Gene detail

Detailed information of XP_073234137.1 in Porites lutea

Genomic Location: chr2:30839219...30850363
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140928299

ATGGCGAAAAGAAATTGTTCGAGAACGAAAAATCTGGCTTCGAGCATCATCGGATCCCAAATCTCTGGGAGATGCCTCAGAACCAACATGCTTCCTGACGAGTTTGTCCAATCAGTCGATCGCCGTCTGGACTTCAAAGAAATACCATCGCTCCTCGCCAAACTAGAACGAAACAGCAGCCCGGAGAGATTCAACCTTACAAAGTGCTCGCGATATTTAAAGGATCTTTCAAGTTTATTCTCCAACAACGTGCATCTGTTATTCCCGGACAACGAGTTTCCACAAATTGCTAAGGAGAGGCTTCGACTCGGTCAAGTGATAAATTTATTCGGTGGAGTTGAGATCGTGTTACAAATTCTTTTTTATCCCACCACTTATGGTTTCAAGTGTTGCAAAATAAGACCAACAAGAATGCAGCAAGATCATTTGTGGACACTGTGTCTTGACTTCATTCACAGTCTTTGTCTTATGGTTGATGGAGTGGCTCTTAATTTGGCCAAGAGAAATGACTTAATAGGACATTTATTCACCCTTCTAGAGCAAAAAAAGACATTTAGTTTTGCTCTTGTGGTGTTGGAGGATCTCTTTAGCTCAAGGAAAGAACTCATTGATCTCGAAAAAATTGTAAATATGAGGAAATTGATGAGCATCCTTGATCAGCAGCAGCTAGCAAATCTCTGCCGAGTGTTGTCGTTTTCTCTCTCAGACTTAGAATCTGTTGAAGAAAGGAGCACTTTGCTTGCGCAAGATGAAGCTGACAAAAAGGGATTGTCGCAGAAGGAAGTAGCAGACAATAATCAAGCTACACTCATTGGTTTGAAAGAGTTTCTACCAAGAATTGTTAGACTGGCCTGTCAGCCACTTGAAAGAAGTTCTTCTCCTGGTAGTTTGCTTCTTGGACATGCCCAAGGTGGATTTCTTGATATGGTTGATTTCCACACCTTCTTACAAGATGTGCTCGAGACAGGAGGAATTGATATGGATCCTGAAGAGCGTGAAGCAGTGCCAATGTTGCAGTCAAGATTTAATCGCATACACGAGCTTATGCACAAAGTGGAGGTGTTTTATGTTCTCTGTTTGTTCTTGACGGGAAAGCACAAGGTTATGGTCCAGAAAAAGCTCTCAGACTTAAAGTTGATTCCTGGAATGTGCATTTTGTTTGACAAAATGTCATGGCTTAAAGATACTGAAAGATTCAGCCCAGACATGATGGACTTAGGAGAAATGGGTGATCACGAGTGCACGCCCCAAACTGCTTTGAAGATTCAGTTTCTACGTCTTGTTCACAGCTTCTGTGATCGGCATGAGAATAAACATCTTCTACTAACTCCCAAAGAAGTTGATGAACTTCAAGAGCTGTATGTTCAAAATGATCTTGAGCTACCTGAAAGTTTGCCCAACACTAACAGGAAGCTTTGTTGTACTGGAGAAAAGGGACTGCTGACAAAAATTTTGGAAACATTGATTGAATGCCCTGCGACTGCTCCTTTAAGGTTTTGGCTTTCAAGGGCTATTGAAGGATTTCTTCGAGGCCGAGCATCAGTTGGAGACCAGCTATTCCTGATCAAGAGAGGCCTGCTTGAGCATCTTGTTGACCACATCACAAGCGATGAACTTAAGCCAAAGGAGATTCTTCAAAGTAGTTTTGACTTGCTTGGTGAACTGATGAAGTTCAATCCATTTGCTTTCAAGAGATTTGACCAAGTCATTAGCGACAAACAGTTTGAGAAATTTGTGTCCATCCTGACATCGAATGTAGTGGATTCTAACATGTTGATTCGCTGTCTGGTGTTATCTCAGGAACACTTTATGTCTGACCGATTTTTCTCAGCTTTCACTGGAACTTGCAAGCTTGGCTCTCTAATTAACAACTGGGAACAGATGATTTTCTTGCTTTACAAACTGATCAACTCCATTACTGTTGGAACTCTTACTCAGGAAAATGTGAGCTGTCTGAACACCACTCTTGTTTTTCTGATGTTTGGTCACAGACATGGACGTCTCCCAGCTTATCTCACGGCTTTTGTCAGGGAAGAGAACATTCAGAATAATCCAGGCTTCATCTTGACAAATTTGAGACTTCTGTTAGAGTTCTGGAAGACTCATTATTTGAGAAGAGGAAAGGATTGCTCTGCTCTTGAACAGAGTTCCTGCATCAGCTTTGACAACTGGAAACAAGTTGTTGACATTCTTTTGTCGGATTCTACATCAAACACTTCAGTTCTTCATTATCTGCCATCATCTTGCACAAGAGACAATTAA

Transcript

rna-XM_073378036.1

GCAGTTATTCTTTTCACATGAAGCGCGTATGGATATATAAGAGGAAAATGGCTGCCGTAGATCTTTATCGAATTATTTCGAACTTCACAAACTTACGTTAGACCTTTGCCTCGAGATTCTGTAGTTTTGTCAGTTTGTAGCGCGATTATATTATCCGGTTAAATTGTCATGGCGAAAAGAAATTGTTCGAGAACGAAAAATCTGGCTTCGAGCATCATCGGATCCCAAATCTCTGGGAGATGCCTCAGAACCAACATGCTTCCTGACGAGTTTGTCCAATCAGTCGATCGCCGTCTGGACTTCAAAGAAATACCATCGCTCCTCGCCAAACTAGAACGAAACAGCAGCCCGGAGAGATTCAACCTTACAAAGTGCTCGCGATATTTAAAGGATCTTTCAAGTTTATTCTCCAACAACGTGCATCTGTTATTCCCGGACAACGAGTTTCCACAAATTGCTAAGGAGAGGCTTCGACTCGGTCAAGTGATAAATTTATTCGGTGGAGTTGAGatcgTGTTACAAATTCTTTTTTATCCCACCACTTATGGTTTCAAGTGTTGCAAAATAAGACCAACAAGAATGCAGCAAGATCATTTGTGGACACTGTGTCTTGACTTCATTCACAGTCTTTGTCTTATGGTTGATGGAGTGGCTCTTAATTTGGCCAAGAGAAATGACTTAATAGGACATTTATTCACCCTTCTAGAGCAAAAAAAGACATTTAGttttgCTCTTGTGGTGTTGGAGGATCTCTTTAGCTCAAGGAAAGAACTCATTGATCTCGAAAAAATTGTAAATATGAGGAAATTGATGAGCATCCTTGATCAGCAGCAGCTAGCAAATCTCTGCCGAGTGTTGTCGTTTTCTCTCTCAGACTTAGAATCTGTTGAAGAAAGGAGCACTTtgCTTGCGCAAGATGAAGCTGACAAAAAGGGATTGTCGCAGAAGGAAGTAGCAGACAATAATCAAGCTACACTCATTGGTTTGAAAGAGTTTCTACCAAGAATTGTTAGACTGGCCTGTCAGCCACTTGaaAGAAGTTCTTCTCCTGGTAGTTTGCTTCTTGGACATGCCCAAGGTGGATTTCTTGATATGGTTGATTTCCACACCTTCTTACAAGATGTGCTCGAGACAGGAGGAATTGATATGGatcCTGAAGAGCGTGAAGCAGTGCCAATGTTGCAGTCAAGATTTAATCGCATACACGAGCTTATGCACAAAGTGGAGGTGTTTTATGTTCTCTGTTTGTTCTTGACGGGAAAGCACAAGGTTATGGTCCAGAAAAAGCTCTCAGACTTAAAGTTGATTCCTGGAATGTGCATTTTGTTTGACAAAATGTCATGGCTTAAAGATACTGAAAGATTcagCCCAGACATGATGGACTTAGGAGAAATGGGTGATCACGAGTGCACGCCCCAAACTGCTTTGAAGATTCAGTTTCTACGTCTTGTTCACAGCTTCTGTGATCGGCATGAGAATAAACATCTTCTACTAACTCCCAAAGAAGTTGATGAACTTCAAGAGCTGTATGTTCAAAATGATCTTGAGCTACCTGAAAGTTTGCCCAACACTAACAGgaaGCTTTGTTGTACTGGAGAAAAGGGACTGCTGACAAAAATTTTGGAAACATTGATTGAATGCCCTGCGACTGCTCCTTTAAGGTTTTGGCTTTCAAGGGCTATTGAAGGATTTCTTCGAGGCCGAGCATCAGTTGGAGACCAGCTATTCCTGATCAAGAGAGGCCTGCTTGAGCATCTTGTTGACCACATCACAAGCGATGAACTTAAGCCAAAGGAGATTCTTCAAAGTAGTTTTGACTTGCTTGGTGAACTGATGAAGTTCAATCCATTTGCTTTCAAGAGATTTGACCAAGTCATTAGCGACAAACAGTTTGAGAAATTTGTGTCCATCCTGACATCGAATGTAGTGGATTCTAACATGTTGATTCGCTGTCTGGTGTTATCTCAGGAACACTTTATGTCTGACCGATTTTTCTCAGCTTTCACTGGAACTTGCAAGCTTGGCTCTCTAATTAACAACTGGGAACAGATGATTTTCTTGCTTTACAAACTGATCAACTCCATTACTGTTGGAACTCTTACTCAGGAAAATGTGAGCTGTCTGAACACCACTCTTGTTTTTCTGATGTTTGGTCACAGACATGGACGTCTCCCAGCTTATCTCACGGCTTTTGTCAGGGAAGAGAACATTCAGAATAATCCAGGCTTCATCTTGACAAATTTGAGACTTCTGTTAGAGTTCTGGAAGACTCATTATTTGAGAAGAGGAAAGGATTGCTCTGCTCTTGAACAGAGTTCCTGCATCAGCTTTGACAACTGGAAACAAGTTGTTGACATTCTTTTGTCGGATTCTACATCAAACACTTCAGTTCTTCATTATCTGCCATCATCTTGCACAAGAGACAATTAAACAGACAGCTGTCAATCAACAGACTAGATATCCAATATGCGGAGAAGTGTCAAGCTGGTCTTGATCAAATTCAATATATCAAGTGATTACTCAGTTTAACCAAACATGTAGAACACATGGTAACATATCTGAACAGTATTGGTCAATACGGACTACCGGGGTGCTTGCATTGTAAACACCTTGCAAAAACACATAAATTTATAAATCCTACTGATAAAATATTATACATTGTTCCAATAGTTAAGCATAATATAATACAACAGTTACAACCCTATATTAAATTATTGTGGGTATTAGGAAAAACAGGATATTCCTTTCAATAGTaattagaaagaaagaaaaaaaaagtttttaaagagaATTTAGTCTTCAATGTTTTATGAAAATTTCTCAGGGTGtttgtgaaaaaacaaaaaacggatTGAAGTCAGAAAACGGTTTAGTGTAcagtaataatatttttaaggTCTTTTCATCACGTGTagtgtgattttgtttttagggGCAGTTATGCAATTTACCAGCTCTGCTTTTAATGAATTTTAGGTCTAAGAATAAGCAAAATCATAAAGCTATTCATTCGGTGATTGTATAGTGTTATCAGcatttttttatatgttttcGTGTGCTAGGTATAAGTGTTAGGCATATTAGGGTATTGTgttgttccagaaaatatccatccCTCGCCCCCACCCCTGTGGTAATTCCAGTTTAGCTTCAGACtttcgtttaaaaaaattggtCTTTAAGACCCCCTCCCCTTTTGACCGTCCATGGGGTGGGTACAGATATTTTGTGGAACCACATTGTGACTTACGGTATCGATCATCTTGGTAGTCCACAAAACGTCCGTTCGTTTCGCTGTGTGGATGCTTACTCGCTATTAGTTGTTTCGCTACAACTTTAGGCCTGTATATTAGAGTGTTCGTGTAGAGAGGAATTGGAGCTAAAATCTTGATGTGTATGTTTAACTTCAAAATTATGTAGCGAAATGACTGTAGCGAAACGACTGGACCATCTGCAAAAGCGGCTACAAGTTAGGAGACAATTGATAAGTATTTATTGCCCATATAAACTGCAATGTATTATAGCGATAATCTTAGACttgtaaaatattaaattattttttaaaattattttttgtatggaCATGTATATTATGCACGCGCCATTTTAATAAATAGATAATTCATGACGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12463 all species →	DUF3689	Protein of unknown function (DUF3689)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022162 all species →	Family	Short transient receptor potential channel 4-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31743 all species →	TRANSIENT RECEPTOR POTENTIAL CHANNEL 4-ASSOCIATED PROTEIN TCPC4AP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0031464 all species →	Cellular Component	Cul4A-RING E3 ubiquitin ligase complex	Interproscan
GO:0019902 all species →	Molecular Function	phosphatase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11796	TRPC4AP; Trpc4-associated protein	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.