Gene detail

Detailed information of XP_073241930.1 in Porites lutea

Genomic Location: chr5:317447...340308
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140936363

ATGGAAGCATGTCTAAAAGAGGAATTGCCAGCTACTACTGAACTCGAAGAGGCATTCAGAAACGGTGTGTTCTTGGCAAAGCTGGGTAATTTCTTTTCTCCAGAGACGATTCCTCTGCGCAAAATATTCGACAAAGATTTTAAAGTTTTGAACTCTCGAGGTCTCCACTTTCGCCACACGGATAATATTAATTTCTTTATAAATGGTTGCAGTAAAGTTGGTCTTCCAAAGGTTTTCTTTCCTGAGACGACCGACATTTATGATAGAAAGAACATGCCAAAGCTGATTTATTGCATTCATGCTTTAAGTTTGTACCTGTTCAAGTTAGGATTGGCACCACAAATACAGGATCTGTATGGCAAGGCCACATTCACTGAGGAACAGATTAGTGCTATGAGAAAAGAGCTGGAAAAATATGGAATTCAAATGCCAGCATTTAGCAAGATTGGAGGCATTTTAGAAAGTGAGATGCCTGTGGATGAGGCAGCTTTACATGCTGCAGTGATTGCTATAAATGATGCAATCGATCACCAAGATGCTGGCAATACTTTGGAAGCTCTGCGTAATCCTAATGCACACCTCAGAGATGTAAATGCTGAGAATTCAGAACCTTATCAATCTGCTCTGTATCAGGCAAAGAGTACTAAAGCTGCTCAAGCCATAGCTAAGTCTCCAGGCAAGGAGGGAATGGATGTCTATGACACATTATTAACCCAAGCTGAAATACAAGGAAACATCAGTCAAGTTAATGATGTGATCAGAAAACAAAAAGCAGAAGAAGCATTGAATCAAGCTGTGAAAGAAATCAATGGAGCTATCAGTAGCAAAAATGAAGAAGTTCTTTTGCCAGCATTGTGCAACACGGCTGCCAGGCTATCTGGTGTCTCAACTGAAAATGGATCTTGGTATATGAAGATGCTGGGAGAGAAAAAGGAGATAAAAGAACTGCAGGAATCAGGCATCTCAGATCTCACAAAAGCTGAAATCCAGGAAGCAGTGAATGCTGCTAATGACTTAGCAGATCAACACAGGCAAATGGAAGACATAGTTAAGCGCATAAACAAATCTTTAGATGATGGAACTTCAGAAGAAACCCACAACTTGGTTCGAAAACCTGAAGGAATGTTTCCAAAAGTGCTTCCAAGGAGTGCTTTCCTCTACCATGATGGGCTGTTTAAAGGCAAACAAGAATGTGAATCACTGACTCATGAGCTTATCTGTGAGCAGTTAACAGTATTGACAGCTGTAGCTTCCATAAATGAAGCAATTGAAAATGAGAATTCTACTCAGTTAATTAATAGAATGAACCACCCCAATGCTAGCTTGACATCAGTTGAAGACAGTCTGTGTAACAGATATTTGTCTCATTTGGTGTCCGTTAAGGAGGAGAAAGCACAGGACTGTGGAGTAGGCAAAGATGATCTTACTCAGATTGAACTTCAGATTTGTGTGGACTTTGTGAACACTGTAGTCCAAGATGAACATGACTTAATATCAGCAATAGCCGTGATCAATGAAGCCATTGACAAGGGTGATCACAACAGCACATTGCAGTGCCTTCATGCTGAGGCTGCCAAGCTTTCAGGCATCACATCAGAGAATAGCCAACTCTATCAGAAGGTTCTCTACTCTCAAAAGATCGCTAAAGCTCAGAAAACTGATGAAGATTCAGCAGAATTATGGCATGATGAGATTCAGCTTGGCTTGGATTATGCCAATAGGCACGCAGATGAGGCCAGGCAGTTGGCAGAGGGTGTCACTGCAGTAAACCAAGCTGTTGATGCAAATGATGAGAAGTTACTGATGGCAGCCCTGACATACCCTCGTGTCAGCATCTATGGTGTCACCTCACAGTGTAGTCAGCAGTACCTTGAAGAGCTTACAAAACTCAAAGATGCAAAAAAACAACCAGAGACTGATACCAAATGGCTGGAACAGAAGACACCTCAGGGACACATGTATTATTATAATACTGAAAATAATGAAGGCTGCTGGGAAAAACCTGAAGACTTCAGTAATTCATCTCTGTTAACAAGGGAAGAAATTCAGGGGCTGATATCACGAGTCACAGCCCAATATGATCGATGGGTGCATATGCAGTCCAATGAACCTTTGATCATCAAATTACAGTCTCACTGGAAAGGATACTTGGCTAGAAGGGCTTACCATGAAAGAAGAACTTTTTTAAAGGAACATTTACCAGCTGTTATTAAAATCCAGGCATTTGTTAGAGGATTTATTCAAAGACTGAAATACCAAACAAGGCTACAAGAACTGAGGAGTCACCCTGATGAAGTCATTAAGATTCAATCTTGGGTGCGCATGTGGATTGCCAGAAGGAAGTACCTAGAAAGAAGGAAATACTTCAAAGACCATGATTCTGCAATAGTGAAGATTCAAGCATGGGTGAGAGCCAATGTGGCTCAAAATGACTATAGAAAACTTATTTCTATGCAAGATCCACCATGCAAGACTGTAAGAAAATTCCTTCATCTTTTGGAACACAGTGATGCTGACTTTGAAGAAGAGCTAGACCTTCAGAAGTTAAGAGCTCAAGTTGTAACAGAGATCAGATCAAATCAGCAGTTGGAAAATGACCTGAATCTTATGGACATCAAGATAGGACTTCTTGTTCGGAACAGAATCACTTTACAGGATGTTATACATCATGGAAAGAACTTGAAGCGTGAAAAACAAGACATGAGTACGGCTTTACAAAGAACAAAAGGAATCAAGTCTCTTAGTAAAGAGAGCCATGAAAAGCTAGAAGCTTATCAAAATTTATTCTACCTGCTTCAGACAAACCCAGTTTACCTAGCGAAGCTGATTTTTGCAATGCCGCAGAGTAAATTTACCAAGTTTATGGAGTCTGTTATATTGACATTGTACAATTATGCTTCTAATGCACGGGAAGAGTACCTGCTTGTGAAGTTATTTGATACTGCTCTCAAAGAAGAAATCATTTCAAAGGTGGACCAGATGCAGGACATAGTGACGGGAAATCCGGCAGTCATTAAAATTGTGGTACACTTTAACAGAGGACAGAAGGGTCAGAGTTCACTGCGTGAGCTGCTGCAGCCATTAGTTGAAGGTGTTCTTAATGACAAAAACCTGTCAATAAATACCAACCCCCTTGAAGTGTATAAAGCATGGATAAATCAAATGGAATCAGAGACTGGACAAGCCAGTAAGTTGCCATATGACGTTGAGCCAGAACAAGCCCTCAAACATCCCGAAGTGAGCTCCAGAATAGAGGCTGCTATGAAGAGTCTTACAACTGCAACAGATACCTTCTTGAATTCTATTCTTCAGTCTGGTGATAAAATACCTTATGGTTTAAGGTATGTTGCCATGTCTTTAAGAGTGGCTCTTGCCGAAAAGTTCCCAGAAGCGCCAGAGGCAGAGATATTGAAGGTTGTAGGTAACCTGATCTACTACAGATACATGAATCCTGCTATAGTGGCCCCTGATGCATTTGATGTGGTGTCTTTTGGCGTTGACAAAGGCTTGACACCAGACCAGAGACGAAATCTTGGGTCTATCGCCAAAATCCTTCAGTATGTAGCCTCAAATAAAATGTTTGGAGGGGAGAGTGCGCATCTTAGTCCTCTTAATGGCTACATTGCACAGGCTCACCAACGCTTCAAGAAGTTTTTCTTGGAGGTGTCAACAGTAGAGGAACCTGAGAATCATTTCAATATCGACGAGTACACAGATGTAGTGATGGTCACTAAACCGGTGATTTACATCTCAGTACAGGAGATCTGTGATACTCACACTTTACTGATAGATCACAGACATGAAATAGCACCTGATCCTAATGATCCTCTTCATGAACTGCTGGATGATCTTGGTGATGCACCCAGTGTTGAGGCTCTACTAGGTGACATAGCACCAGTGAATGGAGAAGAAGGACTAACAGCACAATCAGCCAAAACGGAGATTTCTTTAACTCTGACAAACAAGTTTGAGGTACCAGATGATGACGACTCTGACATGAGAGCCTTGTTTGTAAGAACAAAAAGAATGATCGTTGATGTGCTTAAAGTTCAACCTGGTGAAAATCTTACAGAAATCCTTGAGACAACCGCAACTGATGAACAAGAAGAAGAACACACGCGGTTAATGAGGCTAAGAGAACTGAGCGATGAAAACAAGAGTAAGTCCCTCGGCAACGTGACAAGATCAGCCTCCGCTTACGGTGATACCAAGCTTCCTCTTGAAGGACTTAAAAGAAAGATTATTAGAAATCTACGGATGCTTGAAAGCCAAGGGGTTGTTACCATCAAAAATGACTATCAAGACATCATCAATGCTATCGCAAAGGACATCCGCAATCAGAGGAGATACCGTCAAAGGCGGAGACAAGAAAAAAAGAAACTTGGACAAACTTTGGAAAGCTTGCAGAACAAATCGCAGTTCTATGAGGAACAAATCGACTACTATAATCAGTACATTCGCGTGTGCTTAGATAACCTGGCCAAGAAAGGAAAAAAACCTTCAAGAGCCAAACAGCAAAAAGGAGAAGTGTTCCGCGGAGAAATCAAGTACACCGCGCAGAGACTGTACGAGAAGGGAGTTATACTTGAGATCGAAGGACTACCACCAGCGCAGTTTAAAAATGTCATGTTTGAGATCAAATCAGCCGATGAAGTCGGTGTGTTTGTTGTGTCTGCTAAATTCATGGGTGTGGCAATGGAGAAGGTAGAGTTAGTTTTCCAGGACTTGCTCCAGCTTCAATACGAGGGCGTAGCAGTTATGAAAATGTTCGGTCGAGCCAAGATAAACGTGAACTTGCTGATCTTTTTGTTAAACAAGAAATTTTACGGCAAATAG

Transcript

rna-XM_073385829.1

CGCAAGGTGCCTCCCCTTGCTTTcttagtttttcattgtttgaGAGAGATTCTTGATACATGAGGGATGGCAACACAAGTTATCGGCGTGGAGCAAGAAGACGGGCGCTGGAATGAATCGACTGGCGCCTTCAGAGGCGAAGATGGATGGAAGCATGTCTAAAAGAGGAATTGCCAGCTACTACTGAACTCGAAGAGGCATTCAGAAACGGTGTGTTCTTGGCAAAGCTGGGTAATTTCTTTTCTCCAGAGACGATTCCTCTGCGCAAAATATTCGACAAAGATTTTAAAGTTTTGAACTCTCGAGGTCTCCACTTTCGCCACACGGataatattaatttctttataaaTGGTTGCAGTAAAGTTGGTCTTCCAAAgGTTTTCTTTCCTGAGACGACCGACATTTATGATAGAAAGAACATGCCAAAGCTGATTTATTGCATTCATGCTTTAAGTTTGTACCTGTTCAAGTTAGGATTGGCACCACAAATACAGGATCTGTATGGCAAGGCCACATTCACTGAGGAACAGATTAGTGCTATGAGAAAAGAGCTGGAAAAATATGGAATTCAAATGCCAGCATTTAGCAAGATTGGAGGCATTTTAGAAAGTGAGATGCCTGTGGATGAGGCAGCTTTACATGCTGCAGTGATTGCTATAAATGATGCAATCGATCACCAAGATGCTGGCAATACTTTGGAAGCTCTGCGTAATCCTAATGCACACCTCAGAGATGTAAATGCTGAGAATTCAGAACCTTATCAATCTGCTCTGTATCAGGCAAAGAGTACTAAAGCTGCTCAAGCCATAGCTAAGTCTCCAGGCAAGGAGGGAATGGATGTCTATGACACATTATTAACCCAAGCTGAAATACAAGGAAACATCAGTCAAGTTAATGATGTGATCAGAAAACAAAAAGCAGAAGAAGCATTGAATCAAGCTGTGAAAGAAATCAATGGAGCTATCAGTAGCAAAAATGAAGAAGTTCTTTTGCCAGCATTGTGCAACACGGCTGCCAGGCTATCTGGTGTCTCAACTGAAAATGGATCTTGGTATATGAAGATGCTGGGAGAGAAAAAGGAGATAAAAGAACTGCAGGAATCAGGCATCTCAGATCTCACAAAAGCTGAAATCCAGGAAGCAGTGAATGCTGCTAATGACTTAGCAGATCAACACAGGCAAATGGAAGACATAGTTAAGCGCATAAACAAATCTTTAGATGATGGAACTTCAGAAGAAACCCACAACTTGGTTCGAAAACCTGAAGGAATGTTTCCAAAAGTGCTTCCAAGGAGTGCTTTCCTCTACCATGATGGGCTGTTTAAAGGCAAACAAGAATGTGAATCACTGACTCATGAGCTTATCTGTGAGCAGTTAACAGTATTGACAGCTGTAGCTTCCATAAATGAAGCAATTGAAAATGAGAATTCTACTCAGTTAATTAATAGAATGAACCACCCCAATGCTAGCTTGACATCAGTTGAAGACAGTCTGTGTAACAGATATTTGTCTCATTTGGTGTCCGTTAAGGAGGAGAAAGCACAGGACTGTGGAGTAGGCAAAGATGATCTTACTCAGATTGAACTTCAGATTTGTGTGGACTTTGTGAACACTGTAGTCCAAGATGAACATGACTTAATATCAGCAATAGCCGTGATCAATGAAGCCATTGACAAGGGTGATCACAACAGCACATTGCAGTGCCTTCATGCTGAGGCTGCCAAGCTTTCAGGCATCACATCAGAGAATAGCCAACTCTATCAGAAGGTTCTCTACTCTCAAAAGATCGCTAAAGCTCAGAAAACTGATGAAGATTCAGCAGAATTATGGCATGATGAGATTCAGCTTGGCTTGGATTATGCCAATAGGCACGCAGATGAGGCCAGGCAGTTGGCAGAGGGTGTCACTGCAGTAAACCAAGCTGTTGATGCAAATGATGAGAAGTTACTGATGGCAGCCCTGACATACCCTCGTGTCAGCATCTATGGTGTCACCTCACAGTGTAGTCAGCAGTACCTTGAAGAGCTTACAAAACTCAAAGATGCAAAAAAACAACCAGAGACTGATACCAAATGGCTGGAACAGAAGACACCTCAGGGACACATGTATTATTATAATACTGAAAATAATGAAGGCTGCTGGGAAAAACCTGAAGACTTCAGTAATTCATCTCTGTTAACAAGGGAAGAAATTCAGGGGCTGATATCACGAGTCACAGCCCAATATGATCGATGGGTGCATATGCAGTCCAATGAACCTTTGATCATCAAATTACAGTCTCACTGGAAAGGATACTTGGCTAGAAGGGCTTACCATGAAAGAAGAACTTTTTTAAAGGAACATTTACCAGCTGTTATTAAAATCCAGGCATTTGTTAGAGGATTTATTCAAAGACTGAAATACCAAACAAGGCTACAAGAACTGAGGAGTCACCCTGATGAAGTCATTAAGATTCAATCTTGGGTGCGCATGTGGATTGCCAGAAGGAAGTACCTAGAAAGAAGGAAATACTTCAAAGACCATGATTCTGCAATAGTGAAGATTCAAGCATGGGTGAGAGCCAATGTGGCTCAAAATGACTATAGAAAACTTaTTTCTATGCAAGATCCACCATGCAAGACTGTAAGAAAATTCCTTCATCTTTTGGAACACAGTGATGCTGACTTTGAAGAAGAGCTAGACCTTCAGAAGTTAAGAGCTCAAGTTGTAACAGAGATCAGATCAAATCAGCAGTTGGAAAATGACCTGAATCTTATGGACATCAAGATAGGACTTCTTGTTCGGAACAGAATCACTTTACAGGATGTTATACATCATGGAAAGAACTTGAAGCGTGAAAAACAAGACATGAGTACGGCTTTACAAAGAACAAAAGGAATCAAGTCTCTTAGTAAAGAGAGCCATGAAAAGCTAGAAGCTTATCAAAATTTATTCTACCTGCTTCAGACAAACCCAGTTTACCTAGCGAAGCTGATTTTTGCAATGCCGCAGAGTAAATTTACCAAGTTTATGGAGTCTGTTATATTGACATTGTACAATTATGCTTCTAATGCACGGGAAGAGTACCTGCTTGTGAAGTTATTTGATACTGCTCTCAAAGAAGAAATCATTTCAAAGGTGGACCAGATGCAGGACATAGTGACGGGAAATCCGGCAGTCATTAAAATTGTGGTACACTTTAACAGAGGACAGAAGGGTCAGAGTTCACTGCGTGAGCTGCTGCAGCCATTAGTTGAAGGTGTTCTTAATGACAAAAACCTGTCAATAAATACCAACCCCCTTGAAGTGTATAAAGCATGGATAAATCAAATGGAATCAGAGACTGGACAAGCCAGTAAGTTGCCATATGACGTTGAGCCAGAACAAGCCCTCAAACATCCCGAAGTGAGCTCCAGAATAGAGGCTGCTATGAAGAGTCTTACAACTGCAACAGATACCTTCTTGAATTCTATTCTTCAGTCTGGTGATAAAATACCTTATGGTTTAAGGTATGTTGCCATGTCTTTAAGAGTGGCTCTTGCCGAAAAGTTCCCAGAAGCGCCAGAGGCAGAGATATTGAAGGTTGTAGGTAACCTGATCTACTACAGATACATGAATCCTGCTATAGTGGCCCCTGATGCATTTGATGTGGTGTCTTTTGGCGTTGACAAAGGCTTGACACCAGACCAGAGACGAAATCTTGGGTCTATCGCCAAAATCCTTCAGTATGTAGCCTCAAATAAAATGttTGGAGGGGAGAGTGCGCATCTTAGTCCTCTTAATGGCTACATTGCACAGGCTCACCAACGCTTCAAGAAGTTTTTCTTGGAGGTGTCAACAGTAGAGGAACCTGAGAATCATTTCAATATCGACGAGTACACAGATGTAGTGATGGTCACTAAACCGGTGATTTACATCTCAGTACAGGAGATCTGTGATACTCACACTTTACTGATAGATCACAGACATGAAATAGCACCTGATCCTAATGATCCTCTTCATGAACTGCTGGATGATCTTGGTGATGCACCCAGTGTTGAGGCTCTACTAGGTGACATAGCACCAGTGAATGGAGAAGAAGGACTAACAGCACAATCAGCCAAAACGGAGATTTCTTTAACTCTGACAAACAAGTTTGAGGTACCAGATGATGACGACTCTGACATGAGAGCCTTGTTTGTAAGAACAAAAAGAATGATCGTTGATGTGCTTAAAGTTCAACCTGGTGAAAATCTTACAGAAATCCTTGAGACAACCGCAACTGATGAACAAGAAGAAGAACACACGCGGTTAATGAGGCTAAGAGAACTGAGCGATGAAAACAAGAGTAAGTCCCTCGGCAACGTGACAAGATCAGCCTCCGCTTACGGTGATACCAAgCTTCCTCTTGAAGGACTTAAAAGAAAGATTATTAGAAATCTACGGATGCTTGAAAGCCAAGGGGTTGTTACCATCAAAAATGACTATCAAGACATCATCAATGCTATCGCAAAGGACATCCGCAATCAGAGGAGATACCGTCAAAGGCggagacaagaaaaaaagaaacttggacAAACTTTGGAAAGCTTGCAGAACAAATCGCAGTTCTATGAGGAACAAATCGACTACTATAATCAGTACATTCGCGTGTGCTTAGATAACCTGGCCAAGAAAGGAAAAAAACCTTCAAGAGCCAAACAGCAAAAAGGAGAAGTGTTCCGCGGAGAAATCAAGTACACCGCGCAGAGACTGTACGAGAAGGGAGTTATACTTGAGATCGAAGGACTACCACCAGCGCAGTTTAAAAATGTCATGTTTGAGATCAAATCAGCCGATGAAGTCGGTGTGTTTGTTGTGTCTGCTAAATTCATGGGTGTGGCAATGGAGAAGGTAGAGTTAGTTTTCCAGGACTTGCTCCAGCTTCAATACGAGGGCGTAGCAGTTATGAAAATGTTCGGTCGAGCCAAGATAAACGTGAACTTGCTGATCTTTTTgttaaacaagaaattttacggCAAATAGATAACGCAAGGATTACTTCAAGAACATTAACAATACTTACGCTGTGAAAAATTCCAGTACACAATAATTATTGCACTGCAAGCCTGTGCGCGGACGTAAACAACACACGCTCATAGCAGCGTCTAAAGAGGGATACATATTAGCTGTGTATATTATCGGCGATGTCACTATTTTACGGCGATTTGATGCAGTTTTGAGATCTTTTTCAATTAGTCAAAACCCCGACTGTTTTCGAGGTCCTGAGGAAGTACGTAACGCCGTCGTTGGATCAAAATCGCTAGCAGATCGCCGTGAAATCCAATTATCCGTCTTGTTGTTTGCAGTATAATTAAATCGCCGTATCGATAATGGCCTTTACTTAGACTATGTCCTAGTAGTGTTTACAAGTTGGTATTATGGAAGATGTAATTAGTAACGCCTTACATTCGCGGGGTTAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03836 all species →	RasGAP_C	RasGAP C-terminus	Family	Interproscan
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF00616 all species →	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000593 all species →	Domain	RasGAP protein, C-terminal	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR001936 all species →	Domain	Ras GTPase-activating domain	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR023152 all species →	Conserved_site	Ras GTPase-activating protein, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14149 all species →	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:1903479 all species →	Biological Process	mitotic actomyosin contractile ring assembly actin filament organization	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073241930.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.