Gene detail

Detailed information of XP_073236148.1 in Porites lutea

Genomic Location: chr3:8367795...8380866
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073380047.1

CAAAAATGAAGATAACGGAAGGAGTCACTCGCTGGTTGGGAAGAAATCGCGGAAAGAATATGACGACTTTCCAGAAGAACATCCTGTCTGACCCAACCAGTGACGGAAATGCGTCAGAGTTCAATCAGATAGCTCCTTCAACTCCACCAGAACCTCCTTCGTATCAGACATTTCCAGAATTCGACAGGAGGCCTATAAATGAGCTTGTCAATAGCGATTCACTCACCCAAAGGTGCCCAACTTGTGGAGGAACGGGGAAGCTCACCAAAGAGCAAGAACATGACCTAGTAGCATTAATTCCTGTGAGAGACAGAAGACTTAAGCCAAGAAGAACGGTCCTGTATCTCCtcttggcaatttttttctgcttgGCGATTGCCACAGTTGTCGGAGTCATCTTTTTCCCTAGAAATATTACAATTCATTTGGAAAGTGCAGCTCCGGTGAATGTTTCAATACCAAGATCAAACAGTTCAGATCCGTTTATCATTATAAATAGTACTATCTCTATTCACAATTCCAACTTTTTTGAGGCACATCTGGACCATTTTAACATTGAAGTTAATTGGGAAGACTATGTGGTGGCAAATCCTGATATCCCAGGAGGTGTTAGAGTTAAGCCACGTTCTACCCTCAATCATACATTTTATGTAACCACTACATACTCAAAGCAAGAGGCTGACAAAATTAGGAGGGTCTGTTGTGGTTGGTCATTTAATCTGGCCTTTTTGATAACGGTTTCCGCCAAGACTCACTCTCTGACAACATCATCTGAGGCATCAGATTACAGATTTAAATACATCAACTGCCAACTGCAAGGACTGGAGTGGTGGAAAACATGCTTTGATGATTATTGAAGCAAGGTTGGGGTCCTGCaacaaaactgtgaaataaATTATGGATTCCCGCAAATTATTATTTCACTGAACAGAAAATACTTGTTTTGATCGATGTATAATGGAAGTTTCAATGGCAAGATTTGTGAATAAAACCATTATTAGCTTCTTGCTCAATGGCTTTCATATGAATGTTCACACCTCAAGATTTAACACACGCAGCTAGAATTGTCCTTGGATGTGAAGTACAGTGATCCTGGAATTGACTTTCTCACTGAGAAGTGCTTCCCTGTTACATGTATTACCTACCAATGGTGTGAAAACTCTGCTAGTAAAGTTATTGCAGGTAAGAAGATTGCTAGGTTACAGGTATGGATTTAGGTTGCCTGTGTCACAGATAGAGTGAAAATTCTtgttaagtccatctgcaaaaGAGCGCCCAAGTCCTTGTACTGGGtcccccacctgtgtaccaggatttgggTAGACGCCATGATTGTCCTGTTTAAAAAGCCATTGCCGATTTGCCAATCAAGTTGAAGGAAAATTTGTTGTGCATTTGCAATTATTCGTTGAGTccatagagaggagaagtgtgacgtcacgtcaccatggtagcactatttctggatgataacaaaaccaacaacaacagcGATGGAAGGAGAACGCAAAAAATTAATAGGTTTTTATTGACAAAGCAACTCATTTGCATGCGCATCATGCTactttgttcatttctttgccatcgttGCACCCCtgcaacatgaaacttcctaatttcacatgcttgctttatggagtaggtgaacacaacacaacagtagtctttttctttttctaaacttaaataCGGTGCTTTCGGATTCAACCTGAGAAAATGTCGCCAACATTTGCCAAAttgaatgaaattgaataagattgatgaagtttgaagcagtgtgaattcactttttaagtgaccttttttggtttgttgtcatccaaaattttgctaccatgacaACATGACGTAATGACCTCTCCTCTCTATTGGGAAGCCAGAACAAGGGTATCGCAATGCTTGGCAGACTTTACGGGCTACGATTTGGGAGAATTGTTAGATTTGTGTTGCAAATAGTGACAATGTTTTAAAGTGGGATATCTGAGGGTAACAACTGCTTAGTAGAGGGTGCCTGTGGTACTGACATTGGACCCTTGATCTCGAGGAACATGTTGCATCCACTTTTATCTGTTAAAGGTCTGTTAGGTAGTAAATGTACTTTGAACAGGCAAAGAAATTTTGAGGCTTTTGAAGCAACAATGGTTGTATAATATCAGTGATCAGTCAGTGCAGTGAGTGGACAGTACAGAACACTGATAGAACACTGATTGCTGACAATGTTGGTATGAATGCAATAATTGCATTCATTCAGCTGTAGACAGTAAGAGGGAATTGTGTCATTTCaaggctgtcactaagggcTCGGAGCTGGGGGCCTGGAAACTGTTCAATTCCCCCACCTGccttgtgtttgtttttgtttctttttttggctttgCTTTCTTGGTTTATTTTATTGGTCTTGCTTCTtatttactgcgcttttcaaaaacactcaAACTCtaaaagttcaaaagccgcctttaCAATTGTTTttgctgctgtcaatcataattacgaatACAAGCAACAAACcctgaaacacagaaacacacaaaacagatcacaatccaccaatcacaaaccatgaaCTTTTGAACTTGTTGAAGTAGAcgtctgtttcctaagaggtccactaagatgattgacagctgTGAAAAATGCAAACGTCAGTTGggttttgaacttcagaattcctGTGTTTCTGAAAAGTGCAGTAATCAAGTACTGTCAAACCAGTTAATCAAGAAAATACCAAAACTATGGTTCGCAAGCATTTTTCACAATGATGAAACTTGAAATCGGTGCCtaaatatttgaaaattatttaaagGTTATATTTCTATATCCTGCGTGTTTTGAACTTGACAGAACACTGCTATTCAGTTTATTAAGCAATTCATTACAGTGCAACTGCTGTAACCAGGGCCACTTAGACATAGTCTACCAATCCGATCACGTAAAAAGCAAACATTCTGCAAATGTGTCCCAGAAaccaatatttattattttataatgtttTCATGTTTGAAACTTTAAATATAATGCTCGGGAGCATTATTTTGTGATTTAACAGCAATTTCTTTGCTAACACCCCTGCGTTATCCGATAACATGCAACTTCAAAACAGAAATTTAACCAAGGATTGCGTTGTTAACTGAgtgacctctcaggaaacatgGACTTTTTAAGGTCACATTGTTAGATTGTAATTGGTAGATTTTGTTctatgttgtttatttcatttcgTAGTGATTATGATTGACttcttggaatgtattgttattgtcATGCTATCGGCTTGGACAATTTTGTCTAGGTGACTCCTAGGTGGCCCtggttaaggtggctgaacactgttttggcagtttgttagtatatatgtcatttgccaaatcatggcaagagaaaggttgcggCTTgaaagctgaaacttggcaagtgaaaaatatatatactgaatatatttatttaatatttaaaatacggtaaaagtaaaaattttgccaaatatcacaaaattttaacgagtagattttgagaaatggTCCCCTGTGTACCATTGCCCTTTTcgctgccatgtttgtttgtcaaatttaaaacacgcgctaCCGCTGACTGCCCgaaaaactgtgttcagcctgACAACAATAAAAGAATAACTTTTTTCGTCTAACAAAGGATAAATGATATGGCTTAAActgcaaaatttctctttgagatGAGGCAATCAATCCCAAGAGCAAGAAAGGCCTGGTTTATGTAGGCGTTTTGAGGCATGTTTAAGTGaagtgttgtttttggttttttttatatatatatatatattgatgTGAAATGTCAAGCAATAGCAAAGCttttataaataatattaacTGTAGGAAAGAAATAATATAGTAATAATTCAATAATGATTATTGAAATTTAATTTGACTTagctaaaatttatattttggTACAAAGttggaaatttttgtttgactTTATCTTAATGTAAAGGTAATatcaaaatttcctgaaaatgTTCTTCTGTGAACTGATGGAATGAACTTTGTGTTTATCAGTCCCCTCTCTTTTATTTTGGAACCACTGCATTCAACTTAGAAGAGAAACTGGTGACGAGATTGGAGAAAAATCCCGAAAGTTTTTGACCTTGAATGTATTTGTGACATATTATCCATTTGTGATGTAAAACCGAAAGCCagtataataaaaagaatttctTTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07092 all species →	TMEM106	TM106 protein C-terminal domain	Domain	Interproscan
PF21002 all species →	TMEM106_N	Transmembrane protein 106 N-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048509 all species →	Domain	Transmembrane protein 106, C-terminal domain	Interproscan
IPR009790 all species →	Family	Transmembrane protein 106	Interproscan
IPR048511 all species →	Domain	Transmembrane protein 106, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28556 all species →	TRANSMEMBRANE PROTEIN 106B	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_073236148.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073236148.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.