Gene detail

Detailed information of XP_073238596.1 in Porites lutea

Genomic Location: chr4:23306467...23330211
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073382495.1

GGTATTGCGCATGTTCATTGcaagttcaggaattttcaaaccaaaatggCGGATCTAGACCACTGGATTGACATTGCAAAACAGTGCAAATATCTCCCCGAAAATGATTTGAAGAAATTGTGCGACTACGTTTGCGAATTGCTGCTCGAGGAATCAAACGTCCAGCCAGTTTCCACACCGGTTACAGTTTGTGGCGATATCCATGGACAGTTTTATGATTTAGAGGAGCTCTTCAACACTGGAGGCCAAGTTCCAGACACATCTTATGTATTTATGggTGACTTTGTAGACAGAGGTTATTTCAGTTTGGAGACATTCACAAGATTACTAACATTAAAAGCCAAATGGCCTGATCGTATCACACTTCTCAGGGGAAACCATGAAAGTAGACAGATTACCCAAGTTTATGGCTTCTATGATGAATGCCAATCAAAGTATGGGAATGCAAACGCTTGGAGATATTGCTGTAAGGTGTTTGACCTTCTAACTGTTGCAGCTGTCATTGACGGGCAGATTCTGTGTGTTCATGGTGGTTTATCACCAGACATCAGAACCCTTGATCAGATTCGAACAATAGATCGTAATATGGAAATTCCTCACAAGGGAGCTTTTTGTGATCTTGTGTGGTCTGACCCCGAGGATGTGGATACTTGGGCCATCAGCCCCAGGGGAGCAGGATGGCTGTTTGGTGCAAAAGTTACAAATGAGttTGTCCATATCAACAACTTGAAGTTGATCTGCCGTGCCCACCAGCTGGTCCATGAAGGGTACAAATACATGTTTGATGAGACGCTGGTGACTGTTTGGTCTGCTCCTAATTATTGTTACCGTTGTGGAAATATTGCTTCTATATTAGCATTCTCAGATGCGGATACCCGTGAACCCAAGCTATTTAAAGCAGTACCTGACTGCGACAGGGTGATACCACCCAGAACAACCACGCCTTACTTTTTGTAAATTGCTGTACATATAAATTGACTGGTTGGAGTAGAATATTTTACAAGAGTATCTACGCAGTCGAACCTCTAATAAGTTAGTAAAGGACGCCTGAAGGAGAAGGAAAGATTGAGTGGATCCTGcccctcagttgttcaaaaggtggataacgctgtCCAGCGAGTAAATCACTGTTCACTGGATAATGCTATTgttttccctaatacttatcgttggatagtgatttgtccggtggatagccctatccaacttttgaacaactggggcctggtctGGAACCCTTATGTTAAAGGTTCCAAGTGAAGGACATCAGTGATACAGAGGACTGTTCTGATGTACAGTGTATAGTTCTATATTGATGTCATTTCTGCGGTTAGCATCCAGGTAGTTTGATTTTGAAATGGCTGGTTTTGAACGGTTTTCTGGAATGACAGATGTCGGTCAGTGGACCTCCAGGCGTTGTTCTAGTCTCTACTATACTCAGTTTGTGCGTATACAGTCGTTTTGCATACCTTTTTGGTACGCCAGACAACGTTTGGATATTAAGGTTGGCCAAACTGAAAACGGCTTAAAACGCTATTTTGTTAAACACCGTCTAATCTCTGTTTTAGTGGCCAGCCCTAGGAGTCAAATCATGTCTAAGGGcgtttccaaaagtcagaactggccggctaGACCgggtcattttgaaaataaaacgttagtcttttcttgaaatttttagcggagctctcgcgcgcgaagcgcgccagcggagcaccatgggtaagaaaatgaagtaatctacccatccgagaaaattcggtaatcacgtgaccgtacaccgcccgctcgagagaccgtccgtccgcaccacaggcatatcagtgtaaaataactcaatcaagagatatggcaacccaaatgcaactcgaggttattttggcgggaaatcgcatagccaccggcgtcttgtaaagcagacaCAACAAAAGAGTCAATAGAGACGAAAACGGAaggcggaaattgtttctgtatccgtgttgtctaaagtattaagcttagataaattgtcatgtccacaaatttggaatatagagcaagagagagaaaaagagaaagtgggcgACAgaccagcgaagctcaacgacgACAGGGATTTAgaacgagagataaaaaaacaaaggagacattttttttggttggaagaacaacatgaaaattttgtggcggcggcgacaaaatgagaaatgctagcggccaccaatgcaaggtgaaaatgagcggcagtgaaaaaaagtgaacgggagcacgtacgacatttcctttataaaacgtgtaactaagaagtttcacGATGTAggcgtgcaaaacaacggcaaagaaatgtacaaaaaaagtgtgctgacCAATTAGTGTGCTACACGTGTAAAGTTGcctttgctaattagacctaatgttgtttttcaccgttttcaggCGTTGCATGccgtcgccgcttagcattacacgattttatattttgtttgaacatattataaatattatcgagagcttcgcttttagccctggctaaatctttaTATTACTAAAACGCATCACCGCCCGGCGTGCATACCTTGTAGAAACaaactgatctggctggatagtctATTAGATTAATAGTGGAATTCTTCCGACAACGTTACTTGTCTTGCCGGCTATTTCTGATAAGCTCTATAAGCGTTTTTTGGAAATACTATTATCACACTTATTTGATTCATCAGCGTAAATGTTATGtagttttattaatttgttgtCTTCCTCGCGTAATCTGGAATCACACCACATGTCTATTGAAATTACAGACTTCTACGTTATTGTAATTAAAAGTATCGtatatttgttttcttcttaA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149 all species →	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004843 all species →	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR006186 all species →	Domain	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR047129 all species →	Family	Serine/Threonine protein phosphatase PP2A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45619 all species →	SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0000082 all species →	Biological Process	G1/S transition of mitotic cell cycle	Interproscan
GO:0004722 all species →	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15498	PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit	EC:3.1.3.16	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.