Gene detail

Detailed information of XP_073239286.1 in Porites lutea

Genomic Location: chr4:40497489...40523333
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140933580

ATGAAAAAATGGATAGTTCTTCTTGGTGGGGCTCTATTCTGTGTCCTATTTCTCTCCATGTACTTGGTAGTAGATCAGTTAGGACGGCTTCCCACCTCTCAAGAAATCTTCCAAGCTGAGAGAAAACAAAATGTTGAGGATCCTCTGAGAGTTCTTGAAAGGGATATGAGTAAACTAGAAGGGAACTTGAAAAGAACTGGCAAAATTATGAACAGTATGCAGCGAACTGTAGACAAAATAAAATTCCACGGTGGCAAACCAGGGCACAATAAACAGCGTGAAGAATTGTTAAGGAGGACGTCACCAGGCAAACAAGGTGAATCTCTTGAGAGAAGGCCTGAAGTACAAGGTGGAGATGTTGACAATGGCTGTGTGTTCTCAGCAACAGCATCAGGAAAATCAGCAAATGTGAAGATGTTGGATATGTTTGATGTAATGCCATTTGATAATATTGATGGCGGTGCATGGAAACAAGGCTGGGATGTGAAGTATGATGACAGTGAATTTGATAAAGAACAACTTAATGTATTTGTGGTCCCTCACTCTCACAATGATCCAGGGTGGATCAAGACACTAGACCAGTATTACACTCAGCAGACAAGACACATTCTAGACAATGTAGTTGATGCCCTAGCAGTAGATAAAAGAAGAAAGTTCATTTGGGCAGAAATATCTTATTTCTCAATGTGGTGGGGAGAAGTTGATGACAAAAGAAAAAAGCTTGCTCTAGAGCAGCTAAGCAATGGTCAACTAGAGATTGTAACTGGTGGGTGGGTCATGAATGACGAGGCCAATACTCATTACTATGCTATGCTGGATCAGTTGATTGAAGGGCATCAGTGGATTGCAAAGAATCTGGGTTCAGGAATAAAGCCTATGTCAGGATGGGCCATTGATCCATTTGGGCACACACCCACAATGGCATACCTTTTGCGACGCATGGGGTTTCACTCCATGTTAATTCAACGAACTCATTATCAAGTCAAGAAACACCTTGCAAAAGATAAAAATCTGGAGTTCATGTGGAGACAAAACTGGGATCATGGATCATCAACCGATATGTTTTGTCACATGATGCCATTTTACAGCTATGACATTCCCCACACTTGTGGTCCTGAACCCAAGATTTGCTGCCAGTTTGATTTCCGCCGCTTGCCTGGTGGTGGTGTTACTTGTCCTTGGAGAATTTCTCCTGTAAGAATTGATGACAACAATGTTGCCCAAAGGTCACGAATGCTACTGGATCAGTACAAGAAGAAGGCACAACTCTACAGGACAAATGTCTTGTTTGTGCCATTGGGAGATGACTTTCGATATGAGACAACATTTGAAATTAATGCTCAGTATGGTAATTATCAGAGACTGATGGATCATATAAATTCTCATCCAGAGCTAAAGGCCAAGGTGCAATTTGGGACTCTAAGTGACTATTTCAATGCTCTGTATAAAACCACTGGTTCTGCGCCTGGAAGTCAACCAAAAGGTTTTCCTGCCCTAAGTGGGGATTTCTACACATACGCTGATAGGGATGATCATTATTGGAGTGGTTACTACACCTCAAGACCATTTTACAAAAGTATGGACAGAGTTCTGGAGTCACACCACAGAGCTGCAGAAATAATGTTCTCGTTGGCTGAATCACATGCTCGTCACTATGGCAGTTCAAGCTTTTCTGTTGAGAAACTGTATGGCCTCCTGACGAATGCTCGCCAGAATCTGGGCTTGTTTCAGCATCACGATGGCATCACTGGAACAGCTAAAGACTTTGTGGTTATTGATTATGCAACAAGAATGTTACGCTCTTTGAATGACATGCAGCGAGTGATACAGGACTCCTCCCATTTCCTGTTAACATCTGACAAGTCGCACTACAAGTTACCAGACCAATATGCACCTCCTCTAAAGTTTGAGGAAAGCAGATTAGGTCATGATTCATTACCCACAAAAGAAGTCATAGCAGTCTCTGACACTCCAAGGGCAATAGTGTTTTACAATTCCTTGACGACAGCAAGAGAACAGATCGTCAGCCTCCACGTCTCCGATCCAGCAGTAATGGTGAGCGATAGTGATGGAAAGGAAGTTCCAAGTCAAGTAAACGTGTGGTGGGATCACAGGAACAGAATATCAACTGCCAAATATGAGGTCGTGTTTGTAGCCAAAGTTTCACCGCTGGCTTTGACCACATATTTTGTGTCATCAGGACTGGGGTCAAAACTGAACGAACGTTCTGCTATCACTGCATATAACGCACCTGAAACGTCACAAAACTTAGGGGAAGGATTTAAATTTGATGCGAAAGAAGCTGGACGAGAAAATATTGTTTTAGAAAATGTGTTCATGAAAGTTGAATTTGACAGTGTCAGAGGCCTTCTTAAGAGCGTAACGCATAAGGACGATGGAAGTATGACAGAAGTGGCTATTGATTTTGCCACTTACGGCACAAAACCTTCTGGAGATAGGAGTGGTGCTTACCTGTTCCTACCAGATGGTCCTGCCGAGGCTCACGGCCTAGGGGAGCAACCATCGATTTACGTAAGCAGAGGAAAACTGATGCAGGAAGTTCGAGTCGCCCTTCCCAATGTCGTTCATGTCGTCAGAATGTATTCCATATCCGGTCCCGAAGGACGAACTTTGGATATCCAAAACAAAGTGGACATCAGGAATTTCGTGAACAAGGAGTTAGTTATGAGAGTAAAGAGCAACATACTGAACACTAACAGAGACTTTTACACCGACTTGAATGGATTTCAGATGCAAAAGCGTAAAACGATGGATAAAATACCCATCCAGGCCAATTTTTACCCTCTTCCATCCATGGCTTTCCTTCAGGACAAGTCAACTCGTTTGACACTTGTTTCGGCTCAATCCAATGGAGTGGCTGGTCTTCATCAAGGTGAATTTCAAGTTGTTCTTGATCGTCGTTTGTACCAGGATGACAACAGAGGCCTGGGTCAGGGAGTGACAGATAACAAGGTCACTCCAGCTAACTTTAGACTTGTGGTGGAACGATTTAAGACTCCAAATGAACCTAATGGTAGTCCAGTAGCGTACCCCTCCCTCCTTGGGCACCGAATGTTACATCATTTAAACCATCCGCTGTTTACACTGTTCGCTGCTTCTGAATCCTCCGACTCCGAAAATCTGCTGTCAGATTTCAACGGTCTACAGACGGAGCTACCTAATGATATCTTCATGGTCACTTTGCGTTCGGTAGCGGATAAACAGCGGCCTCGTCCCAGTGGCGAGGCTCTGTTAGTGCTTCATCGAGAAGGATATGATTGTAATTTTCAGTGCAAGTGTCTAGCAAAAACAAGCGCAGGACAGGTCCAGTTAAACCACTTGTTCAAGAACCTGTCCATCGACAGACTCCAGTCCACCTCCCTGACAATGTTGCACGAGTACCAGGAACTGGATCCCAGCTCTCCGCTAAAAGTAGACCCTATGGAATTGTACTCTTACAAAATGAGGCTGAAGTGA

Transcript

rna-XM_073383185.1

TAGAATAGACATGTTCCTTTCTCATTCGAAGTCCATAgatttgtttttatagtttttttagCTGACCATGAAAAAATGGATAGTTCTTCTTGGTGGGGCTCTATTCTGTGTCCTATTTCTCTCCATGTACTTGGTAGTAGATCAGTTAGGACGGCTTCCCACCTCTCAAGAAATCTTCCAAGCTGAGagaaaacaaaatgttgAGGATCCTCTGAGAGTTCTTGAAAGGGATATGAGTAAACTAGAAGGGAACTTGAAAAGAACTGGCAAAATTATGAACAGTATGCAGCGAACTgtagacaaaataaaattcCACGGTGGCAAACCAGGGCACAATAAACAGCGTGAAGAATTGTTAAGGAGGACGTCACCAGGCAAACAAGGTGAATCTCTTGAGAGAAGGCCTGAAGTACAAGGTGGAGATGTTGACAATGGCTGTGTGTTCTCAGCAACAGCATCAGGAAAATCAGCAAATGTGAAGATGTTGGATATGTTTGATGTAATGCCATTTGATAATATTGATGGCGGTGCATGGAAACAAGGCTGGGATGTGAAGTATGATGACAGTGAATTTGATAAAGAACAACTTAATGTATTTGTGGTCCCTCACTCTCACAATGATCCAGGGTGGATCAAGACACTAGACCAGTATTACACTCAGCAGACAAGACACATTCTAGACAATGTAGTTGATGCCCTAGCAGTAGATAAAAGAAGAAAGTTCATTTGGGCAGAAATATCTTATTTCTCAATGtggtggggagaagttgatgacaaaagaaaaaagcttgCTCTAGAGCAGCTAAGCAATGGTCAACTAGAGATTGTAACTGGTGGGTGGGTCATGAATGACGAGGCCAATACTCATTACTATGCTATGCTGGATCAGTTGATTGAAGGGCATCAGTGGATTGCAAAGAATCTGGGTTCAGGAATAAAGCCTATGTCAGGATGGGCCATTGATCCATTTGGGCACACACCCACAATGGCATACCTTTTGCGACGCATGGGGTTTCACTCCATGTTAATTCAACGAACTCATTATCAAGTCAAGAAACACCTTGCAAAAGATAAAAATCTGGAGTTCATGTGGAGACAAAACTGGGATCATGGATCATCAACCGATATGTTTTGTCACATGATGCCATTTTACAGCTATGACATTCCCCACACTTGTGGTCCTGAACCCAAGATTTGCTGCCAGTTTGATTTCCGCCGCTTGCCTGGTGGTGGTGTTACTTGTCCTTGGAGAATTTCTCCTGTAAGAATTGATGACAACAATGTTGCCCAAAGGTCACGAATGCTACTGGATCAGTACAAGAAGAAGGCACAACTCTACAGGACAAATGTCTTGTTTGTGCCATTGGGAGATGACTTTCGATATGAGACAACATTTGAAATTAATGCTCAGTATGGTAATTATCAGAGACTGATGGATCATATAAATTCTCATCCAGAGCTAAAGGCCAAGGTGCAATTTGGGACTCTAAGTGACTATTTCAATGCTCTGTATAAAACCACTGGTTCTGCGCCTGGAAGTCAACCAAAAGGTTTTCCTGCCCTAAGTGGGGATTTCTACACATACGCTGATAGGGATGATCATTATTGGAGTGGTTACTACACCTCAAGACCATTTTACAAAAGTATGGACAGAGTTCTGGAGTCACACCACAGAGCTGCAGAAATAATGTTCTCGTTGGCTGAATCACATGCTCGTCACTATGGCAGTTCAAGCTTTTCTGTTGAGAAACTGTATGGCCTCCTGACGAATGCTCGCCAGAATCTGGGCTTGTTTCAGCATCACGATGGCATCACTGGAACAGCTAAAGACTTTGTGGTTATTGATTATGCAACAAGAATGTTACGCTCTTTGAATGACATGCAGCGAGTGATACAGGACTCCTCCCATTTCCTGTTAACATCTGACAAGTCGCACTACAAGTTACCAGACCAATATGCACCTCCTCTAAAGTTTGAGGAAAGCAGATTAGGTCATGATTCATTACCCACAAAAGAAGTCATAGCAGTCTCTGACACTCCAAGGGCAATAGTGTTTTACAATTCCTTGACGACAGCAAGAGAACAGATCGTCAGCCTCCACGTCTCCGATCCAGCAGTAATGGTGAGCGATAGTGATGGAAAGGAAGTTCCAAGTCAAGTAAACGTGTGGTGGGATCACAGGAACAGAATATCAACTGCCAAATATGAGGTCGTGTTTGTAGCCAAAGTTTCACCGCTGGCTTTGACCACATATTTTGTGTCATCAGGACTGGGGTCAAAACTGAACGAACGTTCTGCTATCACTGCATATAACGCACCTGAAACGTCACAAAACTTAGGggAAGGATTTAAATTTGATGCGAAAGAAGCTGGACGAGAAAATATTGTTTTAGAAAATGTGTTCATGAAAGTTGAATTTGACAGTGTCAGAGGCCTTCTTAAGAGCGTAACGCATAAGGACGATGGAAGTATGACAGAAGTGGCTATTGATTTTGCCACTTACGGCACAAAACCTTCTGGAGATAGGAGTGGTGCTTACCTGTTCCTACCAGATGGTCCTGCCGAGGCTCACGGCCTAGGGGAGCAACCATCGATTTACGTAAGCAGAGGAAAACTGATGCAGGAAGTTCGAGTCGCCCTTCCCAATGTCGTTCATGTCGTCAGAATGTATTCCATATCCGGTCCCGAAGGACGAACTTTGGATATCCAAAACAAAGTGGACATCAGGAATTTCGTGAACAAGGAGTTAGTTATGAGAGTAAAGAGCAACATACTGAACACTAACAGAGACTTTTACACCGACTTGAATGGATTTCAGatGCAAAAGCGTAAAACGATGGATAAAATACCCATCCAGGCCAATTTTTACCCTCTTCCATCCATGGCTTTCCTTCAGGACAAGTCAACTCGTTTGACACTTGTTTCGGCTCAATCCAATGGAGTGGCTGGTCTTCATCAAGGTGAATTTCAAGTTGTTCTTGATCGTCGTTTGTACCAGGATGACAACAGAGGCCTGGGTCAGGGAGTGACAGATAACAAGGTCACTCCAGCTAACTTTAGACTTGTGGTGGAACGATTTAAGACTCCAAATGAACCTAATGGTAGTCCAGTAGCGTACCCCTCCCTCCTTGGGCACCGAATGTTACATCATTTAAACCATCCGCTGTTTACACTGTTCGCTGCTTCTGAATCCTCCGACTCCGAAAATCTGCTGTCAGATTTCAACGGTCTACAGACGGAGCTACCTAATGATATCTTCATGGTCACTTTGCGTTCGGTAGCGGATAAACAGCGGCCTCGTCCCAGTGGCGAGGCTCTGTTAGTGCTTCATCGAGAAGGATATGATTGTAATTTTCAGTGCAAGTGTCTAGCAAAAACAAGCGCAGGACAGGTCCAGTTAAACCACTTGTTCAAGAACCTGTCCATCGACAGACTCCAGTCCACCTCCCTGACAATGTTGCACGAGTACCAGGAACTGGATCCCAGCTCTCCGCTAAAAGTAGACCCTATGGAATTGTACTCTTACAAAATGAGGCTGAAGTGAAAGTGGAGTTTCCTAGTAACGTTATGAATGTTTCGTGGTACATGAGCAACTCAAGGGATGCATTCGTCCCCAGTTAAAACCGTGGTTTACTGGCGGGCAAGGTTTAAGTGAAAGAAAGGCTGGAACAagtttttaactattttctcGTCAGTAGCAGAGGCAGATTCTAGATTTTGTACCGTAGTCCGTAGATATAGCACACTTAGCTAAACAGACTATAAAAATAACGCAGCGTTACACCAATTTTTCATAatagcaaataataataaataaagctaacgaaggaaaagcaaaaacgaCAAGGAGAAGGGAAAAAGCAGTAACAATGACTACAACCacaacaaaaaagaaggacAAGAAGACAGtgtaaaaaaattgtatattaaaatttgtttagcCACAGACTACTTAGGAGTTCTTGTGAACTctttgaaacgtgtccgtgcgttccagatcgaattggaatttggaagtgttgttTTCAGCGGTGAAAAACGCAACCGGGGAGAGAACT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01074 all species →	Glyco_hydro_38N	Glycosyl hydrolases family 38 N-terminal domain	Domain	Interproscan
PF07748 all species →	Glyco_hydro_38C	Glycosyl hydrolases family 38 C-terminal domain	Domain	Interproscan
PF09261 all species →	Alpha-mann_mid	Alpha mannosidase middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037094 all species →	Homologous_superfamily	Glycoside hydrolase family 38, central domain superfamily	Interproscan
IPR000602 all species →	Domain	Glycoside hydrolase family 38, N-terminal domain	Interproscan
IPR011013 all species →	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR050843 all species →	Family	Glycosyl Hydrolase Family 38	Interproscan
IPR015341 all species →	Domain	Glycoside hydrolase family 38, central domain	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR011682 all species →	Domain	Glycosyl hydrolase family 38, C-terminal	Interproscan
IPR028995 all species →	Homologous_superfamily	Glycoside hydrolase families 57/38, central domain superfamily	Interproscan
IPR011330 all species →	Homologous_superfamily	Glycoside hydrolase/deacetylase, beta/alpha-barrel	Interproscan
IPR027291 all species →	Homologous_superfamily	Glycoside hydrolase 38, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11607 all species →	ALPHA-MANNOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004559 all species →	Molecular Function	alpha-mannosidase activity	Interproscan
GO:0006013 all species →	Biological Process	mannose metabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0006491 all species →	Biological Process	N-glycan processing	Interproscan
GO:0006517 all species →	Biological Process	protein deglycosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01231	MAN2; alpha-mannosidase II	EC:3.2.1.114	Various types of N-glycan biosynthesis	ko00513	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.