Gene detail

Detailed information of XP_073244704.1 in Porites lutea

Genomic Location: chr5:32102489...32109325
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_073388603.1

AGAGCCTGAACCAAGGTGCACTTCgtaaaattcatttgttttattcatAATTCGGAGTTATTTCCCCAGAAGTATCAAATGCAAGAGCAGAACAGGCATATGATTTGCTTTCAGGGGTAGTTGATCGGTATTTCCAATCCGGGGAGAAAATTAAGTAAGCGCAGCCAATCACGTCAATCCAATTCGTTAAAGTTGTGCATGTTTTTGCGATTTGTTTGTTGGGAAGCTTATAAGCATTATTTTGTGCCAATATGGAAGTAGATTCCCTTCAAAGCAGTCGTATTAGAAGACTTTTTCAACTGGGAACCTTTGTTGTGTTTGTGTGGTGGGCAGCCATAGTGAAATCCATAAGTGCTGTGTTTACCTGCATATTTGGCCCAAATTACAGGCAATCTATGTATGGAAAGAGAATAAAAAAGAGCAAGTTTATACTTGATGATAAAATCACTCTAACTAACCATGGATCATTTGGTACTGTTCCAAAGAAGGTGTTAGAAGCTCGATGGCAGTTGCAGGAAGAGATGGATAAATACCCAGATGTATGGTTCAGATACAAAGTACAGAATATGTGGAACAAATCTCTCGAAACCGTGGCCAGGTTTGTAAGAGCTGATCCTCAAGACCTGGTGTTTGTTGCTAATGCAACTGCTGGCATCAATTCAGTGCTAAAGTGTCTGGATATTCATGAGGGTGATGGTATTCTTATAACTAATCAAACTTATGGAGCAGTTCAAATAACAGCACAAGATATTTGCCAAGCAAAAAAAGCCAAGCTTATTGTGCTTAATATCACATTTCCTACTTCAGACATGACATCTTCTGTGAATTACCATGCAACTGAGGTTGTTCAACATTATGAAAAAGTGTTACAGGAAAATCCCTCCATAAAGGTGGCAATTATAGATGCCATTACCAGTAATAGTGCGTTAAAGCTCCCTTTTAAGAAGCTAACTGAGGTGTGTCATAAGTACAATGTTCTGGCGTTGGTTGATGGTGCTCATGCACCCGGACAAATTCCCCTGGATCTTGACAGGCTTGGTGCAGATTTCTTTGTTGGAAATCTTCACAAATGGCTTTTTGCACCTCGTGGATGTGCTATTCTCTGGATCAGCCCCAAGTTTCATGATATCATCCTACCACAGGTTGTCTCGTGGAATCACGATAAAAGCCTTCAGgacagatttttcatacaaggCACAATGGACCATACCTCTTACATTGCGAGCGAGACTGCCATCAAGTTTTATAATGATATAGGAGGAATGAGTTCCATAACAAAGTACAACAGTCAGCTTGCATCTTGGGCAGCGATGTTGTTAGCAGAAGACTGGGACACAGAAGTACTTCCTGTTCCAGAATCCATGCGAGCCCCTTGCATGGCTGTTGTACGTCTTCCTGATACATTGTCAGCAGCTTATGGATCGACGTCTGAAGGAGCCAAGCAGATGATGTCTGATGTCTACACAAAATACAAAGTTGTTGCTTGTTTTGTGTGCGTACAAGCATCACTGTGGTGTCGAGTGTCTGCTCAGGTTTACAATGCCAAAGAAGACTACATGCTGCTTGCTGAAGTGGTCCTAAAGCTGATGGAAGAATGTGCaaatggtttttgtccaaaggTAGAGAAAGCTGCCGAACCTAACAGATGGTCGTGGTATGAAGAGCCACGttaacaaagaacaaaacatgaaataacATAAACAATGATGGGGATATTAGCCAGCAGAACAGGCGAtattttttgtgattttctGGCAAACGAAAAAACGAAGAGGGCGTAGGGCGCAAGACACGCGCGACGAGGGAATGCGCGGAAAAAGACTGTTTTTGCGCCTTCCCCCGTCGGGCACCGTGACTAGTGCTCCTGGCTCTCTTCGCCCTTGTCTTCGCTCGTCTGAAAAACGCCGTAGAAATACGCCCGTTCGGCTGGATATTATGACATTCTTATAATATCAATGGTGTGGTGAGATGTTTTAAGTAAATAATAGGTATATAATACCCTTTGCACTGTTCAACAACATCTTGATAATTATGGTAAGATAAAACCGTGAATCACAAGTTGAATTTAAAGTAAACCGGACACTGATTTTAGCTAGCCTGAacttcatccgattacttcgagtcgttaatACTCCCtcagaggagaaaacgacttgaagcaatcggatgaaattcaggctagattTCAGCTACCTGTACAGTACTGTAAAGTTTTAAGGGTTTTTTTATTAATAGTTTTTGCTAACAATATCGTTTAATCTCTTTTATCCATAGACTTGCACTAAGTCGACCTGTTTTTAGTTATAAACGGGGGAAAAGATTGTTAATAACCTCAAAGGAAGTGAAACGAGCTTTAGTGAGGTCGCGAAAGGTCATACTTGACAAAATAAAACTGCGCAACTGCTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00266 all species →	Aminotran_5	Aminotransferase class-V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000192 all species →	Domain	Aminotransferase class V domain	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43092 all species →	L-CYSTEINE DESULFHYDRASE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_073244704.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20247	EGT2; hercynylcysteine S-oxide lyase	EC:4.4.1.36	Histidine metabolism	ko00340	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.