Gene detail

Detailed information of XP_073244171.1 in Porites lutea

Genomic Location: chr5:40089397...40104161
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073388070.1

GTCGCTGCGAACCATTTCGCAGTAAGAAATCGAAAtcgaatttttgtttgttgtgaTCAGTAAAAGGGACTAGGATATGAGTACTTTTCATGGAAAAGAAATAGTCGATGCCCATATCCATTTATGGGACAACGAAAAGTTTTTCTATCCTTGGCCATCTTCAGATCTGAGTGGCATTTGTAGACCATTTCATTTAAGTGATCTTGAAGATGCAATGGCGCCATCTCCTGTACGAAAGGTGGTCTTCATTCAAGTCAACCAAACATATGATGAAACAGATTGGATCCTGGAGAAGGCCACTCAAAGCTCAACAATTGTTGGAATCATTGGCTGGGTTGATCTGACAGATCCTAAGGTGGATGTTATTTTGGACAACTACATGAATAAGCATAAAATATTCAGAGGAGTAAGAAACATCTTGGAGGGTGAACCTGATGACTGGCTTGGACAAGAGTCTGTTCACAGAGGTTTAGGATTTCTTGAGGAAAGAGGACTCACATACGATCTTCTCATTAGGACGAGACATTTTATGTTGGCAGACTCTGTTGTCAAGAAATTCCCTAAATTGAAGTTTGTTGTTGACCACGCTGCTAAACCTGAGATAAAAGAAGGAAAGATGGGTGAATGGAAGAAAGGACTGGAGATGTTAGCACAAAATCCAAACGTTTATTGTAAAATCTCGGGTCTTGTCACTGAAGCGTCCAGAGAGAACTGGAAAGTCGAAGACTTAATTCCTTATGTAAAGCATGTGACTTCCGTATTTGGGGCAGAACGCTGTATGTTTGGATCTGATTGGCCAGTTTGTACTCTATCAAGAGACGCATCTTACAAGCAGACATTTGAAGCTTATTTGCAGTGCGTTTCACATCTGACTGACAAAGAGAAGGAGGCAGTTTTCTGCGATAACGTGGTGAAGTTCTACGGACTTGATCAAGTCAAGTAGAATGCCAACATAAGAATAACAGTGCCGGCCATTTTTTGTCTCTTGGCTCGTTTTCAAGgggggaaataaaacaaaagaatccaTGGTAAAATAGAGGGATAAGTCATCAATTTTTATTAtgatttaaaagaatttttatcTGGTATGGAGTCAAGTTCAATTTGTGTGGTCATTATGATAAGAACATACAAAACGCTGTGACAGTACTCCCTAAGTTATAGCTTTTGCCCTTCTTAAGTAGAAAAGTTGAACACTAGGAACAGCAGAAAAGGTCTCTTTTTGTGGTTACCTTCTTGATGATTCACCGAACGTTTTGATTGTGATATGCACTTAGGGCGACCCTATAAAATTCATAGTGAAACAAAATAGGTAACAAATAAGGGttttaagtgttgtttttgAAATGAACCGGTGTAGCTCTTTCAGGTTTTAATTTTACAAGTATGCAACTATTTGACgtgcaattattattattagtagtaatggtaacaggactgagtggagtccaattcggtctgtaatcataactataacaaaattgtcaaatctgattggctatcaactgccctgatttcagccttaattggacagtttaataggacagtacgcgtcatgcctaagtaattggacagtgcGCGCCGTcacgcgcgcttaaatggctttttttttcactgctagcaaaacaaaatttcgaatttcttgtgttttgatttaaaaaatagcctattatatcacaaattttgttaaagttatgattaattggtaacaggactgagtggaatccaattcggtctgtaatcgtactcgtgattaaacaaatcggactcccgctacacggtcgtccgattttgttaatcactcgtatgattacagaccgaattggactccactcagtcctgttaccattacttattattattattattatttcgtaCACATTTTATATCTTACTTTTATATATTCTTTTTGATATCCTATGAGTATGAATGAGTTCACATAAAATATAGAAGCGTTTACTGAAGAGACAGTCTAACCTctgaataataaacaattattggatgaggttgagcataatatcatgaattatcaaaaccgaggtctgtgttatctgccgcagccgaaggctgaggcagataatacagacacgaggttttgataattcatgatatcatgcgaaaaccgaattcaataattgttttattatacattttttaaacaataggcaaaagaagacattcatctgttgacattcattctgtttctgaggagaacactccaaggggcttggtaaccaggcagacgttgaacttgacatgataaatgcaatatctgcagcagatattgcatttatcatgtcaagttccaagctattgtgaattgattgaatgctctcgaccaatcagatttttcatagggAGTctgatttataataataaacaattattggatgaggtttttgtgatatccggaataatcaaggtcgaggtaagtgttatcagccgaagccgaaggctgaggctgataacacttaccgagaccttgattattccggatatcaaaaaaccgaatctaataattgttttattatacattgttttgaagaaaataaccacaaacgcattatcgcagcgatcacagtttattttcaaacacttaaaaatgtacaactgagtgataaacaaagattattcactaatctgtaggtacagattagtgaataatctgtaggttgcgctgtttcccagaattaactgtaggcttttagccaatgagaagacagatggtgactacaatgtataataatagtgTTTATCAGCTCCTGTGTTTATCCAAGACAAAAGAAagtcacaaaaattaataaagacTATTAAGTACTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04909 all species →	Amidohydro_2	Amidohydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052350 all species →	Family	Metallo-dependent Lactonases	Interproscan
IPR006680 all species →	Domain	Amidohydrolase-related	Interproscan
IPR032466 all species →	Homologous_superfamily	Metal-dependent hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43569 all species →	AMIDOHYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18338	LRA2; L-rhamnono-1,4-lactonase	EC:3.1.1.65	Fructose and mannose metabolism	ko00051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.