Gene detail

Detailed information of XP_073238653.1 in Porites lutea

Genomic Location: chr4:24788966...24791345
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073382552.1

AAATGCTCAAGACTTGGTGCGTGTTTTCTCTGGTGTATACGTAATGGTGTGTTTTTTACTCGGAAATTGCGGAAGTTTGAAGGAATTTTGCTTTACAAAGGACGTGGACAATTTTCTTATTACTCATTAAAACTGCCAAAAGCGAGTGACGAAGAGCAAGGTCAACCGCAACCTCTGTGCCCCAGTGAAACCTCGCAGCAAACGGGATTGATTGCTTTGGCTTCTTCGATTTCAGTGTCAGCCAATAATATCGTATGACTAAACGAGCCCTTTGTAAAGTTACATTATCGGACAAAAGAATCTAGGCTTATTCAGGGGTTCTTGGAGTAGAAATAGAGTATTAACCCAGTGTTGTGTTCAACAGCAAGTGTGAGTCATCCATGATGTCAAGCAAGCCACCGAATCGCAAACAGTCTTACGAGGAGCGTGCTAGTCCTTATGCCGAAATCACAAGAATCAGTAGCGATCAAGAGAGCAGAGGATGGCAGAACGATATGTTGCAAGCTTTACAGCGGAACGCTACTCCCGAGCCAATTCGCTTAGCATGTATGACTAACTTGCCTTCGAGGCCCTCCTTTTTTCAGGAAGAGTTCCATGGCCGAATTCCACGGGAGAAAGCAGAGGAACTACTCTCTGCAAATGGCCCAGTCAACGGGCGATACTTAGTCCGCGAAAGTAATAGTTCTCCAGGTGATTATAGCCTGTCATTAAGTTACGATGGCCGTATTTTACATTACagattaaaatatgaaaatgaaagatacTTCACCGATGAGAAGGAATCCAAATATTACACGTCGATCACCGATCTTGTTGTAGATGTGCTGAGCATGTATCGTTTGGTACATAATGTTGGTGGACGTGTACcgaaagaagagaagaaaaaaccAAATTCCTTTCCCCACTTATTTAAGCCCCATAGCTACAAACATTTCAAATGGTGTGCTTTTTGTGGGGGATTCTTATGGGGACTTAGAGATCAAGGAATGAAGTGTGAGGGATGTGGCCTCGATGTTCATGGACGCTGCATGAAGCATGTGGGTGAAGAGTGTACTAAAAAGTTGCctgtgaaagaaaagaaagagccGCGTAGAAAATTTGTTCCCATTAGCTCAAGAACAAAGAGTGTTTCCAACGAAATATTCAAGCCTACATGTGAGTATCAAGAGAGTTGTATTCGTTTCCTTACTCATTTGAATATTCCTTCACAATATTTTGCGGTTGATGCTCTGAATCCGTGTTATTGTGAAGAGTGTTGTGTTGATGTTGACACCCCACTGTGTAAAACGGGTGATCCACCTCAAATGTACTCCTTGCCAACTGGATGGTGTCGCTTTCAGCTTGCACCTGTCTGTAGTGAGGCTGAAAGTGATATCATATCATCAACTTGGAACTTGGCATTTTTGTCACTGGACCCAGAGGAAGTAACAGAAATTTTACGGTCAAAGTTTACGGAAAATCGGTCAAATGATTCAAGTCAAGAAGGATCCAAACCTCTCATCAAGTTGACTCCTTCCATTATCTGTGCAGATTTGGATGCTCGTAAGCTAAGGTATGCTGATAGTGACAGTGGGGAGAGCAAAGCTGGCCAAGTTGTACTACAGGCTTACATTGAGCCTTATTCCTACCAAATGATGCGCAGACCAGGATCAACAGAAGAAATTGATCCTTATTTTAAGATGGACTCTATTTACTGGGTGACAAGGCAAGCTCTATCTATAATACCATTTGCACTGCTTGTAAAAACGATGGATGCAACTTACCTTAAATTATAGATTTAAGCAATCTTTATGGGTCCCTTGGTATATTACCTGCAAACAAAATTTCTTCTGTTTAATTGGCTGAGATCTGTTGTATTTCAGCATAGCCTAACTTATCAAAAAATTTTTCAGGTagcataaacaaagttttgatgTCATGATGTGTTTTGATATGTgaccagtgattttgttacctcttcGTCCTGCATCCCTGACACagaaaaatccccaaagatgcaaataattcatggcatgtgTCCTGTAGGACGCAAAGATTGATCAGTCGATATAAGCAtctgtatttgtagaaatatccggCCCATGTGTGTAATAACtctgtaatttctgtggcagttattatggctgttgtttaatgatgcatatttcttttagcctttgttgtgctttaaaatagaaggagtATATTTTAATATCAGTGTAGTGTAATACAGAGGTTTTGAGTCTGTCATCAGATTAACTGTTAGGTTACATAAAAGCCCAGGCGTTTTCAATTTTGGACAGTTTTTTAAACTGGGACTCACTGGTTTGGGACAGGGACTAATGATTTTTAACAAGATGAGTCCctggactcaccataactatttgtaacaaaatcactg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR051854 all species →	Family	Rho-type GTPase-activating protein	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46075 all species →	CHIMERIN FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073238653.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.