Gene detail

Detailed information of XP_073241815.1 in Porites lutea

Genomic Location: chr5:94345...101224
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073385714.1

TGTATGTCGTGTAAGCAGAAATGACCCATCACTTCGTTTAGCATAAACAAGACGCCACTTCAGCGTTACCgcgtctttttttaaaaatacatgtagttgAAAGGGATGCCCAGACAAAGAAAAGTTCCTGCAAGATTTAGAGATGGGGCAAATCCAGATGAAATAGAAACTGAAGGTGACAGTAGTGGTTCAAATCCTGATAGTCCACAAAAAAAGCAGCGAAAAGAGAGTTCTGGTTCATCGGATCTTGCCAGCCCAGTAACTGCCTTACCACAACAACATTTCGGAGTGCCTCCCTATGTCACAGCTGAACCCACAATACATTCACGTTCAATGGAGGGAACTACAGATATGAACCGATCTAACCTCACTATAGACCCAGTGTACCCCTGTGGTATCTGCAAGAGAGAAGtaaatgacaatgatgatgCTATATTCTGTGAAACAGGCTGTTCACAGTGGTATCACCGTGTATGTACCGGGCTGACAGAACTGGCTTATGACCTACTTACTGCTGAGGAGAATGCCGAGTGGGTCTGTGATAACTGTATAGCAACCAAAACCATTCCATTGGTCAAGTTGAAAAGTTGAGTGGTGCACATAAACTTCAGATAAATGATTTTTTGTACAGTTTCATTTTGTCAAGCCTGACCTTTCTTCCACccgaaacaacaaaaaatattaagaaaatacGTAGAAGTGTCAGGTGCATCACCAGTTTCGGACCTCCCAAGAATACCTTAGTTGATACAAGACTTAAGTGCCGATCATGTGGTCTCAAACTAAtgcagtgctgtcaactctcctggATAATCTGGCAAGACCAGATTTTGGACCatatctcccggtctccagattagagtttgaaatctcctggataatctttgaagtttgccatttcttcatTTCAGTAGACACAACTTTTTGacagtttaaaaaatttcaactatTCTGCTTTGTCTTAGCTATTTTAATGTTAACATCAAACATTTCCTTGTAAACTCCTGTACTGCCATTTTAACTTGATAATAATGAcatgtgattggtgggaagtaagAATATTTGCACAAGTGAAAGATGTttggggttgacagccctgctaATGTTAATATAATCGCCGGCCCCCAATAAGATCTATTgctatattcctagacttttactcaactaaacagggactgccattggttgattcttggtcacgtggccttgactaataTCCCCATACATTAACAATGTACCCCACTGgggatacattacagcaagTGATCAAAGCACGGTGCAGAGTGaggtgacagaaggcgggaaaaacactgccagttttcttttgcGTGAAttaacacaacaacacaaacaggAAGCCTCAAGATAAAAAGCAACAATTTTTAAATctatcccagaagagaaacagcagcttgTGGAGAAAAAAGATAcacataatataaggaaagtactttgtaaatcatttattcagtggttttgagaactaaatttgtgtttttttaagtaCTAAGTCGACTGTTCTGGTTCATTTCGGTTaatcttttgttgctgttgaagtgaaagtctagaaatataacaaaacacttaatgtcaggtccctcgggaaaccagttagttttgttttccctcgagtcctgatgtttcccaaGACGAAgtcgagaacaaaaaaaacaaaactaactgttgaaaccaaaactaactgtttccctcgcgatctgacattaagtgtatattgTAGCACATAGCCAGGCTAGTTTCCTCGGAATACTGTTTAGCTTATCTTATTATCAGTGAATCAAAGActttaaaaattcaaagaatTAGCCAATGGCTTAAGTGGCTGCTACCGTACCCCTTTTATTGAATTCCTTTATTCTGGAAATAAATATGAAACTTTTTAACGTTATAAACTATTCTTAGTGTCAAAATAATATGTATACAATTCGGTTAGAGTAAtcgtgaaataggtagtagaatactaaTCGCAGTATAATGCACTAATCCTATCGTCTTCTGTTGTTTATTTGTAGCTATTTTGCACTAGTTGCTATTACctgtttcacggttcaagtaaaatcactctaacaGATCATTTCATCACTTACATCCTTTTTGTAAACTTATACCAActtgtaaaatttttaattatagtgtttttttttttctagaagcGTCATTgattatttaaacattttttacagAAATGTCAAATAAGTCACTGTTTTCCAGACATCACTTCGTTATACTGAACATAAAATATGTATAAACTACCTATGAAAGTCAGCATATTCTGTTAGTGTTTCAAAGAAACCTATTCTCTGTATTTGATGCAAAGTAAAAAGTCTTGTTACCGTA

Protein

Gene family

Family type	Membership / link
Ubiquitin family	E3\|E3 activity RING\|PHD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00628 all species →	PHD	PHD-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan
IPR019786 all species →	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR052475 all species →	Family	Wnt Signal Transduction Protein	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23194 all species →	PYGOPUS	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_073241815.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073241815.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.