Gene detail

Detailed information of XP_073243445.1 in Porites lutea

Genomic Location: chr5:34425242...34440317
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073387344.1

TGCTTGTCATTTCGCTACAAGGAAGATACGTGTTCAGTTCAGGTAATTGTGCCAGTTTATCACTGTATGAGGGTTTTGATTAGAACTGGTGACATCAGCGAAGACGAAATTGCATGAGGACTTGAGGGGTTAGTTACTTAAACAAAGTAGCCGAGTTCAATCACGATTGTTGTGAAGATGTTGAGAATAACTACGCTGCAAACTTTCCTAAAGCCATGGATCCTGTCGCCCCTTCACAGACGACTGGAATCCCAATACCTAAAACCAGAGAGAGTTTCAACTTTCCCAGAGCTGGGAAAAAAGTTCAACATCCTGTTTTTCTCAAACAAACATAACAGCCTCAGTCAAAGAATGGCACTGGAATTAACAAAGAGACAACATAACATTCAAGTGAATGAAATCAACGAACCATCAGAGATGATCCATCTTGCGGAGCATGTCCAACCTGATCTAATTCTTTGTCCGTTCCTCACCAAACGAATCCCAGAGCAAGTGTATTCTAACACAAGAATTCCTTGCTGGATTGTTCATCCTGGAATCGAGGGTGACCGTGGTGCAAGCTCGATCGACTGGGCACTATATGACAGGGAAGACGAATGGGGAGTGACTGTATTACAAGCTGCCGAGGAAATGGACGCAGGAGACATTTGGAGCACTAAAAACTTTCAAATCAGGCGACGAAATATCAACACACTGACCAAGTCGAGCTTGTATGTCAACGAAGTCACTCAAGCAGCGGTTGAAGCTGTACTTGAGGCAATTGAGAATCTATCAGAGGGAACATCACCACGACCTCTTGATAACAGTAATCCACACGTGCGAGGCACCCTTCGCTCAAACATGACCAAAGTTGACCGCTCTATCAACTGGGACATGCCAGCAGATGAGATAGCTTGTCAGATACGTATGTCTGATTCATCACCAGGAGCTCACGCCTGTTTTCGCACCAGCCGAGGCGCAGAGGACAACGAATGGACCAAGGCGTTTCGTGTCTTTGGAGCGCACTTGGAGAAAGGAAAACTCCGATTTCTGCCTGGAAAACCTGGAGAGATACTGGGTCAACGTCATGGATCTCTTCTTGTGAAGTGTGGTAGGGGAGCTGTTTGGGTGTCACATCTCAAGAGAGACAAACTAAAACTTCCTGCAAACATGTGGCTACGAACAGGCGCACCAACTATTAAAGATGTGTCAAATCTACCCATTCGGTATGGCTCGCATCCTAACACTTTCCAGGATGTTTGGACAAGCATGACCCCAGACGGCGTCTGCTTCGTGCACTTCGACTTTTATAACGGGGCTATGAGCACCAATCAGTGTAAACGCTTGATTTCTGTTCTTCGACAGGTGGAAGAGAATGATTTCTGCAAGGTAATGGTGCTCATGGGTGGCAATGATGTATTCAGTAATGGCATCCACTTGAATGTTATCGAGGCAGCCGAAGACCCAGCCCAAGAATCGTGGAACAACATCAATGCCATTAACGATGTGGTGCGCTGCATCTTCACCAGTAAAAAGATCACGATCTCTGCGCTTCGTGGAAATGCAGGCGCCGGCGGAGTGATGATGGCCTTAGCGAGCGACTTTGCATTTGCTCGGGAGGCAGCTGTGTTGAACCCACATTACAAGAAGATGAAGCTTTACGGTTCAGAGTATCACACTTACTTCCTTCCAAAGCGCGTGGGACAAGATAAAGCGAACGAGCTCCTGTCCAATGCCGAACCCATCCTGGCCTGTGAAGCTGCAGAAATTGGCCTCTTAGATGGCTGCTTGGGGGATAATGCAGAGGAGTTTGAAAGCTGGGTGAAGCATCAAGCATCGTTTCTTGCGCGGTCGCCTTTGCAGATGCACTTTGTTcgaaaaaagaacagaaaagtTAGCAAAGAAGTGATGGAGACTGTTGAAACTTGCCGAGCAAATGAACTTTCAATGATGGCTCGAAACTTTCAAGATCCAGAGTATCACCAAGCGAGGAAGAACTTTGTTTATCATTAAAGTATCATTTATTTAGTTCAATGATCATACCTCGGCATTCAATCAATCTGAACTTAAAAAGTTGAATTGACTCATGATATGATAAGGTGAGGAGTTCAGCGTTAGTTACAGAAACTCTAATGTCACCCCCACAGTTTATAGAAACCGAGCTAGACCGATTTGGTTAAGGCACTTTGTCATTTCAAATAGTTTCAGTTGTCAGTATGAAAAAACCTCTTTAGGATAAGGACATTACTCAGTTGCAGTCTATTCTCgccttaaaaaaatttccaggtGTGGCCatttgaaatttgtctcatttaaaatgttatgcagtgtttgaatgaataacGGTGGAAAGGGAATTTTCATACAGTATATTCACCCTTAAAATATGAACAGTGGCCGATGACATGTATTGTAGCATTAGCAATCTAACTTTCCAGTGGTTGACCTACCTTTATTATGTTACTTTTGAAATTTAAGCGCTTGTTAGACCATGTTAGTTAGTATTTTAATAACTTAGACTCCACCATTGTAACTtttgatatgtatttttattaaatgaataaagacattaatattaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00378 all species →	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF02911 all species →	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029045 all species →	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR001753 all species →	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR005793 all species →	Domain	Formyl transferase, C-terminal	Interproscan
IPR011034 all species →	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan
IPR047180 all species →	Family	Hydrogenase maturation factor HoxX-like	Interproscan
IPR018376 all species →	Conserved_site	Enoyl-CoA hydratase/isomerase, conserved site	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43388 all species →	HYDROGENASE MATURATION FACTOR HOXX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073243445.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.