Gene detail

Detailed information of XP_073239253.1 in Porites lutea

Genomic Location: chr4:39381603...39403062
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073383152.1

TTGACAGTATGGCCGCCATTTCTGTTTGAGAAAAACCGGTGAATAAAATggcgaaaaaaacaacaacagaaaggGCCGATAAAACGGACAAGCCTGAGAAAGGAAGTACATCTAGTGATAAAGGAGCAGGAGATAAAACACCCGTGGAAAATGCGAAAGAAAACGAGGAACAGCCAGTTGAATTAGAGCCATACACACCAACTGGTAACTTTGAAGTGGATTTCTGTGAGTTATGTACAAGAGCAGGTTTTCCTACTATGCAAGTGGTTCCTCGTCCTCATCGTCCACCAACACCCAGTATCATTCCACAGGACAGCACACCACTGGGCAAGCAGGATAAGAAAGATGCGGATAAATCAAAAGATGACAGTAGTAAGACCGATGAGGCAGGAATGGTTTCTGGTGAACTTGAAGAACCACCGACAACATACAtcatcaaagaaaaatatcattACTTCAAGCCCAGAGTGGAAGTGGAAACTGAAGAGGAGGGTAATAAATCCCATATCAAGGAAATCTACATTCGAGGATGGAAAATAGATGAaagaattttaaacattttgactATAACATTGCCACCACTGGAGAAATTGACCACTATTGATTTTTGGAACACTGGTCTTCAAGACAACAGTCTGAATACTTTAGCATCTATTGCCTCGTCTCATCTACCCAATCTCAGAACTTTATGTCTTGATAACAATCCTGTCACTCTTCAACGATATGGAGTCTTTCTTGGCGAAGAAAGCACGATACAAAATCTCTCTCTGAGAAACTGCTATGTGAATGACATGGGCGCAAAGATGATTGGCAGAGCTTTGACTGCTAACAAGTCACTTACAACGTTGAATCTGTGTTACAACAAAATCACGTGTGAAGGAGCTGGATTTATAGCGAAGggattAAGAATGAATAGAACTCTCCTTTCTCTTAACCTTGGAAGTAATCTTATCGGTGATAACGGAGCATCCAAGTTAGCGGAGGTGCTTTCCAGCTTTTCTCTTTCCCATGAAGAAGTAGTAGCAAGGAGACTTCTTATTTCCAAAAAGAACCCAGAAGAAACGAGTCCATCTAGAAATTTGAACGCTCCAACTGGAGGATCAAAAGACAGACCGGCCAGTGTACGCAGTGGCACACATGCTTCCAAAGAAGACAAGAAAAGTAGAGAAAAGAAGGACTCGCAGAAAAAGAAGgacaacaaaaaacaagaaacagaaaaaacgaaaaaagTTGCTTCGACAGAGGCCGTTAATAAGAGCGTgggcaaaggaaagaaagttAACACGACAAAGGGGGATAAAAAACTCCAACAACCTGAGCAAGAGCAACCAGAAGTTGTGGAGTTTCCTAATCCGCTGCTAGAAATTCCTTTGAAAGAGGAAGGTGGTGAAATTATTATTCCTGGAAACAGAGCTCTTATCAACCTCAATCTGTCAAGGAATAAAGTGGATGTGTCCGGTGTAGAAGCTTTCCTTATTTCAATACAAAGGCAGGCAGAAGTTTCTTCATCAAGCGCTAAACCAACAGGACTCATGAGATTTTCACTGAGTAGGAACCTCTTTCCACCAGACAATCCTCTGTACCAGCGGTTAACGGATCTAATGCAGACACGTGACCCATTTTACAAGCCACCACAACCAAGCCCTGTGGACGAGACTGGTGCCTCTACAAAGGACGAGGCGTGATTGTGGCAGGAAGGATTATTGCTGTAAAGAGAAGCATAGGCCATTAGCAGATTTTAATTCGGCTCAgttgaaagtgagaaaaatcaACGAACCCATTACCCGATTTGTGGTATTTCAGGCCTGTACAGTGCTCACGGAGAGAAGGAAATTATTTATTGTACCCCGAGGTCATTGTACATTATTAGGTAAATAAATTGACACTCAAACGAACGCGTTGACAATTTTCACGTTGttgtaaaaattttcttttttttcaatgctATAAAATggcaatgtattttattgtaagTAAACACTAAAATGTCGGTGGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516 all species →	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR053040 all species →	Family	Leucine-rich repeat-containing protein 71	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46984 all species →	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073239253.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.