Gene detail

Detailed information of XP_073233792.1 in Porites lutea

Genomic Location: chr2:20097108...20110277
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140927980

ATGTCCGCCCCGGCTATTCTTGCCAAAGCGTTGTTTGACAATCTTGCTGATGCTCCTGATGAATTAAGCTTCAGAAAAGGAGATATTATCACTGTGCTTGAGCAAGATGTGGATGGTCTGATTGGCTGGTGGCTTTGCTCCTTGCATGGCAGGCAAGGTATTGCCCCAGGAAATCGCATGCAGCAGATTAAGAGAAGAGTAGATGAACACACCTCACCTGAACCAACAGTATCAAGTGAGGTTTTCACCTTTGAAGATATTGATTATGATGTTCCCAGGTCCCAGGAAGGACAAGATTATGCAGTACCAAGAGGTATTAGGAGTCCTGACTATGATGTCCCAAATGCTGATAGCCAAGAGAGCAATTTTGCTAATGGTACTTCACCAGCTTTTGACCTCAGTAGTAAGCAACATGAAACTGAAAATATTGTTGACAACTATACTGCTACTGCTGAAGTGTATGATGTACCTTCTGCATTTCTTGAAGATGATATCGAGGGAGATATTTATGACACTCCATCAAAGTCAGCTGATCAGGAACCACAAAATCCTACTGTTCTCCCTAAAGTATTCCCTAGTCCTTTTCAAGAAAATTGGAGGGGAGAAAATGACAAGAAACAACAATCAGTCATCTGTAATGAACCTGACCTGTACTCTGAAATCTATGATGTTCCTGTCATATCTGGTGATGGGGATAAAATTGATGGTATTGACAAAATAACAGAAGGAGTGAATGTGTCACTTGATGTTAATAAAAATCCTGCACGTTTGTCCGGTAATAGTAGTGATGGTAAACGTCAGTCATCTAGCAGCACAGATAGTGTAAAGTTGAGTTCAGAGGATGATGACTATGTCGACTATCAAGACATTTATGGAGATGGACGTGAGCAAGAGGTCAATGTGTACGATGTTCCAGTTCTGCCAATTTCACTTCAGGATGAGGGTCAAAGTTTCAATGGAGGTCCTACCCCAAAACGAACCCAAATAAGTATCTTACAGCGTATTAACATGTCTGCTGTCAAAGAATTAAAGTTGGATCCATCGGCAGCACTGCAGCGCCTTACAAAACTAGAACAAGCTGTAAATGTAACAGTTAGTAAGCTGTTAAGCTTTGTTACAACTTCTTGGAGGAATCCAAATATTCTGAAACCTCTCCTAGCTGACATCAGAGATATTGCAGGTAAAGCAAAAGTAGCCTTAAGATTATTGACGGAATTTGGCCTTAGTTCCCTTGTCAATGCAAGAAAACTTACAAGCCAAGAACTAAGTGGGAGACTTAGCAGAGCAATAGAGCCTTTACTAGAAACATATTACTCAGTAAAATTGGCTTTGCAAAGGCTTGATGGGCAAGACTGGAGGTTGCCTTTAGATAAAACTGACAACACTCATGATGATCTGGATCTGATCATGGTTCACATTCGGCCTGTTCCTGAGAATACACAAGCCTTGGCAGCAATCGTACGTTCTGCAGCCATGACACTGTATAATTTGCCAGCCAAGGGGAGCAGAGACAACCAAGCCACTAAGAAATCAGAGGTTTTGATTAACTCTGAGGAGTCCAAGACACACACACCAAAGAAAGAGAATATAAGTGGCCCTGAGAAGAGCAGTGAGAACTCAAATGAAGAGAAACAATTTACATTGATTAAATCTGTGGTAAAAGATGTCGTTGATACAAATTTCAAGCCCACATCAAATGGTGGGAAGTGGAGCCCCACAACTGTGCGCCGTGTTTGTGGAATGGACACACCTAAAAGGGATAGTGCTGGTTGGTCTGATGAAAATGTGGCACCAAACCTACCATTACGTTTGCAAACCAGTAAAGAAAAATTGAAAAGTTCCAGCTCTGAAGATGAAGTAAAATCTTCACCACCACCTCCTCCTGAAAGAAGGGATAGCAGTGAAAAGTGTCAACACCTGAGGCAAAAAAGTATAGAGAAGTTTCCTTTTGATACTACAGGAGGACCTCCCCCAAAGCCAAAATTAGATAGAAAAAACACAACAAGAAAAAGCTACAAAATTCCTTTGTTTACTGATCATAATCGGGATAATGAAAACATTTTACGCAGAGAGCATAATGAATCTGAGTCAGAGCCAACAGGAACTAGACGAAAGTGCAATTCTGATCCAACACAGTTACTTGAACAGAATAAGGAGGTTGCAGAAGGAAGAAGAATGACACTGTCTTCAGACAGAAACAAGGTTGTTTCTTTGATGAAACAGACAACAGTTCATGTTTCTGATTCTGATTTGCCGCAAAGCTTAAGACAATCAAAGAGTGCGCACTCATTTACATCACAATTTGGAGAAAAGGTCAATTCTGGATTTCCCAAGTTTGATGCACTACAGCATCGCCCTCTTTCAGACCTGATAAAAGGTGATGGTACCTCAAATGGAGTTATGGTGTCTTTGAATGATCGTGAACTTCTAGAGTTTTATAAATATGAGATTGATGCACAGCTTTTTGTGCTTAGTGAGGCTGTAAAAAGTTTTTTTGCCGTGGTGGAAAAAGCAGAAAGTCCAAAGGTGTTTGTTTCCAACAGCAAGTTTATTGTGTTGAGTGCCCATAAATTTGTGTACATTGGTGACACTCTTGGCAAGAGAATCAAGCATAGCGAGTTGAGAGGTCATGTGATGAGTGTTACTAACAAACTATCTAACTGTATCAAGATTTTAGTAAGTGCAACAAAGTCTGCGGCATTGCAGTATCCTGCATCAAATGCCATCAAAGAAATGAGTGATGCTGTTGTTGTGGTGAATGATGTTGCTGTTGAGCTGTACCAGATAGTAAAGAAAACTACAAAGGCCTAA

Transcript

rna-XM_073377691.1

CGGATTCACTTGACGTCCTCTTTCGAGTTCAGTGTTGGAATTTGACACAACAGTGGGACGTTGAAGATTTAGAATCTTCAGTTTACTTGGGGGCTGAATTACATTCCAGGAAAAAGACTATTCGGCAAATAATAAAGCTGCAGAGTAATTCTGTGTTTTACAGTCCGCCTGatattaaatgtttgttaataTCTGTCTTAGTGCACATGGCTTCATTGACTTCATTTTGCGAGATGCTGGAATGCAGTACAAGTAACAAGAGCTCAAGTATCTTTTGATTTGCGTGGTTTTCGACGAAATACTCAGGCATGTCCGCCCCGgcTATTCTTGCCAAAGCGTTGTTTGACAATCTTGCTGATGCTCCTGATGAATTAAGCTTCAGAAAAGGAGATATTATCACTGTGCTTGAGCAAGATGTGGATGGTCTGATTGGCTGGTGGCTTTGCTCCTTGCATGGCAGGCAAGGTATTGCCCCAGGAAATCGCATGCAGCAGATTAAGAGAAGAGTAGATGAACACACCTCACCTGAACCAACAGTATCAAGTGAGGTTTTCACCTTTGAAGATATTGATTATGATGTTCCCAGGTCCCAGGAAGGACAAGATTATGCAGTACCAAGAGGTATTAGGAGTCCTGACTATGATGTCCCAAATGCTGATAGCCAAGAGAGCAATTTTGCTAATGGTACTTCACCAGCTTTTGACCTCAGTAGTAAGCAACATGAAACTGAAAATATTGTTGACAACTATACTGCTACTGCTGAAGTGTATGATGTACCTTCTGCATTTCTTGAAGATGATATCGAGGGAGATATTTATGACACTCCATCAAAGTCAGCTGATCAGGAACCACAAAATCCTACTGTTCTCCCTAAAGTATTCCCTAGTCCTTTTCAAGAAAATTGGAGGGGAGAAAATGACAAGAAACAACAATCAGTCATCTGTAATGAACCTGACCTGTACTCTGAAATCTATGATGTTCCTGTCATATCTGGTGATGGGGATAAAATTGATGGTATTGACAAAATAACAGAAGGAGTGAATGTGTCACTTGATGTTAATAAAAATCCTGCACGTTTGTCCGGTAATAGTAGTGATGGTAAACGTCAGTCATCTAGCAGCACAGATAGTGTAAAGTTGAGTTCAGAGGATGATGACTATGTCGACTATCAAGACATTTATGGAGATGGACGTGAGCAAGAGGTCAATGTGTACGATGTTCCAGTTCTGccAATTTCACTTCAGGATGAGGGTCAAAGTTTCAATGGAGGTCCTACCCCAAAACGAACCCAAATAAGTATCTTACAGCGTATTAACATGTCTGCTGTCAAAGAATTAAAGTTGGATCCATCGGCAGCACTGCAGCGCCTTACAAAACTAGAACAAGCTGTAAATGTAACAGTTAGTAAGCTGTTAAGCTTTGTTACAACTTCTTGGAGGAATCCAAATATTCTGAAACCTCTCCTAGCTGACATCAGAGATATTGCAGGTAAAGCAAAAGTAGCCTTAAGATTATTGACGGAATTTGGCCTTAGTTCCCTTGTCAATGCAAGAAAACTTACAAGCCAAGAACTAAGTGGGAGACTTAGCAGAGCAATAGAGCCTTTACTAGAAACATATTACTCAGTAAAATTGGCTTTGCAAAGGCTTGATGGGCAAGACTGGAGGTTGCCTTTAGATAAAACTGACAACACTCATGATGATCTGGATCTGATCATGGTTCACATTCGGCCTGTTCCTGAGAATACACAAGCCTTGGCAGCAATCGTACGTTCTGCAGCCATGACACTGTATAATTTGCCAGCCAAGGGGAGCAGAGACAACCAAGCCACTAAGAAATCAGAGGTTTTGATTAACTCTGAGGAGTCCAAGACACACACACCAAAGAAAGAGAATATAAGTGGCCCTGAGAAGAGCAGTGAGAACTCAAATGAAGAGAAACAATTTACATTGATTAAATCTGTGGTAAAAGATGTCGTTGATACAAATTTCAAGCCCACATCAAATGGTGGGAAGTGGAGCCCCACAACTGTGCGCCGTGTTTGTGGAATGGACACACCTAAAAGGGATAGTGCTGGTTGGTCTGATGAAAATGTGGCACCAAACCTACCATTACGTTTGCAAACCagtaaagaaaaattgaaaagttCCAGCTCTGAAGATGAAGTAAAATCTTCACCACCACCTCCTCCTGAAAGAAGGGATAGCAGTGAAAAGTGTCAACACCTGAGGCAAAAAAGTATAGAGAAGTTTCCTTTTGATACTACAGGAGGACCTCCCCCAAAGCCAAAATTAGATAgaaaaaacacaacaagaaAAAGCTACAAAATTCCTTTGTTTACTGATCATAATCGGGATAATGAAAACATTTTACGCAGAGAGCATAATGAATCTGAGTCAGAGCCAACAGGAACTAGACGAAAGTGCAATTCTGATCCAACACAGTTACTTGAACAGAATAAGGAGGTTGCAGAAGGAAGAAGAATGACACTGTCTTCAGACAGAAACAAGGTTGTTTCTTTGATGAAACAGACAACAGTTCATGTTTCTGATTCTGATTTGCCGCAAAGCTTAAGACAATCAAAGAGTGCGCACTCATTTACATCACAATTTGGAGAAAAGGTCAATTCTGGATTTCCCAAGTTTGATGCACTACAGCATCGCCCTCTTTCAGACCTGATAAAAGGTGATGGTACCTCAAATGGAGTTATGGTGTCTTTGAATGATCGTGAACTTCTagagttttataaatatgagatTGATGCACAGCTTTTTGTGCTTAGTGAGGctgtaaaaagtttttttgccGTGGTGGAAAAAGCAGAAAGTCCAAAGGTGTTTGTTTCCAACAGCAAGTTTATTGTGTTGAGTGCCCATAAATTTGTGTACATTGGTGACACTCTTGGCAAGAGAATCAAGCATAGCGAGTTGAGAGGTCATGTGATGAGTGTTACTAACAAACTATCTAACTGTATCAAGATTTTAGTAAGTGCAACAAAGTCTGCGGCATTGCAGTATCCTGCATCAAATGCCATCAAAGAAATGAGTGATGCTGTTGTTGTGGTGAATGATGTTGCTGTTGAGCTGTACCAGATAGTAAAGAAAACTACAAAGGCCTAATAATATTATGATGTGATAGATCCCGAGGTCAGTATTACATCCCATCAGCCTAAACCCCTTGGTCTTCTTATAAAGTTTACACAACATAGTATTCTTTTTTGCTTCCACTCTACACTTAGTTGAAATTTCTAAGTCTCTTGAAAATTCTGCCCAgcaaatgttcatgaaagtttataagtttcttaaatttttaagggaaaaaaattcagaagAGGGTGAGGAGAAATCAAACTTGGAGTGTAGAGTCTCTGTTCCATCACCTATACCACGAGGCCACTGAGGATTTGCTGGCTAGTGATGGTTTGATTCAAACCTATATAGCCATAACCCTTACCCTAAATAGAAGCTAACACTATTTTCagggcttaaccctaatcaccaTAGTCAGTGCTTAATCCTAATCACTATTTCCAGTGCTTAACCCTTATCAGTGTTTCTTAACCCTGATTACTATAGTCAGTGCTGGAAACCAAAATGATAAGGAATACTATGCTGTGTAAACTTCATGAGATGTCTGAGGGGGTTAAGGCTGAGGGGATCTAATTCTAACCAGATCCAGAAGACAACAGTCATAGCAGTTGTTAACAAAATGGTAGCTTTTGCAGTCCAAGCTGTTATGCTTCACTCAGGTGAACAACTTTATGTGTTTAAACATCATTTTGTTCACAATTTAAAGGGAAGCAGTATGATCCCATTCATTAGTGATTTTACACATTAATTATTTCTAAAAAACAGATAGGCATTTTCAAGTCTGTGAATAATGCTGCCTCCCCTGAATGCTCTCTGCTGCTTGGGACATTTCACGTTATGTCCCTAGCAGCAAAAAGTGATGAGAGGTGGTTGCATGATTGCAGGCTAGTTATTAGGAATTGCCACATTTAGGAGTAAGTTGGGCAGACCAAAGAAGTAGAATAAATTAATCATAAATTAAGGAATAATATGACACATTTCAAATATTTATTGAAATGCTGTCTTGAATGTTCAGGCACAATATTATTAACACTTCTTCTCGTTACTAAACACTGTGAAAGCTAGACTGGTGTGTCTGGGCTAGGCCTAATGAAGAAGTTACATGCACACAGTAATGACtaatattttacaaaatcaaaCCTAATTGCTTAAAAGTACTGGGCCCAGTTTGAAAGCTGGTTAGTACTAAcacggggttaaattttaacctgttttttttctcttgttcaaAGCACTTTCTCAGgtaattttctctatttttttttttagagcgTTCATCACCAAATAATTATGGACAAAAAGAATTTAACTGAATTTgtgttttaagctttcatatctgaatttaaattttgcactaatcctgggttatcttaacctggTTTTGAACACTGGCCCTGGTGGTTATGGCTAGATATGTAAACACAGTAGTTAActtgaactctgaagggaaacgaaaaacagttggAGTTAGTGTAGGCCGCAAGCAGTCATCCGtctttcctcagagccacgcAAGTCGaatgaaaagttaaaattatgcaaattactgtcCACTTTGCTCGTGGCTTAGCCGCTCTCCCCTCGCACGTGCTCTCGTCTCTCCTGCTCACAGTCTAGAGTTAGTGGGAAATTTGAGTTATTGTGGTAAATtgcagtgaaattttgatcaaggaaaaggaaattaatattCAACTTATCAAGGTTCTACTGTATAACTGATTCAAAAAAAGGCTGTCAGTGCtgtagcctgcaaaaacagacATTTCTCCTACAGCTAATACAATCATGATTTATTCTGCAGGAACGTCTGCgtctcagtgacagaaatttcATATTGATGACTTAAAATCTGTCTTATCTGCTCTTAAGTGCTGATTGGACGTCAGagtagttatattgttttagcctttgtttacgaatgacagacataAGACAAAAGGCTGCAAAGGTTAAATATAAATGCAGGTATCtgtaacaaaacagtcaaaatttGTGGTATATATACTTTGCTAGAAGAAGTATTTAAGTTTAGCTGGAGTTTGTTCGCAAATGaccacaacactttaccaaaattgACAAGGAGAATTGTAAAATTGATCATATTTGCATTTGAAACGCCATGACTACTGATTTaatatgtaaacattgatttatttcatcagtatggaatttctgttgcctGGTCGCCGACATTCCTCCTCTTGAGATGTCCCAAGCGGTGAGGAGCGAGGATGAAATgactgttttcgcaggctatcagTGCTGAAGTGTAGGTTGGCATATCTTCAgtgatttgaaaataaaaattttgacacCCTCAATTCATAAGATGATTAGCATCAttcatgattttctttttctactgcATTGCAATGCTCAGTCAAGTATCATAACTGTTAACTGACTACCACCCATAATGCCTTTCAGCATTGTTGGGTATGCTTGTATGCTTTTCTTGCAACCTTTTTTGAATCATTTGTATTAATATGTGTATTAAAAGAACTGCAGTCAATTCAATAA

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08824 all species →	Serine_rich	Serine rich protein interaction domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF12026 all species →	CAS_C	Crk-Associated Substrate C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014928 all species →	Domain	Serine rich protein interaction domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR021901 all species →	Domain	CAS family, C-terminal	Interproscan
IPR037362 all species →	Family	CAS family	Interproscan
IPR038319 all species →	Homologous_superfamily	CAS, serine rich four helix bundle domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10654 all species →	CAS SCAFFOLDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0090527 all species →	Biological Process	obsolete actin filament reorganization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073233792.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.