Gene detail

Detailed information of XP_073242433.1 in Porites lutea

Genomic Location: chr5:24002566...24015827
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073386332.1

GGCTCGGTTACCAGGACAAGGGAGAGAGAAGGAAACTGAAAGTTCTATGGCAGCAAGGAACTCCTATTTTATATGAATAATAAAGTACTTTTGATTTTGATTGCCACATTTCAGACTTCCTGTATCAGAGGCTTGGAGGACTCGTGTGATGCAAACAGTGAAAAAGACTGTCAAATGTCAGAATCAACGGAGCCCTCGGAAAACAACGACGGCATGGGGCAATATTTTTGTTCAAGCAAGAAGGAAACTTCTTTTCCAGAAACATTAGAGGGGTTTGGGTATGAGTTCAACGCAGAAGGAGAGATGCGGAACTTAAAAACTGGCGAGCCATTCAAATTTGAAGTCAAAGAAGGTGACAGAGCCTATAATCAAAAACATTATGAAGCACTTGGAGAGGTGATTACTGAGTATGTTTACAAATTACTAGAGGAAGAGGTCAAGCTAAAGAAGCATTTTGTTCCTGTTGATGCAGAGGAAAATGAAGACAAGAGTTTCTTCTTCATGAGTGATGATGCTTTGACATGTGACAAGTTGATGATTCTTATTCATGGGAGTGGCGTTGTGAGGGCAGGACAGTGGGCCAGAAGGTTAATTATCAACGACAATTTGAGTTGTGGAACAATGTTGCCGTACATCAAGAGAGCTAGTGAGGAGGGATATGGAGTGCTTATCacaaatggaaatgaaaattatgtgcggaaaaacaagaaaagaattaCCATTAGAggCAGTGAATCTCCTGAAAGGCACTTTGTCTATGTTTGTGAgcactttatttcaaaagcaGCAGCCCAAAAAATAGTTGTGGTGGCTCATAGTTATGGAGGAGTTGTCATTGTTGAAGGACTGCAACAATGTAAAGAACTACAAGAAAAGGTGAAAGCTGTTGCATTTACAGATTCTGTGCACAGTCTGGTACACCAGAAGGCAAGCAAGAAGTTTATCAAGTGGATGAGAAAGAATTCTCGTAACTGGGTGTCTTCTGATCGTCCTTTGGACACTCCTATTCAGTCCTTGTATAAAGGAGCAGATTGTGATTTGGTGTCAGCTGGCACAATAAGGCATGAGCTCACTTCACATTTTGCATTTGATTCGGTCTTCAAGTTCTTTGATGAGAAGATAAATTCAGCCCCAAATACTGGGTCAGATGTCTCAGAAGATAGTGAACAAGAGGCAGATGCCAGCTCACAGAATAATATGGACTCTGATGAAGTTCCAGAAAAAACTTCTACTAACAACATGGATGCTTCTGTAGATCATCCTGATGAAAAACCATCAGAAAACAAGAAGGATTCTGGTGCAGATGACGTAGATGCCAACTCCCAGACCAAGGAGGACAACCCTCAGAGTCAACCTGATGACTCTCAAATGGAGACTGACATCTAAGCAATAAACAATAGTTGATTTCTCACGAAAATAGTGTATAAAGTTAACTTATTATTTCACAGACAGGGCAGCTCTCCTGGCCAGATTGTTTCAGGGAACATCAGGGCACGGTACAAACTGTAAACTGAGAAACAGAAAGGTGAAGGATAGGATCCATTTGGGTGGGGGCATGTTGGAGGCTGCTGGGCATTTGAAATCTGTGATCAAGGGCCTACTAACAGCTTTTCCCCCAGAAGTTTAAGATAAAAATCTTTCCCAGTAGAAACCCCTTTTCATCTGCCACGACCCTCCAGGCATTTAGCAATAAATTTATTAGAGGCAACTAAGGTAAAGATCGAAGTAACAAATAATATGCACTCAACATGCATGTAAAATGGTATTGCTGAATGTTATACATGTACACTACTATTTCTCTATTTCTAATAATCTCTAGTTGAAGAGTTCACACGAAAACGTCCACTATTGTGGGCTTATGTCCCCTCGTATTTGGAggggacatttttttttattgggggCGTGAGATTTTGTCTCAAAACATGTAAGACCAAAAAACATAGTAAATCAGTTAGTCATTAAGTGACGTTTTACCTAAGAGTAGATTTTCTTAAAAGCTGTATTAACAGACTGTTTTTCAAAGGATGATTATATACTGGTACTCAgttcaaaatagaaaaatgcaaataaaattatttattattatgtcA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003259 (this species only) · gene tree & orthology

Pfam domain

No Pfam domain signature was recorded for XP_073242433.1 in Porites lutea.

InterPro

InterPro term	Type	Description	Source
IPR048263 all species →	Family	Arb2	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21357 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031048 all species →	Biological Process	regulatory ncRNA-mediated heterochromatin formation	Interproscan
GO:0035197 all species →	Molecular Function	siRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073242433.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.