Gene detail

Detailed information of XP_073241003.1 in Porites lutea

Genomic Location: chr4:3760686...3767436
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073384902.1

CCGCACCCTCGTGGAAGTGTGGGAAGGAAATCGAAGTGGAACCCGTAAAGTAGACAAGTTCGCCATGATTTTGCGGCTAAAATTTAGATAAGACAAACTGTATCGTGTACTGCTGTCGATCGGAAGAACTCCGTAGAGTACAATGAGCGAGTTATGGGTGTGTTTTCCTTGTTGTGTTACCGAGCAACCTCAACCGagaagaagaaaaatagatcGTTCCATGATTGGGCAGCCAACGAATTTTAAACACACGGGTCATATAGGAAGCGGCGATATGGCGTCCGGCTCAGACctCGGATCAATTCAAGTCCAAATGCAGTCGAAAGGAGGCTACCAAGGAATCAGTGTTCCAATCAGCTCGACTCCCGCTGGGATTCCTGTAGTGGGAGGAAAttaaaatcttacttttgtAGAAAGAATAACAtttgtttaatttttcaaggAATCAACAAGAAGACAAATTTCATGCAAAAAGACATCACAGAGAGAAAAATGCAAGGACAATAGACAGAATATTTGACCTAATTTGTTATTAAACATAGAATAGCGAGTGTTGTTGATTCCACAATATTGTAAATAACTAAGCCATCAAATTAGTATGTTTTATATGACCTTAGAGTTAGTTTCATAGCTTGACATGTAAGGGTAAGATCGTCAGGCCAGCCCTAAAAGTTAGCTGTGTATCATAGCTAGCTTAGACTGGTTGTTGATCAACATTGAATGGTCTATCCTCTTCGATGATCCTTTCATGCAGGGAATTGTGAAAGTTCGACACAGAAAACAAACCTGTTGTCGCTCCAGGGAGAATGTTCCTCAATAGGTAGAGTGCATTCAATTGAGGGCATTGAAAATGAGGATAGAAATTAAGAATTTTGTGTGGTTTGGTAATATTATTACATTCTGTACACTGGGCAATATTTAGATGGTATCTTTCCAGCCATGTTTCCAACCATCTGAATTCTACAATTCACTCAATTGAATGCACCACTATAAGCATGTGTACCTAAGAATTTGTCACTAATATTTGAAAGAAAGGATTAAAGTGTATAGGTACTAGATAGTCTTTTGGATCGCAGGCCGGAGATAATTAAACATGTTTGCCATTTGTTTGGTTGAGGATAAAGTGCACATGCATTCCATGTCATTGTACAAAGTAATTTCCCTGATTTATTGGAGCTACCGGTAGTTATAGTGCAGACAGTTGGGCATGTCATGTTTTAACCACATAGTTATATTATTTTGGTCAgtttatcttttgtttctgttttattttaccAACCAACCTAGAGTTGCTGTTGTTTGGTTTGATTATTCATACAATATTTCTAAAGATCAAGTCAGTGATCATTGTAAACATTTAGTGTTCACCATACATTGTACACCACAAATTGTTAGCTGGGACTCGCCTTTATAGTACGTGTTTTAGGCCAGACATAAACCAGGGACACAATGCAGCGACACATCCCCTGATTTGACATGGGTTTACATAAAATCCTGTGGCAGGGACATACATGTAATTCTATCCCTGCAACATGTTGGGTGAAATTTCAACTGGTTTGAATTTGCGTGTCATGAAGCAGGGACAAGATGTGAAGacaagtccccccccccctttcctgGCAGACATTGTGTTGTGTTGACAAATCTATTGTGAGGACAAAATTTATCTCTGCAACATGTTTCATTAAATTCAGCTGGTTTGAGTTTGTGTGTCATGAAGCAGGGACATGATGCAGAGGCAAGCCCTCTGATCTGGCTTGATTTTATGAAAAGATTCCTTGTTTTGGGGGACAAGATTTTTACCCCACAACATGTTGCAGCACGAAATTCAGCTGGTTTGAATTTGTGCATCATGAAGTGGGTACATATGACCATATCATTGGCACTGTCCCTGCCACATCTTCTCTTGCATCTATGTCCTGGCTTTTATCACATTACTGTAAAGTATGTTGGGTAGCCCTGTAAGCCCTAATAGAGACTGTAACATCTAATTTTTCCTTATATTTGTCGCAAAACTAAAGGAGGAAAAAGAATAAGTAGTATTGTCATAAGGGCCTTAAGAAATGTTTGGAGAACACTGTGAGGAAATTCCCTTTTAGTGGATAAGCGAAGGTTGCGGCTTAAATAGTCTCTCTCTGCCACAGAGGTTTGTTGGAGCATTTGTGTTTAGTAAGTGCAGTCGCGAATGCGAAAAGATCTTCAAGTAGCTAATTTAACACTTGCCCTTGCTTTTTCAATGGATTttctctaaatgaaaaaaaccCCATTGAACCTCTAAGCAGCAGAGATCCAAAAGAGAGGCATTGGGACTTGTCAGTAAGCTTCCTGTCAACTGTTGCAACACCTTTAAGTCctgattaattattattaattttttcttgtttgctgtTTGTGCCGTGTGCTCACCCACCAATTTAGTTTGCCCATTCCTGGATGGAACTGCAAAATGCAGTTGTCTATCACAGCATTCTCAAACATTTTTCACATACTTTTCATACAGTACTAGTTAGGAGAAATATTAAAGATTGATACAAAGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00786 all species →	PBD	P21-Rho-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036936 all species →	Homologous_superfamily	CRIB domain superfamily	Interproscan
IPR000095 all species →	Domain	CRIB domain	Interproscan
IPR039056 all species →	Family	CDC42 small effector protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13502 all species →	CDC42 SMALL EFFECTOR PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0035023 all species →	Biological Process	regulation of Rho protein signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073241003.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.