTATGAGCAATGTCACACAACCTAGCAGTGCTCTGACGCAAGTATGTGACAAGGTTGACGACAGTGCTAAGGATAATCAAGAAGTGATGCCATCAACTAGCTCTTACGAAACCACAGAAAACCCTCCAGTTACTGTTAACACTGAAGGAGATTCTTCTAAAGAATTCAAACTGCCAAAAACCCACATGGTTACCATAGAGACACAGACTTCTCCAACAACTGAAGTGAGCCCCACTTTCTTTGTTAAACCTGCTGACACTGATGAGAAAGAGCAATGCACAGAGACACCAGCAGCATCTGCTGAGAAACAGGACAACCAACCCCTGCCAGAAGATAAAGTTAACGGAGGTGACGAAAGTAAAACCGATCGTGATAGTGATGAGAAAGACAAGGATGCTATTCTTCAAGAATCACCACCATCATCTTTGATACAAGTGAAGGATGGTGCAACTATTGGTAGTGACGTGATTCCCGAGAATGTACCAGAGAAagaaacagcaaagttaagagTTGATGATAAGCAGACCAACCCAAATAAAACAACCAGCCCTGTGCTTGTCACAGTCAGCTCAGAAGAAGGCACTGATGGCAAAATTTCCATTAGTGAAAGCCTTAGGAATGTGTGGGAGAAAACCAGCGTCCCTGTAGATGCTTCTGATCCTGGTAACAGCAATTCAGAAGGCTCGTCACTCCGCAAAAAAGACATTCATGGCTCCCAGGACACTCTTTACCACAGCTGTTGGTCCCTGTCGGATTTCCCTGGTAGCGACAAAAATGAAGAAGCCGATGAAGATGCTAAGAGTCTGAATGAAAGCTTACTACCAAGTAATTCAGGCCCAGGGCTTCTTGACCTTGGATTAAAGTGGCCAAGTTATGGTAGcagtatccatggcaaccctgtgTGGGCCAATTTTCCCAGTGGCCAAGGAGGCAATTGGAACCAGTCTCATGAGTCTCTCAACAAGGACGGATCAGGCAGGGGCAAGACTGTGTTCTCATTAGGACTGGGTATCACTGGACCTGATATGCTTGCTGCTGCTAGAGGAGGAAGCTGTGATGCAGTACACAGTGGACATTTTCCTTCCACGCCAACTGTTGGAAAACCTTGGAGTACTGAGGACCTTGCGCAAAAGATTCCTTGGTCAGCGCGAGACTCTTCTCCACCCCCACTGTGGGCCAAGACCACATCTTTAACAGAAGACACCTTGAGGCCATCTCATCACCGAGCCCCCCTCCCACCGCAACACTACAGTGATCCTTTTCTTCCGAGGGAGAACTGTTGGCCAGGCCATGGTAGGTCTGCAGCTCCCACAGGATACCCACACCCTGCTTATGCTCGGTACCAGTCCACCTTGCAACGTCAGCGCGCATTTGATAATATGCAGTATGGAATGCCTGGTGGTTTACAGAGAAACCGTGGTATGATAGGTGGGCAGTCAGCATTTCAACCGGTTCAAGCAGGTTTTCGCAAGCACGGTCAGCAAATCCTACCAGGTCATTTGCAAGTGCCTCCCCACTACACAACAGGACATGGATCTCATCACAACTCAAACCCGCGATTTTAAGAATGGCAGGAAGTAAGGAGATGCTATGTACTCAAGGGGGTTGTAGGTTTTGTGTATAGCTTGATAGTTCATTTTTGTCGACAAACGAAAGCAATTAGAGACTTTAGTTCGAGAaagagtacgactacgagtacgagatttgacggaacattttttcgcgtattctcaaaatatagacaccccggaaagcttcattgtacttttgatTCACCAGATAGGTTAGGACTGTTATCTTTATGGAAGgaagttaagccctctcccgattgcaaaatgaTTTGATGACTTGTTTCCGCTaccacgacattctcgctaaaactcgtcgtAGAAtgcgacggctatcacgttttcccgccaaaatgaagCTTGTTcacacgcgcgagcactacttagtattgcgaaaatctcgttctcgtggtcgttctcgtcttagaatctaaatgTTTCTATCGATTTGACTACTTTCGTGGTACCAGTTGCCTCTTAGCTTGGAAAAGTTTCTGTGTGGGAAATAAGGCGATTGGTGTCTTGATGTTGTCAACTGGATCATTTTCCCCTTATTATGGAAATAGTGAGCTACAGTTGATTTAAATAAGATCCTACAGCCACAGAGTACAGGCAATGTCAACCTCCCAAGCAGACTTTGTTTTGGCTGATCACGCAATCCTACCCTTCGTGGAGAAGGAACGCGTCACGCAAATAGAAGTGCGTGACCAGCCAAGAGAATGtctgcattttttttaacaatttggCTTTGGTAGTAAGCTGAATTCTGTCTTTTGCACGTGCCGAAAATGGCCGGTTAGAATTAGAAAATAGAAATATTACAGTTTACTGTGAAATACTATAACATGACTGTAAGTATTCAAAATGTTGTCAACTGTTTGAAAAGAAGTTTACTGATCTCAGATTTATAATTGACTGCCAGTTGTTAACCGGAAGTTGAACGTTTTGAAAAATCTTAGTAATAGTTGAATCGTAGTCGAATGCTTCAATTTTAAGTAGTTTAGTCTGTGAGATTACCAAAGGACGTCATAAAGTTAACATAAAGTAAAATTCCGTTATTTTTGGAAAGCATAAGTCAAACGGATGACATACAGAGATAAACcgattttttgtcattttaatgtCTAAACATAAGTTACTTCATTGGCTTTTGTGTACGGCTTTTTAGAGTGCTTTTGTTTGTAGCAGTCTCATACTATGACCTTGAAGCAAGGGAGAGTGGAGAAGGTTAAAAAGCATATCAAACATATATTTTgccaaccttgtccccagggaaAGGCCCTGCGGACGAGCTTGACATGTTACAAAACTATAGTATTTTCTTAAGCATGATTAAGAAGGAAAGTAACGGTAATTTTGATgattttgcttgttttgggtAAGTACCGGCTTGAAACTATTGGTTGGAGAGAGACACAATTTTTTGACCATATAACAGCTACCTAACAAATTTAGATtgaaggagctgtgtcacaaaattcagtcaaattaggtaattacaaaatgcccgttaaattaagagaaacataaaaataaccacttaaaacattaaggaaggttaaaataacacaacagaaacaacagattcCACGGATGGTCAAAACTAAAGAAGATTGAATTGGATTGCAATTAGGGATTTTGAGAACTGTTGTTCAGCCTaccagtttttcaaagttgatctctgccgcttgcaacttcaaaaataatgctcgagagacatatttgtttgtcttggatcgctgattttgtcatttacaagtaatttctttgcttgctttaagttccatagcgattgagggcgagtaattggcaaagttaaacaaaatgaactggacacCGTGACACAGGCCCTTTAATGCCGCTCACAAAGTCAAATGTATTTCAAAGGAAAGCATGCAATGCGACAAGAGAGGGACGAGGGACTCCTCTCTGACCCTGACGTGTTCGGGTGTCTGCTGAAAAACATTTGCACCCTTAATTTCTTCctcaaaatcattttctttttaaaattatatcaAACACTCAAACAGTGTTTCATCATAACATCCATCACCTcgaattttgtcaaaaatgcTCCGCTGTGCGTTGTGTTTTATCTCTTTTCTCAGTGTTTGATACGTGATGGAACACTCTGTCTCGTGTTGTCATATTACACCAAACCCCAGACGTCCCAAAAGTGTTAAGCAGCAGCCAATTAGACATCGACTTATACTTGCCCGTGCATGACCCACGTCAGTAGATACAGGCATTGCCCCGAAAAGCGATATCTTGATTGGCTTGTGCCTAACCCACTGGGCATTAGAGAGGCACCTATTATTTGGCCTTTCTCTTGCTGGAGGTTCATCATTCAGTGTTTGGTAACTAGGCAACCTAATGCTTAGTGCCAATGAACCTGCGGAAGGTTTTTGCCGTTAAATGAGATTTTTATGTATAATTTACGACTTTGGTTGTAAGAAGCCGCTGCTTGTCAAAGCACAGGCCAACCAACTTTAATGTGAGAGTTGATCATTAATATGTGTGGTACCATATTGTGTAATCCTCAAATGGCCGTGaacataaaggatttgtatgggaattcagttTATAGATTCAAGAAGATGAAGGCTCGCGGGAATTTTCAATAAGAAACTCTTTACCTAGGCTAATCAAGGCGCAAAGCCattacctgaattcccatacaaatcctttttgACCTTTAGGTTTACGGCCATTTTGAGGATTGCACAATTTGATACCACGCGTATTaatggcttaaaaactctcGTAGTGAGCTTGGTCTGTCTGTGGTTAAGTTTTGCTTGGGGCGCAGGCGAACCAGGTAGAGTTGAGATTTAGCATTGAGGCTCCAtatttgctttttatttaatGATGTTATCAAAGAGAGACTTGCTGCGGCGTGTGTTGACATAGCGACTTTGCTTGTGTAGAGCGTAGCAAGCTTTTTACTTTACTTTGTAGCAGCTTTTTGAGTTTGAAGTTcgttattttttcattcttcaGGATTTCGTGGCTTTTATCTTCGTCAAAAGAGTCAtagtttatttaaaaacatgtgGTAACCTTACGGGATTAATAGACAATAAGAAAGGTTTTTTTATTTCGAGAATATGTATGTTACTAACTATATTGATGCCTGTAATTAGTAGATAAAATAGTAACCAGAAGAAAAGTCTTAATAATTTACTTGATTTTGACTGCTGTTAAAACTTACAAGCTGGCATTGTCGAGAAATAATCAAGTAAAATTAAATCTGCCATCATT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15923 all species →	DUF4745	Domain of unknown function (DUF4745)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043385 all species →	Family	Granule associated Rac and RHOG effector protein 1	Interproscan
IPR031813 all species →	Domain	Domain of unknown function DUF4745	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15703 all species →	RIKEN CDNA 4931406P16 GENE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016601 all species →	Biological Process	Rac protein signal transduction	Interproscan
GO:1905762 all species →	Molecular Function	CCR4-NOT complex binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26671	GARRE1; granule associated Rac and RHOG effector protein 1	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.