Gene detail

Detailed information of XP_073239293.1 in Porites lutea

Genomic Location: chr4:40630374...40647185
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140933587

ATGTCAATAAAAACCTGCAAAGAACTTTTGCTACCAGAGATCTGTCAAAGATGTGGCATTGATGTACCAGTTGAAAATCTCAGAATGAGAAGAAAAAACTGGAAAAATCCTGGAAGAGTCTATGTTGACAGCCAAGTATTTGAAGAAAACATCCAAGTATATGCAAGCTTTGAAGTGTTTCTGGAAATACTAGAAGGTCCTGAAAGAATGACCTCAGCTGATCAACTGTCATTGTATGTTAGACATTGGCATCCTTCGACATTAACAATTGACCCTCCAAAAGAAGTTGTTTTAGAGGAGAGCTTGGTTGAACATTTAAAGGAAGCGATGAGTACTCTTGGTGGCATTCCAGTGGAAAATTTAGAGTTTTGCAAGGGCCGTGGACAGTTCCCTTGTGATGCACCAGTCCTTGAAATTCATGGAAATGATTTTGGTTGGACAGCTGATGTGACATCTCTTGGGTCTAGTCCTTTATTTATCAATGACGATGGAGCAGTGGTATTTTACAGAGATAAAACAGAACATCTAATGAAAATATCCGAAGAAAAGAAAAAGGAAATCATGAAAAAAGAAAATACCAAGCAGGTCGCTCCAGAAAGAAATGCTAAATTCCTGGAGCAACATGACAAATTGAGGCATTTGGAAGAAGTGGAAAGAAAGAGAAGAGAAATGGAAAGGTCCATGTGCAAGATAAAGATCTTTTGTGAACATCCAATCAGGAGGACAATGTTAGAGCAAAACTTAGAAATTAATAAGGATAGCACACTGAATGAGGCGGTAGCCATTGCACATAAGCTTTTCCATCTGGACAAGATACTTCCTGTTGATCAATGCAGAATTGTGAAGTATGATGAATACTATGACTACATTGAAAGGTCATTTGATGGAGAAGAGAATGATCCAATGGGAAAGGTCCTCTGTGGAGTGAAGCAGTCCTACATGTTTGACCTCCTCCTTGAAACAAGAAAGCCACATGAAAAATTTGCTACGTACAAACATGGTGAAACTATAGAGGATCTACGTGGAGCAAGCGTACAAACGCCTGCAGCTGGTGGAGACTTCCCAAGGCCATCAAGGGAAATACGGCAGCGCGAAGCAAATTTAGAGAGGCAGCTCAGAGAGATGCGGCAACGTGAAGAACATTTGCAAAGACAACTGAGGGAGACACAGCAACGTGAAGAAAACTCACAAAGGCAGCTCAGGGAGATGCAGCAACGTGAAGGAAACTTACAAAGACAGCTGAGAGAGACACAGCAACGTGAAGGAAACTCACAAAGGCAGTTGAGAGAGATGCGGCAACGTGAAGAAAACTCACAAAGGCAGCTGAGGGAGATGCAGCAACGTGAAGAAAATTTGCAAAGACAACTGAGGGAGACACAGCAACGTGAAGAAAACTCACAAAGGCAGCTCAGGGAGATGCAGCAACGTGAAGGAAACTTACAAAGACAGCTGAGAGAGACACAGCAACGTGAAGGAAACTCACAAAGGCAGTTGAGAGAGATGCGGCAACGTGAAGAAAACTTACAAAGGCAGCTGAGGGAGACACAGCAACGTGAAGGAAACTCACAAAGGCAGTTGAGAGAGATGCGGCAACGTGAAGAAAACTCACAAAGGCTGCTGAGGGAGATGCAGCAAGGTGAAGAAAATTTGCAAAGACAGCTGAGAGAAAAAGACCAGGAAGTAACTGAGCTAGTGTTAAGTCTTTCCTCAGCTCAGCAAACAATAAGTGAACAGCAACAACAGGAATCATGCGACTGGGTCATTTCCCGCGATGAAATTCAAAAGACCAATAAATGCCTTGGCAGGGGAGGCTGGGGAAGTGTTTATGAAGGCGTGTATTGTGGCTGTACTGTAGCAGTAAAGCAAATTCATGATCTGATTCTTTCCCCTCATAACATACGTCTTTTTGAGAGAGAAGTGAATATTGCATCCAAGTGCCGCCATCCTCACTTGCTTCAGTTCATCGGCGCCACTAAAGATGAGGGAAACCCTCTGTTTGTGACGGAGCTGATGGAGAAAAGTCTGCGAACTCTGTTAGAACAGCGGCAACTCTCCGAGATAGAAATACGCACCATTTCTCTGGATGTAGCCCGAGCAATTAACTACCTTCATGAAAAGAAACCAGAGCCCATCATTCACCGGGATGTGAGCAGTGCTAATGTGTTGCTATGGCGACAGGGTGACCAATGGAGAGGCAAAGTGTCAGATTATGGCACTGCTAATTTCATTCAGCAGGCCATGACAGTGGCTCCTGGAGCTGTGATTTACAGTGCGCCTGAGGCAGTTACATCAAACCAAACAGTCAAGGTTGATGTTTATAGCTTTGGTGTTCTTCTTTGTGAAATGTGGGTCCGGGAACTTCCAGATCCTAGAAGGCGTGAACAGCAAGTTCTGCTCATGACGAACCATGTGTTGAGAGGCCTGGTACGGCGATGCCTGCAAACCGATCCTGAAGCGAGACCAACCATGCAGAGGATAATCGATGAACTATCTAGAGCTGTGTAA

Transcript

rna-XM_073383192.1

AATGTCTACCAGGAAAATCAGGTGATTGtcataatattatcattaataataCTTATTATTTAAAGGACATACATGTTTCGTCTTTCAGCCTTTCAAATACATTTGTGATTGGATAGCAAGTGACGGGATGTCAATAAAAACCTGCAAAGAACTTTTGCTACCAGAGATCTGTCAAAGATGTGGCATTGATGTACCAGTTGAAAATCTCAGAATGAGaagaaaaaactggaaaaatcctgGAAGAGTCTATGTTGACAGCCAAGTATTTGAAGAAAACATCCAAGTATATGCAAGCTTTGAAGTGTTTCTGGAAATACTAGAAGGTCCTGAAAGAATGACCTCAGCTGATCAACTGTCATTGTATGTTAGACATTGGCATCCTTCGACATTAACAATTGACCCTCCAAAAGAAGTTGTTTTAGAGGAGAGCTTGGTTGAACATTTAAAGGAAGCGATGAGTACTCTTGGTGGCATTCCAGTGGAAAATTTAGAGTTTTGCAAGGGCCGTGGACAGTTCCCTTGTGATGCACCAGTCCTTGAAATTCATGGAAATGATTTTGGTTGGACAGCTGATGTGACATCTCTTGGGTCTAGTCCTTTATTTATCAATGACGATGGAGCAGTGGTATTTTACAGAGATAAAACAGAACATCTAATGAAAATAtccgaagaaaagaaaaaggaaatcatgaaaaaagaaaataccaaGCAGGTCGCTCCAGAAAGAAATGCTAAATTCCTGGAGCAACATGACAAATTGAGGCATTTGGAAGAAgtggaaagaaagagaagagaaatggAAAGGTCCATGTGCAAGATAAAGATCTTTTGTGAACATCCAATCAGGAGGACAATGTTAGAGCAAAACTTAGAAATTAATAAGGATAGCACACTGAATGAGGCGGTAGCCATTGCACATAAGCTTTTCCATCTGGACAAGATACTTCCTGTTGATCAATGCAGAATTGTGAAGTATGATGAATACTATGACTACATTGAAAGGTCATTTGATGGAGAAGAGAATGATCCAATGGGAAAGGTCCTCTGTGGAGTGAAGCAGTCCTACATGTTTGACCTCCTCCTTGAAACAAGAAAGCCACATGAAAAATTTGCTACGTACAAACATGGTGAAACTATAGAGGATCTACGTGGAGCAAGCGTACAAACGCCTGCAGCTGGTGGAGACTTCCCAAGGCCATCAAGGGAAATACGGCAGCGCGAAGCAAATTTAGAGAGGCAGCTCAGAGAGATGCGGCAACGTGAAGAACATTTGCAAAGACAACTGAGGGAGACAcagcaacgtgaagaaaacTCACAAAGGCAGCTCAGGGAGATGCAGCAACGTGAAGGAAACTTACAAAGACAGCTGAGAGAGACACAGCAACGTGAAGGAAACTCACAAAGGCAGTTGAGAGAGATGCGGCAACGTGAAGAAAACTCACAAAGGCAGCTGAGGGAGATGCAGCAACGTGAAGAAAATTTGCAAAGACAACTGAGGGAGACAcagcaacgtgaagaaaacTCACAAAGGCAGCTCAGGGAGATGCAGCAACGTGAAGGAAACTTACAAAGACAGCTGAGAGAGACACAGCAACGTGAAGGAAACTCACAAAGGCAGTTGAGAGAGATGCGGCAACGTGAAGAAAACTTACAAAGGCAGCTGAGGGAGACACAGCAACGTGAAGGAAACTCACAAAGGCAGTTGAGAGAGATGCGGCAACGTGAAGAAAACTCACAAAGGCTGCTGAGGGAGATGCAGCAAGGTGAAGAAAATTTGCAAAGACAGCTGAGAGAAAAAGACCAGGAAGTAACTGAGCTAGTGTTAAGTCTTTCCTCAGCTCAGCAAACAATAAGTGAACAGCAACAACAGGAATCATGCGACTGGGTCATTTCCCGCGATGAAATTCAAAAGACCAATAAATGCCTTGGCAGGGGAGGCTGGGGAAGTGTTTATGAAGGCGTGTATTGTGGCTGTACTGTAGCAGTAAAGCAAATTCATGATCTGATTCTTTCCCCTCATAACATACGTCTTTTTGAGAGAGAAGTGAATATTGCATCCAAGTGCCGCCATCCTCACTTGCTTCAGTTCATCGGCGCCACTAAAGATGAGGGAAACCCTCTGTTTGTGACGGAGCTGATGGAGAAAAGTCTGCGAACTCTGTTAGAACAGCGGCAACTCTCCGAGATAGAAATACGCACCATTTCTCTGGATGTAGCCCGAGCAATTAACTACCTTCATGAAAAGAAACCAGAGCCCATCATTCACCGGGATGTGAGCAGTGCTAATGTGTTGCTATGGCGACAGGGTGACCAATGGAGAGGCAAAGTGTCAGATTATGGCACTGCTAATTTCATTCAGCAGGCCATGACAGTGGCTCCTGGAGCTGTGATTTACAGTGCGCCTGAGGCAGTTACATCAAACCAAACAGTCAAGGTTGATGTTTATAGCTTTGGTGTTCTTCTTTGTGAAATGTGGGTCCGGGAACTTCCAGATCCTAGAAGGCGTGAACAGCAAGTTCTGCTCATGACGAACCATGTGTTGAGAGGCCTGGTACGGCGATGCCTGCAAACCGATCCTGAAGCGAGACCAACCATGCAGAGGATAATCGATGAACTATCTAGAGCTGTGTAACTTCCATCTAGTATTTtgtcagaatttttttaaaactttcgtAGTTTATAAAGTTGAATCGGTAGAAATCTTTAGTGCGGAAATTAGTGTGTAATCGTTTATCGTGACAACGTAACTTAGTTTACCCAACTGTTGCTAGAAAACAAATTACTCAGGTTGAAAACAGATTTACAACttatttgcttttaattta

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF19718 all species →	USP47_C	Ubiquitin carboxyl-terminal hydrolase 47 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050167 all species →	Family	Serine/threonine-protein kinase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR045578 all species →	Domain	Ubiquitin carboxyl-terminal hydrolase 47, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257 all species →	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073239293.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.