Gene detail

Detailed information of XP_073235602.1 in Porites lutea

Genomic Location: chr3:44332005...44349947
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073379501.1

ttAATACATGCAGTCCGCTTTGCACACTTTTTACAGAAAAATCTTCAATGCATATTCACCCCATGGAATTTATTTGACATGTAAACATGGACCCTCAAGATCCTGAAAGAGTTATACTGCATATCATAGTAATCGGATTTCATCATAAGCGAGGTTCAGAGGTCGAGTTTTCATTTCCACCACTTGGAAATTCCCACAGCACCTTACTTCCTAGTGAATGGCAGTTTCTGCCATTTTTGGCTTTGCCGGATGGAGCCCACAACTGTGAACAAGACACATCCCTTTTTCATTTACCAAGTCGCAGCACTGCTATTCACGAACAATCCACTGTATTTGGGGTTTCCTGTTACAAACAGGTTGATAGCAAGGATTTGAAAGCTAAGAATGATGATGTAACAAGAAGTACTGTTCAGAAAAGTGTTTGCATCTTGTCTTGTTTGCCACTTTATGGATATTTAAGAGAAAAGCTTCAAGTTGCAACAAGAGTGTATTTTGATGAGAAGGACTTCTCAAGAACAGGAATTTTAGAGGAACTGTACAAAAATTTAAACATGTCTCTGTCACCAAGTCTAATGGAAGAGTCTTTGCTATTTGTTGgtCTCTCAGTGGTTGAGTTAGTTAGGAAATTCAGACATAGGGTTTTAATTCTATTTAAATTACTTCTATTAGAGAAAAAGGTTATATTTCATGGATTTCCTGTTGGCAGTCTATGTACTCAGCTTCTCTCACTAGTATCTCTATTTCCTAAAATGATTCAAAATGGCTTGGTGTATGCAACCCCAAAGGAAAGTGTGCTGGACAAGACAGAAAATGATATTTACCTTCCACTACATGTACAAGAATCCGAAGATTTTGCAGTGGACATTTTTGGATTCCCTTTAGCAATTTTTACAAAGaactcAATATTTCATCCATATTTATCTTTACAACAAATGGAACTATTGAAAAGCCCCCAAGTTCGCAGCTTTCTGGTTGGAGCATCAAATTATTTGTACAGAAGACAGAAGGGGTTATCAGAAGTTTTAGTTGATCTTGAGAGTGGCGCCGTCGAAATTAATGATCCAGAACTAAATGAACAGCTTTCGCTGTCCACGGCTGATCTGAGATTTGCAGATTACGTCATTCAACACGTCAATGATTACGTTGAAAAAGGCGAACAAGAAGCAGGATGGGATGGAAGCGATGAGTGGATACGAGCTCAATTTAAGATGTATCTCATGTCTTTGCTGTCCACCATACAACACACAGACGGCAAAGGGATGACAAACTACAATGAGCAGTTTGTGGATGCCTGGAAACAAACTACCAACTATCAAGTGTGGCGAGGGAAAGAGCATGCTGGAATCGACGATGTTCACGCAGGaCATCCATTTCAAGGCCAGTTAGGGTTGTCTGATTTAAAGATTCGGCTGGCCAGCGTTATGCAAGATGTGACCACGAACACAGAGAGAGGGCGCAGAATTGGTCAGGCTGTGGCAAGCACAGGGAAGGCAGTTGGTGGTGCCATTAACAGTGCACGCTCTTTGGTAACGTCATGGCTCTCAGAACTTACGCAATCAACTTCAGAACAAAACGCTCaggaggaaaataaaattgctACAGAGACTGAGGAGAAAACAGAAGAATAATTTCCCGATAATGAATTATTATGAACATATTGCTGTTGCTAGTATACCAAAAaaagtcttgtttttttttatcggtgaaaaaaaggccaaaatacGGTCAGTGCGTACTTGGCAGGACTGACTAAAAAGCAAAGGAAGGACGCTATAAATAGTCCATCCACATTAGACCACTTTCGCTTGTTTTGTTGGTTTTGCATTGCACTAGGAGGTCATGCGATGTCTTCAGGGAATTTGCCCTTTGTATTTTCATTAATTATTTCTACGTATGCGCGTGAATAAGACGAACTTTAAAGGAGTAACACTGTTCTTTCAGAGTAACATCGCTTAGCTTTTAACtggaaaataaacaaaccaTACGAAAGTGGCCTCTCCTGGGAGACCACCCT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09794 all species →	Avl9	Transport protein Avl9	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018307 all species →	Domain	AVL9/DENND6 domain	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan
IPR051731 all species →	Family	DENND11/AVL9 guanine nucleotide exchange factors	Interproscan
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31017 all species →	LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073235602.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.