Gene detail

Detailed information of XP_073234663.1 in Porites lutea

Genomic Location: chr2:45276137...45289327
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073378562.1

CAGGCTTATAATCCAGCAGTCTCCATACTTTCAgttgttttcttccttcttttttggCGAGTTAAACGTTTTTGAACTTTGCCTTTTCAACATGGCAGACTCTCATCTTTCACAAGACGAAGTAGCAGAAATTCGAGAGTCGTTTAGTCAGTTTGACTTGGACAGCAATGGCCACATAACTTGCCAAGAGATTGGATCGGTTATGAAAGCTTTAGGAGAAGACATACCTGGCTATAAATTACGTGAAATTATAAAAGAGATCGACAAAAATGAGAACGGAACTGTTGAGTTCAATGAGTTCTTGGAGATTTataaacaaaacagcaaaaagtTCTCTGCAGGGTCAGAGTTTAAAAAGCTAATAAAGAAAAGGGACCAACTTGAGAGTTCAGGAGGGACTTCTGAAAGTTCGGCAGAAGGCACAAAGCATTCTTATTCTGAGGCAGAGAGAGTTGCTTTTGTTGACTGGATAAATACTGCACTCAAAGATGACAAGGAGGCACAGGCTTACCTACCCATTAACCCAGCAACGTCAGATGTGTTTGAAAAGATGAAGGATGGTATCATTTTATGTAAAATGATCAACTTGTCGGTACCTGACACTGTGGATGAACGTGCTATCAACAAACCTCAGTCGGGAAAGTCTCTGAGCATCTATAAGATCCACGAAAACATGACATTGGCCCTGAATTCTGCTCGCTCTATTGGTTGTAACATTGTTAATATTGGAGCAGAGGATCTTGAGAAGGGAAAGCCTCATCTGGTATTAGGTGTCCTTTGGCAGATCATTAGAATTGGCTTGTTTGCCAACATCACACTGACAAATGTACCTGGACTGGCCCGTCTCTTGAGGGAGGGAGAGACAATTAATGACCTCATGGCTCTTTCTCCTGAAGAAATTCTGCTGCGTTGGTTTAATTACCATTTGGAACAAGCCGGGCACCATCGCCGTGTGCATAATTTCAGTGATGACATTAAGgatTCTGAATGTTACTCCATTCTTCTTAGTCGTATTACTCCTGCTGAAATGTACGTGGATAACCATCCAATGCGCGAAAAAGATCTTAACAAGCGAGCAGAGAAAATGTTGCAGATGGCAGACAGGATCAACTGCAGAAAGTTTGTACGCCCTAAGGATGTAGTGTCTGGAAACTCCAAGCTGAACATGGCATTTGTAGCCAACTTGTTTAACAGCTACCCTGGCTTGCCTCCAATGGATGCTGAGGAAGTGGATCTTGAAGAGGCACGTGAAGAGACCAGAGAAGAAAAAACTTTCCGTAACTGGATGAACAGTATTGGTGTTAATCCCTATGTCAACCACCTTTACAGGGATCTGTGCAGTGGACTGGTTCTGCTACAGcttTATGATATTGTACAGCCAGGGGTTGTCAATTGGGATAAAGTTAACAGGCCTCCTTTTAAGCAAATGGGTGGAAAGATGAAGAAACTAGAGAACTGCAACTATGCAGTGGAGATAgggaaaaaagtgaaattttcattGGTTGGGATCGGAGGCCAGGATATCCATGACTGCAATGAAACCTTGACCCTAGCTGTTGTATGGCAGCAAATGAGGTCATACACACTTGCCCTGCTTTCGAAGCTAAACAAAGATGGAAAAACTATGGAGGACAAGGACATTGTGGATTGGGTTAACGAGAAGTTAAAGAGTGCGAACAAATCCAGCAGCATTGCTTCATTTAAGGATCCAGCTATTTCCAGCAGTCAGGCGGTGTTGGATCTGGTTGATGCTATCAAGCCTGGTATAGTGGACTATAGCTTGGTCACTCCTGGGGAAACTGATGAGgaaaaacaCGAAAACGCCAAGTACGCACTGAGTGTGGCTCGAAAGATTGGAGCTACAATCTACGCCCTGCCTGATGACTTGGTTGAAGTCAAACCGAAGATGGTGTTGACAGTGTTTGCCTGTCTGATGGCCACGGCGCTCGCACTGGAATAAGAAAAGAAGTAGTTAGGAATTAAGAAGAAAATGTTTAGTCCAACTTTTGAAAACGTATTTGAGATTTTGAAATATACTAAAATATTCGAGCgaatgaaaaagtaaaatacaGAGACCTACcgaacggcgacggcaacgtaACCgtaaaaaatagaaacaaacgATAGGTTTAGACGGCAGGAGAATAGATAGACTCGATCCTTTCCCCCCTAGGTTCCAATGTATCGTCACAACTTTAAAAGAACTGAACGAGTTgaaataatcatttttttatgttttcgttATCGTCAAGTCGTCGCGCTTTTGTAGCAGAAGTTCGTAATATAACGATTTGACTGCCTAttatttgtttgctttcttGCGGTGAAGAAGTTTACCAGAGGACGAACAACGTGAACCCAGTTAAGCAGCCCGGTTATGCTATTAAACTTTTCCCAACAAAAAAGTGCGTAATGGGTCAAATAAATCGAAGAACTTGGCGGTTTGATTCCGATATTTGTGCTGGGCTCTCAACTgagtaccaggatttgagtacgcgccatgattggcctgttaaaagagccattgttcgattggccaatcagCGCGGCGTTGAGTTTATTCGGAGTCCAGAACTAGGATCTCGGCGCTGTTTCCCAGACGTTAATATCCAGCATCAAGACAGGAAGAGATACAATCGAGCCGTAGTTTAGCTAGTCCCTACGCTCACCAGTGGAATGCGCGTGGCTGCCGGTAAACCCGGCGCGACATCCTTTGGCGCTTGTGACGCTGTAACTTTCCTGGACCTTAACTGTTTCCACGTTTTTCAGTTTGAATCTTTAATAcgtcaaaatatttaaatattaaGATCAGGAGATTTTTTGTCCTGAGAGTAACTGAAATCTTAAAATAAAGATTTGTTAAATGTGGTTGCACAGAGGGTTGCATACCCTCTCTCTATTGCAGCTATAAATTGACAAAATAACAGATTATACTAGGAATAAATATTAGGTACAACAAAGAAATGATCGGAAAAAATTCCGAGCCCCCAgcgggaatcgaacccacgaccttccAGATACCGATAGCACGCTCTAACCATTGAGTTATGGGCGACTCACATGGCGTACAGGTCGCGGGGTTTTAGATAGCCACAGGACTTCACATCTCGCGAGTGCGCTGGACTAAAGCAGAACAACACACTGACTTACTTGCATCACACAGGCACATTAAGAGAGTGTTATTTACACTTTGAAGCCAACCAACCTTCCAAGAGCGATGAAATTTTTTCCATGCGAACATTTCTTTATTGTACCTGACAAATTAGGCGATCACGGAATTAGAGAATAAAGCAGTATTCACTGCGGAATTGATGTCAGTAGTTTGAATTAACACAAATCAAAGTAGTAATGACTAAAATCCAAGAGGAATACTAACTAATAACCTCGTGTAAGAAAAGGGTGTGCTAAAATCGTTGTGATAAGTAATAAACATTTTTGTCAGTTACGTTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR039959 all species →	Family	Fimbrin/Plastin	Interproscan
IPR001589 all species →	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19961 all species →	FIMBRIN/PLASTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0032432 all species →	Cellular Component	actin filament bundle	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051017 all species →	Biological Process	actin filament bundle assembly	Interproscan
GO:0051639 all species →	Biological Process	actin filament network formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073234663.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.