Gene detail

Detailed information of XP_073236372.1 in Porites lutea

Genomic Location: chr3:12982047...12986866
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140930543

ATGGATGACAAACATCGAGAAATCTTGCGACGAAACTGGTCCACACTCAGAAGGGATCTGGAGCCAGTGAAGTTGTTACCTCAGTTGGTGAACGTCTTAGACGTCACAGATGAGCAAGAAATTAAAGTGAGAGCTACTCGAGAAGATGCGAGTGATAAGCTGTTAGAAATTCTACCCAGGAGAGGGCCAAAGGCGTTTGAAGACTTTGTTAAAGCATTGCAGGAAGTCCAGCCACATTTAGCCTCTCCGTTAGTACAGCAATCAGAAATGGAGGAGATCAAGACAGAATTGAACCGCGCAAGAACACGTAGCGCGAGGTTGAGGGAAGAAGTTAAAATAACGAGGGCAGAATTAGAAAAAGAACGACAAAATCACAAGAAAACTCTAAAGGAATGCGAGGAACTAAAAAGTATGAATAAAATGTTAATGACAAAAGGAGAAGACGATAAGAAACTCATGGAAAGCAGACTTCAACAACTGAAGACAACAATTGAAGAACTGGAAAAACAGGTATTGGCTGAAAGAAGTGAAAAAGAAGTTTATATCGAGGAGACGGAGAACTTACGGGGTTTGTGTGACCAGCTAGACGAAGCAAGGTCACGAACGGAGAAAGAGTTCTGCAAACTCAAGGAAACACTGGATGAGAAAACAAAAGAAAACAAAGAGATGGTCCGAAAGTTGTCAGACTACAACAACAATATTTTAAACGAAACATTTCTTCACGATGACCTTCACTCAATTTCTCGCCAACGAGAAATTGTCCTTTCTGATCAATCTCCAATGAGGGTCCTCACTCCCCTTTGTCTTACTGAGAATGCAGTCTTGGAAAAGAACAGTAAATTTTTGGAAAATGGCGCAGACCTAGCGGTTGAGCTAGAAGAGACAAGAAAGGATCTGGCTAGAGTGGTGAAAGAGCACGAAGGAACAAAACGAAGATGCGAGAAATTAGAGAAACAACTCGAGGAAACTCTTGCTTGTATGGAAACACATCGAACAGCGAGCGTCCATGACAGGGCCACTTCTCCTGGAGAGATAGTGCAATTTGAATTTGAAGGTTGTTGTTATTTCTTTGCAAATGGGCTGAACTGCTCGCGTTGTGACGAACGTAAGGAAGAATGTAACTTGCTGCGAACTGAAAAAGACCTAATCAAAGCAAAAAAAGAGAAGTTGGAGGAGGAAAATAAGCAAATAAACAGCCGCATCAAAATATTGGGGGACGAACATATGCGAGAAAGGCAAACATTTCAAAAGGAACTGCAAAGCATGAAGGAAGAACATGAAACTTTATCACGAAACTTTGAGAAAGAACTGCAAAAAATGCTTTGTGGAGTAAAAGAACAGCAGTTACAGGAAATGAAAAATCTACAAGTGCAGAACGAAGAACTAAAAGAACAGATAAATAAACACAAATCTGAAGTTCATAAAATAAAGACGGGACTGAGTAGGGAAAAATCACAAGTCGAGAAACACCAAGAAGAGTTCCTTAAAGTAAAGAAAAATTTGTCTCGTGAAAAGAAGAAGGTAAAAGAAGTGAAAGAAGAACTGTTGGTTGAAAACAAGGCAAAAAAAGACGCGTTAAAGGAAGTGGAAAAATTGATGAGGGAACTAAGCAATCAGGAAGCGGACAAACGTGAAGATATTACGCGACTCCGCGAGGCCGCAAACGTGGAACGCGCCAAGTGCGACACTTTAAAAGAAGAAATTCAAAGGTTGCGGAGCATGCCAGGCCGCGTTTTAAACTACAGAAAAGATTTCGACAGACATGGTGTTCTCTATGCCCTAGGAACAAACTTTGGTACAACTCCATGGGTGAGCCCCGGTGGTACCAGCGCCTCTCCTACAAGAATAATCGCCACGCGCTCCTCTAATCATGATGAGCACAGTGACGCAATTGATCTGCTTGAAAATCGCAGAGGAAGCTTAAGTGGAACAAAGGACGAAGACAAATCATGGTGGTGTGTAGACTTAAAGGAAAAATACGCTTTATATCTCACCCACTACTCCCTGCGACATGGGAGAGACAATGGAATGTCAATCATTCGTAATTGGCGCTTAGAAGGGTCGCTTGATGAACGTATTTGGAAGACACTAAAAAAGCATGACAATGATCGCGGGCTCAAGGATCCTTTCCCTTACTACACAGCCACATGGCCAGTCGACGGAGAACTGGGGGCCTTTTGGTATTTTAGGATTTTCCAGACGGGCAAGAATTCCTCAGGGAGATTTAGTATTTTTCTTTCCGGTATTGAATTGTATGGAATACTCATAGACGTAGGCGGTTAA

Transcript

rna-XM_073380271.1

AAATCTGGTACTAAAGGACAACTGGGGGCACCATGGATGACAAACATCGAGAAATCTTGCGACGAAACTGGTCCACACTCAGAAGGGATCTGGAGCCAGTGAAGTTGTTACCTCAGTTGGTGAACGTCTTAGACGTCACAGATGAGCAAGAAATTAAAGTGAGAGCTACTCGAGAAGATGCGAGTGATAAGCTGTTAGAAATTCTACCCAGGAGAGGGCCAAAGGCGTTTGAAGACTTTGTTAAAGCATTGCAGGAAGTCCAGCCACATTTAGCCTCTCCGTTAGTACAGCAATCagAAATGGAGGAGATCAAGACAGAATTGAACCGCGCAAGAACACGTAGCGCGAGGTTGAGGGAAGAAGTTAAAATAACGAGGGCAGAATTAGAAAAAGAACGACAAAATCACAAGAAAACTCTAAAGGAATGCGAGGAACTAAAAAGTATGAATAAAATGTTAATGACAAAAGGAGAAGACGATAAGAAACTCATGGAAAGCAGACTTCAACAACTGAAGACAACAATTGAAGAACTGGAAAAACAGGTATTGGCTGAAAGAAGTGAAAAAGAAGTTTATATCGAGGAGACGGAGAACTTACGGGGTTTGTGTGACCAGCTAGACGAAGCAAGGTCACGAACGGAGAAAGAGTTCTGCAAACTCAAGGAAACACTGgatgagaaaacaaaagaaaacaaagagatGGTCCGAAAGTTGTCAGACtacaacaacaatattttaaacGAAACATTTCTTCACGATGACCTTCACTCAATTTCTCGCCAACGAGAAATTGTCCTTTCTGATCAATCTCCAATGAGGGTCCTCACTCCCCTTTGTCTTACTGAGAATGCAGTCTTGGAAAAGAACAgtaaatttttggaaaatggcGCAGACCTAGCGGTTGAGCTAGAAGAGACAAGAAAGGATCTGGCTAGAGTGGTGAAAGAGCACGAAGGAACAAAACGAAGATGCGAGAAATTAGAGAAACAACTCGAGGAAACTCTTGCTTGTATGGAAACACATCGAACAGCGAGCGTCCATGACAGGGCCACTTCTCCTGGAGAGATAGTGCAATTTGAATTTGAAGGTTGTTGTTATTTCTTTGCAAATGGGCTGAACTGCTCGCGTTGTGACGAACGTAAGGAAGAATGTAACTTGCTGCGAACTGAAAAAGACCTaatcaaagcaaaaaaagagaagttggaggaggaaaataagcaaataaacaGCCGCATCAAAATATTGGGGGACGAACATATGCGAGAAAGGCAAACATTTCAAAAGGAACTGCAAAGCATGAAGGAAGAACATGAAACTTTATCACGAAACTTTGAGAAAGAActgcaaaaaatgctttgtgGAGTAAAAGAACAGCAGTTACAGGAAATGAAAAATCTACAAGTGCAGAACGAAGAACTAAAAGAACAGATAAATAAACACAAATCTGAAGTTCATAAAATAAAGACGGGACTGAGTAGGGAAAAATCACAAGTCGAGAAACACCAAGAAGAGTTccttaaagtaaagaaaaatttgtctcgtgaaaagaagaaggtaaaagaagtgaaagaagaaCTGTTGGTtgaaaacaaggcaaaaaaagaCGCGTTAAaggaagtggaaaaattgatGAGGGAACTAAGCAATCAGGAAGCGGACAAACGTGAAGATATTACGCGACTCCGCGAGGCCGCAAACGTGGAACGCGCCAAGTGCGACactttaaaagaagaaattcaAAGGTTGCGGAGCATGCCAGGCCGCGTTTTAAACTACAGAAAAGATTTCGACAGACATGGTGTTCTCTATGCCCTAGGAACAAACTTTGGTACAACTCCATGGGTGAGCCCCGGTGGTACCAGCGCCTCTCCTACAAGAATAATCGCCACGCGCTCCTCTAATCATGATGAGCACAGTGACGCAATTGATCTGCTTGAAAATCGCAGAGGAAGCTTAAGTGGAACAAAGGACGAAGACAAATCATGGTGGTGTGTAGACTTAAAGGAAAAATACGCTTTATATCTCACCCACTACTCCCTGCGACATGGGAGAGACAATGGAATGTCAATCATTCGTAATTGGCGCTTAGAAGGGTCGCTTGATGAACGTATTTGGAAGACACTAAAAAAGCATGACAATGATCGCGGGCTCAAGGATCCTTTCCCTTACTACACAGCCACATGGCCAGTCGACGGAGAACTGGGGGCCTTTTGGTATTTTAGGATTTTCCAGACGGGCAAGAATTCCTCAGGGAGATTTAGTATTTTTCTTTCCGGTATTGAATTGTATGGAATACTCATAGACGTAGGCGGTTAACGTGTTAACAACTGTTATGGTAGCCAGAGAAAACAGCACTGGATTTCCCGCAAAAttacgtctgaggaacgagcatAAAAATCTcgtactgatgacgtgtcacaacccagatctgggtagtgctttttgattggttgaaataaattccccacgcggcacgaccaatcagaagccacccAGATCGGGgtagtgatacgtcatcagtacggaatttGTGGGTGGGAAAACCAGTCGGGTGGTGTAGCAATGTGTCGGCTGTTTCGGAGGCTGCTGTTTTGGGAAAATCTATGGagctttattttttaacagggaGAGACAATAGTTTAACTTGGCGTTGACAGGAACAAAAAAGTAGCCATTTTCTTTAAGTGGCCTAAAATTTAGCCCCACTGTTTCGAAcatcaagaaaagaagaaaacaactcgATCGACTCGGCCACTTTTCACTTGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619 all species →	CARD	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR001315 all species →	Domain	CARD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47457 all species →	OS05G0345500 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073236372.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.