Gene detail

Detailed information of XP_073244012.1 in Porites lutea

Genomic Location: chr5:44416549...44430206
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140938432

ATGTATAAGATTCTGCTAGACTTACACATTTTTCCCATGCTGAACATATACCGTACCGACCCGTATCTTGGTCCGCTACAAAGAAGGTCCATGATCAGTAACAATCTGTCGTTTATTCCTTCTGATGCTTTTGCTGAACTTAGAGACCTGGAATCATTGTTTCTTCACGGTAATTCCATCAAACGCATTGATCACACCGCATTTCATGGGCTTAAGAAGCTTGATTATCTGACTCTTTTTGATAATTCACTATCATATATACCAGATGGTGTTTTTAAGGAATTGAAATCTGGAACTAAAGTGTCTATAACTTGTAGTAACTTATATCAGCTTCCTGCCGGAAATAGTTACAGTTCAGTGATTGATTGCGCCCCTTCGACTACCTTTCACCTCCTGCGTCTAGACGAGGAAGTCTTCTACGTAGCGGGCCTTAGGCGCTCTGGCTTTGTGTGCCACAAATGTAGACTGACCTTGTTATGGAGATGTTATAACTGCAGTCTTTGTCCGATTGGTTACTATGCCAGCGATAAGTCCACAAACACATACATGTATGGTTCTTGTCAACCTTGTCCTGCAGGAGGTTTCTACCAGGACCAAATGGGGCAGATTAACTGCAAGCAATGTAGTTTAGGTACCTATGTCTCTACAGAGCGACATCCCGGTCAAAGACCAACTGACTGCTCGGCGTGTCCATATGGGACGCTCTCAAACGAACATGCTGGTTATCGTGCATGCAAATGCCTGCGTGGATTTTACCGTTTGGATCGCTTTGGTCCATGCTCCGATTGTCCAGCTCACGGCATCAGCTGTGTCAACGACACTGCAATACTTGCACCTAATTATTTCTGGAAATGGACCAATCAAAGTAATAAAGAGTTATATAAAGACTTTATAAGCAACATCCATAGTTTTGGTCCTGACTACAACGATTCGTACTCTAAATTTACTGCTTCACTACCCAAACCAGTAAAATGTCCTTTTGCTGGGTCCTGCAAGGGAGGAATAGATTCAGAGTGTGAAGAAGGATACCAAGGAAACTTGTGTGCTACGTGTTCTCATGGCTACTACCTACGATTTAATTTCTGTTTGAAATGTCCTGGATTCTTGGTTTCCATAATTTCATCATTGGTGGTTATTGGAGTCTTTATTTTGATCTTTGCAACGGTTCCGTGGGGGGACTCCAAAAAGACAGAAAATAATCGTACAGTTGCAGATATCATCATGTCCTGCTTCAAAATTGTCATTGGGTTTTACCAGGTTATTGCCGGTGTTTTCTCGGCACTGACCAGAGTTCATTGGCCAGTTACTCTGATCGCAATGGATAAGTTTCTGAAATTGTTTGATGGCAATATTTTTCAATTTGCGCCATGGAGTTGCGTCTATTCTCAACTTCGACTTAACCCGTTCTTAAAATTCATCTTGGTTCTTTCTGTTACCTTTGTTGTCGTTTCTTTTGCCTTTGTTTACATGTTCCTTCAATTGCTGTACATCAAAGGCAATAAGGATCGTCCAGAGAGCGAAAAGCTACGTGCTCTATCTAGGTTGAAGAGGTCCTGCTATCGGAACATTTTCCTGTTTCTGCTGGCATCATATCCCATGACAAGTAAAACAATTATCCAAATTCTTCCTCTTCAGGGCGCATGCGTCAAACATTGCTTTTCAGATGAAGGAAGCCAGTGTATCTCTCTCATGAAGGCTGATTACTCCATCCAATGCTTTACTCCCCAGCACAAGACGTATTGGCCATTTGCTGCCGTGTTTTCCGTATACCCTGTGGGATTTCCTCTGATGGTACTGCTGCTTATTTATAAATACCGACAATCAGAGCGGTATGAGGAACTTTCTTTTGGACTGAAAGTCTTCTTTGAGAACTACAAGGATAAATTTTGGTTCTGGGAAATAACAGAGATGTACCGAAAGTTGATACTTATTTCACTAATTTTCCTTTTTGGTTCAGGGGTAGTATCCCAGATTGGTCTGACTCTCCTGGTCGTGAGTGTCTTTGGTGTGGCCTACACATTCTTCCGCCCGATCAAAGGCAAATTTGAAGATCTCCTGCAAACCTTTGTTCTGTGGGTTATCTTCTTTGACGTTTGCCTCGGGGCAATGTACAGCACCTCTGACGTCACCAAAGATAATGACTCCTTGATCGTGAACATCCTGTTCGTCGTCCTCAACAGCTCTGTGCTGCTGGTTGCTTTAGGTAAAGGGATCGCGCACTTATCGTTTGTATACAAAAAGGTGTCATCGTGTGTCCTACATTGCATCAAAATGATTCATCGTGGATTGGCTTATATCAAGAGAAAGATTGTTAGCTGTTTCCAGACGGTCTTTGGCCAAAGATCAGAGCCATTTGATGTACAAAGGCATCTTCTGATCCAAGAGTTCACTTGA

Transcript

rna-XM_073387911.1

ATGTATAAGATTCTGCTAGACTTACACATTTTTCCCATGCTGAACATATACCGTACCGAcccgtatcttggtccgctacAAAGAAGGTCCATGATCAGTAACAATCTGTCGTTTATTCCTTCTGATGCTTTTGCTGAACTTAGAGACCTGGAATCATTGTTTCTTCACGGTAATTCCATCAAACGCATTGATCACACCGCATTTCATGGGCTTAAGAAGCTTGATTATCTGACTCTTTTTGATAATTCACTATCATATATACCAGATGGTGTTTTTAAGGAATTGAAATCTGGAACTAAAGTGTCTATAACTTGTAGTAACTTATATCAGCTTCCTGCCGGAAATAGTTACAGTTCAGTGATTGATTGCGCCCCTTCGACTACCTTTCACCTCCTGCGTCTAGACGAGGAAGTCTTCTACGTAGCGGGCCTTAGGCGCTCTGGCTTTGTGTGCCACAAATGTAGACTGACCTTGTTATGGAGATGTTATAACTGCAGTCTTTGTCCGATTGGTTACTATGCCAGCGATAAGTCCACaaacacatacatgtatggTTCTTGTCAACCTTGTCCTGCAGGAGGTTTCTACCAGGACCAAATGGGGCAGATTAACTGCAAGCAATGTAGTTTAGGTACCTATGTCTCTACAGAGCGACATCCCGGTCAAAGACCAACTGACTGCTCGGCGTGTCCATATGGGACGCTCTCAAACGAACATGCTGGTTATCGTGCATGCAAATGCCTGCGTGGATTTTACCGTTTGGATCGCTTTGGTCCATGCTCCGATTGTCCAGCTCACGGCATCAGCTGTGTCAACGACACTGCAATACTTGCACCTAATTATTTCTGGAAATGGACCAATCAAAGTAATAAAGAGTTATATAAAGACTTTATAAGCAACATCCATAGTTTTGGTCCTGACTACAACGATTCGTACTCTAAATTTACTGCTTCACTACCCAAACCAGTAAAATGTCCTTTTGCTGGGTCCTGCAAGGGAGGAATAGATTCAGAGTGTGAAGAAGGATACCAAGGAAACTTGTGTGCTACGTGTTCTCATGGCTACTACCTACGAtttaatttctgtttgaaatgtcCTGGATTCTTGGTTTCCATAATTTCATCATTGGTGGTTATTGGAGTCTTTATTTTGATCTTTGCAACGGTTCCGTGGGGGGACTCcaaaaagacagaaaataaTCGTACAGTTGCAGATATCATCATGTCCTGCTTCAAAATTGTCATTGGGTTTTACCAGGTTATTGCCGGTGTTTTCTCGGCACTGACCAGAGTTCATTGGCCAGTTACTCTGATCGCAATGGATAAGTTTCTGAAATTGTTTgatggcaatatttttcaatttgcGCCATGGAGTTGCGTCTATTCTCAACTTCGACTTAACCCGTTCTTAAAATTCATCTTGGTTCTTTCTGTTACCTTTGTTGTCGTTTCTTTTGCCTTTGTTTACATGTTCCTTCAATTGCTGTACATCAAAGGCAATAAGGATCGTCCAGAGAGCGAAAAGCTACGTGCTCTATCTAGGTTGAAGAGGTCCTGCTATCGGAACATTTTCCTGTTTCTGCTGGCATCATATCCCATGACAAGTAAAACAATTATCCAAATTCTTCCTCTTCAGGGCGCATGCGTCAAACATTGCTTTTCAGATGAAGGAAGCCAGTGTATCTCTCTCATGAAGGCTGATTACTCCATCCAATGCTTTACTCCCCAGCACAAGACGTATTGGCCATTTGCTGCCGTGTTTTCCGTATACCCTGTGGGATTTCCTCTGATGGTACTGCTGCTTATTTATAAATACCGACAATCAGAGCGGTATGAGGAACTTTCTTTTGGACTGAAAGTCTTCTTTGAGAACTACAAGGATAAATTTTGGTTCTGGGAAATAACAGAGATGTACCGAAAGTTGATACTTATTTcactaattttcctttttggttCAGGGGTAGTATCCCAGATTGGTCTGACTCTCCTGGTCGTGAGTGTCTTTGGTGTGGCCTACACATTCTTCCGCCCGATCAAAGGCAAATTTGAAGATCTCCTGCAAACCTTTGTTCTGTGGGTTATCTTCTTTGACGTTTGCCTCGGGGCAATGTACAGCACCTCTGACGTCACCAAAGATAATGACTCCTTGATCGTGAACATCCTGTTCGTCGTCCTCAACAGCTCTGTGCTGCTGGTTGCTTTAGgtaAAGGGATCGCGCACTTATCGTTTGTATACAAAAAGGTGTCATCGTGTGTCCTACATTGCATCAAAATGATTCATCGTGGATTGGCTTATATCAAGAGAAAGATTGTTAGCTGTTTCCAGACGGTCTTTGGCCAAAGATCAGAGCCATTTGATGTACAAAGGCATCTTCTGATCCAAGAGTTCACTTGATGAATGACGGAGTACCTAACGGGGTAATACTCAGTGAACGCCATAACGAGGAAGACTCTAATCGTAATTGTATCCCGAACGCTAAATAACGTTATTTTTAATTGTGGCTAATATAACGAAATTCGTTGTATCAACCAAAATGTTATATTATTATTCGTAATCTTCGGATCTTGGTAGTGTCTGTTTCCTTGTTCAATGAAGTTTTTACCCATCTTCAGAGGCAGTTTTTTAGGCCACTCTGAAAAATGCCATAATTTTCAAATCGCGTTCAGAAGGGGCTTCATGTAAACCTCACATTTGCATCATCGTACAGTAACAGTAACGCAttaaaaagacagtaaaaatcAAAATCGTGTCAAACACCAAAGTGGGGGAGGGCGTACCTTGAACCACCAATCTTATCATAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR051432 all species →	Family	Voltage and calcium-activated potassium channel auxiliary protein	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46473 all species →	GH08155P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_073244012.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.