Gene detail

Detailed information of XP_073242097.1 in Porites lutea

Genomic Location: chr5:5970015...5986267
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLUTE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140936512

ATGACCTCTACACCGGAGAGTTCGTCAGTCCCGAGTCAGGGAGATCTGTTCTCCTTACTCGATGCGGACAACAAACATACTGTGGAAGAAACCAAGGCGCTGATTCACGAAAATCTTCATTCGTCTCGTGATCCAGGACTTTTGAACTCCATGGTGGAGTTCTATTTAAAGACTCGCTCGCAAGCCTGTCTGCAGATACTGAGTGGAATTCACGAAGCTCGTGCGCAGGCGTTGTTTGAGATAATGAACGAGTGTCTTAAGCAAAAACACACTCGCTTGGACACGTTAACCCTATTGGGTCATATCGTGCGGAAACAGGCTGACAATGATGTAGTGGTTTTAACAAGTGGCATTTTAACGATAACTACCCTCTTACCGCTGGTACCAGCCTCAATTGGACACTGCTTGCAAGACTTGTTTGACATTTTTACCAGGCTCTCGTCATTCAGAGCTCGTCGACAAGGTAATGCACCTGAAGTGTACCTTCTCTACCTGCATGTTGCTGTTTATATGTTTTTTCACCGATTGTATGCCATGTACCCAAACAACTTCTTGGCATATGTCAGGGCACTGTGCAATGAGCCATCTAAACGGAATATCTTTCAGAACACTATCAAGCCGATGCTGGAACATGTACGACTTCATCCCTGTGTGATAACAGAGACAGCACATACAGAAACAGAAAAACACAGGTGGAGACAGAAAGAGCCCCATGATATTGTTATAGAGTGCATGAAAGTCTCGTTGGATCCAATCGACAGGATACAGGAGAAAGGAACATTTTTGTTGTCATCATCATCCAGACATAGTCTTCAGGAACTTTTAGCTGATAAATCCAGCAGCTCTAATTTCACAGCATCGAGTGAAAGTCAAGGACAGGAAACTGTGAGATCACGGGAGCGTCGCATGTCAGACTCGGCAACGCAGACTGGCAAATCACTACAGAGTGGTGACAGTGGAATAGACTCTTGTAATACTCCAGTTATTTTGTCAGATAAAATTATGACGGGGTGGAGCCCATCAGAAGTGTGTCAGCTTAGTACCCCACCTTCATCACAAATGTCTCCATCAACCAGCAACCCTGACCTGTGGAGCTCAGTGAATATTCACTCTCATTGCAGTACGCCAGGAGCCACAGTTACTCCAGAGCAATCACCGACATCATCAATGAGTGGGGACATAGGCCATCAGCATGGATGCTCAAGTTCACCTTCCATGTTTGGAAGTAAAGGAAGAGCTGGTGTTTCAGCAGGGATGTCTAGTGGCAGGGGGACTCCAGTTAGGGGTGCTAAAGCCTCTAGTCAGGAGGGACAGTTAACAAACGCTTTGTCTTCTGCTTTAGCACAGCACAGTCATGAATCAGCTGCTGAAGCTCTTGATGAGCACCAAACCTCAACCCCAAAAGATGTGGCAAAGAGAGAGGAAGGGAAAAGAATTGAAACTTCAGTGGAGGAAGTGCCCCATGGTACATTTACTATTTCCTCCTCTACAAGTGTTTCAAGTACTCTTGAAGGCCATAATAAAGAAATAAAGGACCACCATGAGATACCTAATGCAGGGCATTTGGACAGTAGTAAAATCTCACCAAAAGAGGAGTACAGGGACTTAAGTGGGCATGAGGTTTTTGCCTTGGAATTAAGTGAACACAAGGCCCTTGAATCGAATCAGGGTAACATCACTACTGATTGGTTGCCGGATTCTTTCACACCAGTTTTGACTCCAGTGGCTGGGCAATCTCTGGACACTGTGACGTTAAAGAACTCACCCCATGTAAAAGATGCCTCTTTGTCAACAGAACCAGAGGAATCTCAACATTCTGCACTGCAATCTGGATTTGATGCTGATGGACTGTTGCATAGCAAACACCATCAGGATTGTGATGCCAGTACTAAAGGGCATGAAAGCATAGAAGCTAGTAAGAGTGAAACAAGCTTAGCATCTGATGAAATATCCTTAGACTCATCAAAATTCCATAGCACTGTTCCTCATGATGCAACACAAAATCACCACCAGTCGTTAGCAGACTTGATCCCCTCATTTCCTCAGCTGTTGCCATTGTTTAGAGGTGAACAGAAATGTGCTGTGGGTAGTTGCATGACTCATGAAGATGACGCAGGTTTATCTAGACCTCAGCAGCATTTGTTGTCAAGTGCACCAAGCCCTGTGGAAATCCTTGATAGCTACCTCAAAACAGGAAGCAGTTTGCACTATGGCGAGCTCTCCAGGGTGCCTCTTGTTAGTCACGCTAATACTGCTTGGACACATTATGGAGGTGAGCCTCCAGTAGATGAAGTGGAGATCATGCGAGGGCAAGTCAAGCTACTTCATAACCAGCTACTGTTTGAGCGACACAAATGTGACTTGCATGCTATTCGTAACAGACGGCTCATCGGCAAGACATTCAAGGCTGTACAACATCAAGAAGAACTGCTAGCGACTAAAGATCAACTCAGGCTTCAAGAGGATAAAATGAGAGAACTGACTGATGCCCTTAATAAACAAGTAGAAGAAAACAGAAGATTTAAATCTATTGCATCAAGCTGGGAAAGTCATCAAAGGACAGAACTCAGGAATTTGTTGAATGAGAATGCTCAACTGAAGTATAAAGAAAAGGAGCTACTAGAGAAACTTGAAGCCCAGCAAAAAGGATTTGATACCAAGCAAACCGAAATTCATCAGTTGAAGGCAAGAATTTTCACTTTGGAAAATGAGCTAGATAGACTGAAAGTTCAAGCATTAGAAAAAGAACAGCTGTCAAAACAGGTCAATCAACTTGTGATGGAACTTTTAATAATGGGTGAGCTTAACCAGCAACAAAAAGACACTATTCAGGAATTAACCCTTGCTGAGGGACAGAATCCTGAAAGCAGTATGCATATACATGGCTGTCACAGAGAATTAGGGGTTGCAAAGCAAACACTGAAAAAGCAGAAAGCTGAACTAGATGCATTAACCTCCAAACTAGCAGAAATGGAAACACAAATCTCCAACAAGGATATTGAAATAAGAGAAATGAAAAAGTTCACTGAGGGATTAAAAGGAACATATGCTGGGAAGATACAGAGTCTGGAAGAAAAATATGCTGCCCAAAGGAAGGTAACGCAAGCCTTGGAATCTTACATTCTTGACCTGCAAGCTGTGGATAGTGCAAGAAGAGAGAAGATTGAGAGGGAAACAATGCAACCTGACTCTTAG

Transcript

rna-XM_073385996.1

atggcggcgGACAAGTACTTTGAGGGAATACGTGCAGAAAGTCTTTGCTTTTTTTGGCGATAAATGAAGGCAACCAAGATGTTGCCGCGTCTTACAATACCTCAGGCTTATTTCTTTTCTATACGACTCTCGCATAACTTTCGAAGAGCGCTTTAACAGACGGCGATGACCTCTACACCGGAGAGTTCGTCAGTCCCGAGTCAGGGAGATCTGTTCTCCTTACTCGATGCGGACAACAAACATACTGTGGAAGAAACCAAGGCGCTGATTCACGAAAATCTTCATTCGTCTCGTGATCCAGGACTTTTGAACTCCATGGTGGAGTTCTATTTAAAGACTCGCTCGCAAGCCTGTCTGCAGATACTGAGTGGAATTCACGAAGCTCGTGCGCAGGCGTTGTTTGAGATAATGAACGAGTGTCTTAAGCAAAAACACACTCGCTTGGACACGTTAACCCTATTGGGTCATATCGTGCGGAAACAGGCTGACAATGATGTAGTGGTTTTAACAAGTGGCATTTTAACGATAACTACCCTCTTACCGCTGGTACCAGCCTCAATTGGACACTGCTTGCAAGACTTGTTTGACATTTTTACCAGGCTCTCGTCATTCAGAGCTCGTCGACAAGgTAATGCACCTGAAGTGTACCTTCTCTACCTGCATGTTGCTGTTTATATGTTTTTTCACCGATTGTATGCCATGTACCCAAACAACTTCTTGGCATATGTCAGGGCACTGTGCAATGAGCCATCTAAACGGAATATCTTTCAGAACACTATCAAGCCGATGCTGGAACATGTACGACTTCATCCCTGTGTGATAACAGAGACAGCACAtacagaaacagaaaaacacagGTGGAGACAGAAAGAGCCCCATGATATTGTTATAGAGTGCATGAAAGTCTCGTTGGATCCAATCGACAGGATACAGGAGAAAGGAACATTTTTGTTGTCATCATCATCCAGACATAGTCTTCAGGAACTTTTAGCTGATAAATCCAGCAGCTCTAATTTCACAGCATCGAGTGAAAGTCAAGGACAGGAAACTGTGAGATCACGGGAGCGTCGCATGTCAGACTCGGCAACGCAGACTGGCAAATCACTACAGAGTGGTGACAGTGGAATAGACTCTTGTAATACTCCAGTTATTTTGTCAGATAAAATTATGACGGGGTGGAGCCCATCAGAAGTGTGTCAGCTTAGTACCCCACCTTCATCACAAATGTCTCCATCAACCAGCAACCCTGACCTGTGGAGCTCAGTGAATATTCACTCTCATTGCAGTACGCCAGGAGCCACAGTTACTCCAGAGCAATCACCGACATCATCAATGAGTGGGGACATAGGCCATCAGCATGGATGCTCAAGTTCACCTTCCATGTTTGGAAGTAAAGGAAGAGCTGGTGTTTCAGCAGGGATGTCTAGTGGCAGGGGGACTCCAGTTAGGGGTGCTAAAGCCTCTAGTCAGGAGGGACAGTTAACAAACGCTTTGTCTTCTGCTTTAGCACAGCACAGTCATGAATCAGCTGCTGAAGCTCTTGATGAGCACCAAACCTCAACCCCAAAAGATGTGGCAAAGAGAGAGGAAGGGAAAAGAATTGAAACTTCAGTGGAGGAAGTGCCCCATGGTACATTTACTATTTCCTCCTCTACAAGTGTTTCAAGTACTCTTGAAGGccataataaagaaataaaggaCCACCATGAGATACCTAATGCAGGGCATTTGGACAGTAGTAAAATCTCACCAAAAGAGGAGTACAGGGACTTAAGTGGGCATGAGGTTTTTGCCTTGGAATTAAGTGAACACAAGGCCCTTGAATCGAATCAGGGTAACATCACTACTGATTGGTTGCCGGATTCTTTCACACCAGTTTTGACTCCAGTGGCTGGGCAATCTCTGGACACTGTGACGTTAAAGAACTCACCCCATGTAAAAGATGCCTCTTTGTCAACAGAACCAGAGGAATCTCAACATTCTGCACTGCAATCTGGATTTGATGCTGATGGACTGTTGCATAGCAAACACCATCAGGATTGTGATGCCAGTACTAAAGGGCATGAAAGCATAGAAGCTAGTAAGAGTGAAACAAGCTTAGCATCTGATGAAATATCCTTAGACTCATCAAAATTCCATAGCACTGTTCCTCATGATGCAACACAAAATCACCACCAGTCGTTAGCAGACTTGATCCCCTCATTTCCTCAGCTGTTGCCATTGTTTAGAGGTGAACAGAAATGTGCTGTGGGTAGTTGCATGACTCATGAAGATGACGCAGGTTTATCTAGACCTCAGCAGCATTTGTTGTCAAGTGCACCAAGCCCTGTGGAAATCCTTGATAGCTACCTCAAAACAGGAAGCAGTTTGCACTATGGCGAGCTCTCCAGGGTGCCTCTTGTTAGTCACGCTAATACTGCTTGGACACATTATGGAGGTGAGCCTCCAGTAGATGAAGTGGAGATCATGCGAGGGCAAGTCAAGCtacttcataaccagctactgtttgAGCGACACAAATGTGACTTGCATGCTATTCGTAACAGACGGCTCATCGGCAAGACATTCAAGGCTGTACAACATCAAGAAGAACTGCTAGCGACTAAAGATCAACTCAGGCTTCAAGAGGATAAAATGAGAGAACTGACTGATGCCCTTAATAAACAAGTAGAAGAAAACAGAAGATTTAAATCTATTGCATCAAGCTGGGAAAGTCATCAAAGGACAGAACTCAGGAATTTGTTGAATGAGAATGCTCAACTGAAGTATAAAGAAAAGGAGCTACTAGAGAAACTTGAAGCCCAGCAAAAAGGATTTGATACCAAGCAAACCgaaATTCATCAGTTGAAGGCAAGAATTTTCACTTTGGAAAATGAGCTAGATAGACTGAAAGTTCAAGCATTAGAAAAagaacagctgtcaaaacagGTCAATCAACTTGTGATGGAACTTTTAATAATGGGTGAGCTTAACCAGCAACAAAAAGACACTATTCAGGAATTAACCCTTGCTGAGGGACAGAATCCTGAAAGCAGTATGCATATACATGGCTGTCACAGAGAATTAGGGGTTGCAAAGCAAACACTGAAAAAGCAGAAAGCTGAACTAGATGCATTAACCTCCAAACTAGCAGAAATGGAAACACAAATCTCCAACAAGGATATTGAAATAAGAGAAATGAAAAAGTTCACTGAGGGATTAAAAGGAACATATGCTGGGAAGATACAGAGTCTGGAAGAAAAATATGCTGCCCAAAGGAAGGTAACGCAAGCCTTGGAATCTTACATTCTTGACCTGCAAGCTGTGGATAGTGCAAGAAGAGAGAAGATTGAGAGGGAAACAATGCAACCTGACTCTTAGTAGTTAATAAAATCTAGCTTATTtaaaacaatgataataataataattataatagtaataactataattattaataattattattttactgtAATCTATATTGTGTAAAGATTCCTTAATATTTTCCTGCTCCAAAGTCTACTAGAAGCCCATTGTTTGTAAATTAAATTGTAATGAGTTCAGAGTTGGTCTTTCATCAGAATAGAATAGCGAATTATGATGCCAGAATGGCTACGTTGgtgaaaacatcacttaacaAGAGACTTCACATTCTTTGAAACTTTAGCATGATTGTCGCAACTCACTAACTTTGTTAAATGTAGGTGAACTTTCCTGGAGCTGAATTCCTAAGAAaaatatccaagttcataaagcaAGAGAGAAATGTCATCATTTGTTTAGTCACGTTCTCCATGAAATGTGAAGTTAAACAGTTTCATGTCATAGCTGTGTAGTGACAGCAAAGGAATGTAAGAAAAATGTGCTGCAcattcaaagttgttgttttgctaacctAAACTTATTACTTTTTGATGTTCTCACTGCCATTACCATTGTGACATCTTAAAGTCCTTAATGTGGGTAAGACCCGGCTGCTGTTGTATTTCACTGGCTGGATGACAGCTTGTAAATGACTGGCTCAGCTGTcagaaaacaaaactcttgGTTTGATAGTCACCCTAGCTAACACACTACAGACACTataattttaactctttttaacTTGTGACTGTATTACTTTATgtattgaatttttttccgtCTGGAGGCTTTCTAATCTAAAATGAATTCATTTTAACTAACAAAATTGTAATAGTTGTAATTTGCACCAAAATGCACAGAAAcactgaaattttgttttcttttgaaaactggcgtagataaattattattttatcacaGTTAATTTTACTTCATATAAAATCTTAGCTTTCCAGTGATAATGAAGGAGCAAGTTGCATTTCAACAATAGTTTTTGGGGGGCTCTTGTCTGGTTTACTGTTGACCCTAGATTATAAAGTGTTTATGTAAATTTGTCAGTTTGAAGATTATTTCAGTTTTGAGGTGTTTATTTAAAGTTGCATTTTTAGGTCACTGGATTAATTGATTGTGCCATAAATCTGTAAAAATGCACCAAGAGTTCCACAGAGGCATAATATTCATGAGGTTGGAAAAGCCATCCTTTGTTGCTAAAAAAGTTTGAGCAAgcttaaattatgtttcattaattttgttagAGTTAGTTGACATGCAGCTATGTCAAAATGTTAGGTGGAGACAAGTTATCTACAAATGGAACTCAGGTTTTTTGAAAGGAAATAATGCTGCTTTCACTGTGGTGTCATACAGCATGCAAATAAAGACGTGGCTAAGTTATTTAggatatatatataaattatatattttctaTATAGTgcttaataaaataattaatattattattacttattattattatgtctacatttattatcataattactaTCATTAACTTGATATATCTGACAATCTAAGTTCTCAAACATAATAAATGATTTAGTGTTATTAATTGGTTGGCCTTCTGCTCAAACAATACTTTTTTATcagacagtcagtcagtcagtcagacgCTAGCAAAATGGAGTGGTTGTGGTATACTTTCATTTGAATCTGAAAGGAAATCATTTCCATACAGGTTTAGTAGctttgatttcaaaatggaattAAAAAACAGAGTTGTTGATCACGTATAGCCTTTTCTCAGTCATGGTTATTATGAATGACTGCAGCAGgaacaaaaattaaagaatcAGGAGCTATATCACGGGAGAATATTAAGAAATATAAGAGTGATGGCAAGGAAAACATCACTGAAAAAGTAAATTTCTGTTCTTTCAAGGTTGTTCgttaagagaaagaaaaattttcattaaagTGTGTCTATTTATGAGAAATCTTCACCTTGTACatgtgcagtgacggcaaagaaatgtagcaAAAAGTGCGATGAATCCATGCAGAGTTGTTGTGCTCATTCAGAAACTataatattgcttttttgatcTTGTTGCCATTGCTATCGTTGTCTGAGCTTCTATAGTTCCCTTTTTTATGTTGGCTTATTTCTGTACACTGTCTGGCCATGGTTATTTGTATTTATCATAAGGGTGGAATAAGGAAGACAGTGGTGATATTTCCAAAAATCATACTTGTAAAAAACAATATTCTAAGGTACGTTGTTTCTAAGGGGGAACCACGATTGTAACTTGAAACTGTACTGATGAATGGGAAATACCTTTGTATGTGATAGATAAAGAACTGGGAAGGAATTTACTGGTAGGACAAAATTAGACCAGTAGTTGCTTGCCATgcagtattttattttattgttcactGCACAgcattaactttaaaaataaataaaccataTGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04388 all species →	Hamartin	Hamartin protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007483 all species →	Family	Hamartin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15154 all species →	HAMARTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008285 all species →	Biological Process	negative regulation of cell population proliferation	Interproscan
GO:0032007 all species →	Biological Process	negative regulation of TOR signaling	Interproscan
GO:0033596 all species →	Cellular Component	TSC1-TSC2 complex	Interproscan
GO:0051726 all species →	Biological Process	regulation of cell cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07206	TSC1; tuberous sclerosis 1	-	Human papillomavirus infection	ko05165	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.