Gene detail

Detailed information of XP_073245808.1 in Porites lutea

Genomic Location: chr1:59557657...59574652
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140940742

ATGGTTCGAGATAATATAGAAGACATCGGGAGTGCCTCAACTTTGTTACAAGCTCTTGTAAAAGACTTGCGTCAAAACCAGAACAACGAGGAAAGAGTCACAGCACTGGCAGATCGAATAACCAACCTTGCAAACAGAATGCATAAGCTCTCATTTGATAGAAGTGAAAATAATGCAGTGTTAATTCAGATACACAGTTGTTCTGTTACACTTTGGAATATTGCTGTGGCAATGAAGACTGGTGGAACAACAGGCGCAATTTCAAATGCACGATTAAGGCATGCAGCTTGTAACCTGTCAGTTTTGGCAAATGCTTCCGAAACAAGTGAGGTGACATACAGAAAACAACTCGTGATGACAACAAAAACCGGAAAAGCCTGGCTGGAATGTCAAAACCCAGCCATGGCAGAGAAGTGCCTTGCGTTAGCATCAGAGTGCTGGGATGGATTGCAAAAGGTGTGGTCATTAAATGAGATGCAGTCATCATCAACGGAACAAGTCAAAAACATTGCAGAAAGTGAGCGCTACATATTCCGTGTCTTTTGCTACAGAGCTGAAGCCAGCTTTTCGCTGAAAAATTACAACTCAGCTAGCTTTTATGTTAGGAAAGCCAGAGAATACTTGCCAAGACTAACTTTAAAAGAGAGCATTTCCTTGGCACAGCTGTGTTACAATTTTGGTGTTGATACCTACTACCGTGAGGAATACGAGAATTGCATCGGCTGGCTCAGGCAAAGTTATGATCTAAGAAAAGAAAGTAATCCCTTTGGAGCAAAAAAGGAGCAGGCAACAACATTGCGCCTTCTGGCAAATGCATATCTTGATTGGGACTACAAAAACAACTGGCAGATGGCTCTCAATGCAACTGACCTTGCAAACTCTGAATATAGCCATCCCGCTGGACTTTATCTTAAAGCAAAACTACTTATTATGGGTAATGGGGAAACGATTCCACTTTCGAGATTGAAGTCAGCCTTTGAGGAAACTCTTCAGCACCCGGACTTAAAGGTGGATCTTGGTTTGTGTGCAGTAAATTTGGCAATCCAGCAAAACAGACCGGAATTGGCTTTTGACTGTTTGGAAATTCTGACTTCACGCTTCAAAAACTCTCCGCACCTTTATAAGATTCAACTTGAGCACTTGGAACTCTTGTTAAAAAACAAAAAGGATGACGCAGCAAAGGAGCTTATCGAAAACTGCATTGTTGGTGAGATGAGCAAATCCGTTGATTCAGAGATGTTTCAAAGATTCCATATTCTTTTGTGGGAAAAAGCGGCTGTTTGTTATGAGGCAAAAGACTACAATGAAGCATTAAACTGGTATAATTATTCCTTGAGCCTCTTTTCCTCGAAGGAGACAAACAGCAAAAGTATTGCAAAACTGCAGCGAAACAAATGTTGTTGTTACATGAATCTTCAAGACTATGAGAAGGCCAAAGAAGCCATAAGAGAAGCGGAAGAAAATGATTCCGAGAATGCTGTTGTTTACTTCTATAAGTTTAAAATAGCCCTCTTGGAAGGACAAGATGACCTTGCTGTGGACGCAATGACTAAGATGAGTGAAGTTGATTCAAGGCAAGATAATAACATAACAGAAACTGATGCTCATTTGTTGATATGTCTGGCTGCACAATTGGCTTTAGAGCAAAAGAACCATCAAGTAACCGTCAGTGCCCTGGAACAGGTCATAGCTACTAGCAGTGATAATCAACAAGTTTTAACGTCACTTAGATGCTTGTCAAGGTTAAAGCTCACAGAAATTTCAGATTCAGGAGCAAGGAGAGATGTTACCTCTTTTCTTCGCTATCTACAGATCGCGTTGGATCGCTTGTCTCAGATGCACGGTGCAGGCGATACGCATGTGTATGTAGAGGCGATGTGGTTTATGAAAATCGCTTGGAATGTTGCACTGGAAAGTACTGATAATAGCTTGGAAATGCAAGAGCTTTTCCTGCGTTGTTATAAGTTTTCTTGCCTTTGTCCCGTGGAATCTTCTAACTTCGTTCGTCAAAAGAATTGCCTTGTGATGGCTGCTGCATCTGCTGTTCAAGCAGCAAGAGAACAAGACAAAAATAGCCAAGAAGAGAAGAAAAAGCTATTAAGGCAGTGTTTGGAGCACGTCGAGACATGTCGTGATCTTCGCAAAAAGATGGCTGGGGGAGGCGTAGTGAGTCAAAAAGACGAATCGTTTATACTCCTCACTCTGTATGAGTTCGAGGCCAAGGTGCAACTTGGTACTGATTCAGACCTATATGAATGTTTAGACGCAGCGGAAGCTTTGCCACACACTGATCCAAGTACCTTTGAAACTCTTGCTGCCATTGCAGTCGAATCTACTACTTGTAACAGAGAGATAAGTATGAGAGCTTTGAGAGTTGCTATCAAGAAACATCTTGCAATGGAATCAGTGGACTTCGCTAAGTTGAGTAAAGCTTTTCACAGTCTGGTATATCATGCATTAAGCAGTGGCAGTAGTAGTGACGCTGAGAGCAAAGAAGAGGCTTTGGCTATATACCAAGACATTTGTGAACTCATCGAGAACCAGGCAAAGGAATCGTATCCCGAAGTTCAAATCCTGTGGCTCATGACGAAAGCGTGGAACTGTGGGATAAACCTATTCAGTGCCAGTAGACATGAGGCCGGAGAGAAGTGGTGTTCGCTGGCCATGAGACTACTGCATCATTTGTCTACATTTAAGTGCAACTATCAAGAAAAGATGACCAAGGTATACGGTGATCTTCTGGATCGTATGGAAAACAACACATTCAAGCGCCAAGTTGAAGAGTGA

Transcript

rna-XM_073389707.1

CCCCAATGCAGCCTGTGTGACATTCGTTTCGGTTTTTTAAAGGACAAAATTGGCCAAGTACGGGGCTGGATGTTGTGACATTTCGACATGGTTCGAGATAATATAGAAGACATCGGGAGTGCCTCAACTTTGTTACAAGCTCTTGTAAAAGACTTGCGTCAAAACCAGAACAACGAGGAAAGAGTCACAGCACTGGCAGATCGAATAACCAACCTTGCAAACAGAATGCATAAGCTCTCATTTGATAGAAGTGAAAATAATGCAGTGTTAATTCAGATACACAGTTGTTCTGTTACACTTTGGAATATTGCTGTGGCAATGAAGACTGGTGGAACAACAGGCGCAATTTCAAATGCACGATTAAGGCATGCAGCTTGTAACCTGTCAGTTTTGGCAAATGCTTCCGAAACAAGTGAGGTGACATACAGAAAACAACTCGTGatGACAACAAAAACCGGAAAAGCCTGGCTGGAATGTCAAAACCCAGCCATGGCAGAGAAGTGCCTTGCGTTAGCATCAGAGTGCTGGGATGGATTGCAAAAGGTGTGGTCATTAAATGAGATGCAGTCATCATCAACGGAACAAGTCAAAAACATTGCAGAAAGTGAGCGCTACATATTCCGTGTCTTTTGCTACAGAGCTGAAGCCAGCTTTTCGCTGAAAAATTACAACTCAGCTAGCTTTTATGTTAGGAAAGCCAGAGAATACTTGCCAAGACTAACTTTAAAAGAGAGCATTTCCTTGGCACAGCTGTGTTACAATTTTGGTGTTGATACCTACTACCGTGAGGAATACGAGAATTGCATCGGCTGGCTCAGGCAAAGTTATGATCTAAGAAAAGAAAGTAATCCCTTTGGAGCAAAAAAGGAGCAGGCAACAACATTGCGCCTTCTGGCAAATGCATATCTTGATTGGGACTACAAAAACAACTGGCAGATGGCTCTCAATGCAACTGACCTTGCAAACTCTGAATATAGCCATCCCGCTGGACTTTATCTTAAAGCAAAACTACTTATTATGGGTAATGGGGAAACGATTCCACTTTCGAGATTGAAGTCAGCCTTTGAGGAAACTCTTCAGCACCCGGACTTAAAGGTGGATCTTGGTTTGTGTGCAGTAAATTTGGCAATCCAGCAAAACAGACCGGAATTGGCTTTTGACTGTTTGGAAATTCTGACTTCACGCTTCAAAAACTCTCCGCACCTTTATAAGATTCAACTTGAGCACTTGGAACtcttgttaaaaaacaaaaaggatgACGCAGCAAAGGAGCTTATCGAAAACTGCATTGTTGGTGAGATGAGCAAATCCGTTGATTCAGAGATGTTTCAAAGATTCCATATTCTTTTGTGGGAAAAAGCGGCTGTTTGTTATGAGGCAAAAGACTACAATGAAGCATTAAACTGGTataattattccttgagcctcTTTTCCTCGAAGGAGACAAACAGCAAAAGTATTGCAAAACTGCAGcgaAACAAATGTTGTTGTTACATGAATCTTCAAGACTATGAGAAGGCCAAAGAAGCCATAAGAGAAGCGGAAGAAAATGATTCCGAGAATGCTGTTGTTTACTTCTATAAGTTTAAAATAGCCCTCTTGGAAGGACAAGATGACCTTGCTGTGGACGCAATGACTAAGATGAGTGAAGTTGATTCAAGGCAAGataataacataacagaaactgATGCTCATTTGTTGATATGTCTGGCTGCACAATTGGCTTTAGAGCAAAAGAACCATCAAGTAACCGTCAGTGCCCTGGAACAGGTCATAGCTACTAGCAGTGATAATCAACAAGTTTTAACGTCACTTAGATGCTTGTCAAGGTTAAAGCTCACAGAAATTTCAGATTCAGGAGCAAGgagagaTGTTACCTCTTTTCTTCGCTATCTACAGATCGCGTTGGATCGCTTGTCTCAGATGCACGGTGCAGGCGATACGCATGTGTATGTAGAGGCGATGTGGTTTATGAAAATCGCTTGGAATGTTGCACTGGAAAGTACTGATAATAGCTTGGAAATGCAAGAGCTTTTCCTGCGTTGTTATAAGTTTTCTTGCCTTTGTCCCGTGGAATCTTCTAACTTCGTTCGTCAAAAGAATTGCCTTGTGATGGCTGCTGCATCTGCTGTTCAAGCAGCAAGAGAACAAGACAAAAATAGCCAAGAAGAGAAGAAAAAGCTATTAAGGCAGTGTTTGGAGCACGTCGAGACATGTCGTGATCTTCGCAAAAAGATGGCTGGGGGAGGCGTAGTGAGTCAAAAAGACGAATCGTTTATACTCCTCACTCTGTATGAGTTCGAGGCCAAGGTGCAACTTGGTACTGATTCAGACCTATATGAATGTTTAGACGCAGCGGAAGCTTTGCCACACACTGATCCAAGTACCTTTGAAACTCTTGCTGCCATTGCAGTCGAATCTACTACTTGTAACAGAGAGATAAGTATGAGAGCTTTGAGAGTTGCTATCAAGAAACATCTTGCAATGGAATCAGTGGACTTCGCTAAGTTGAGTAAAGCTTTTCACAGTCTGGTATATCATGCATTAAGCAGTGGCAGTAGTAGTGACGCTGAGAGCAAAGAAGAGGCTTTGGCTATATACCAAGACATTTGTGAACTCATCGAGAACCAGGCAAAGGAATCGTATCCCGAAGTTCAAATCCTGTGGCTCATGACGAAAGCGTGGAACTGTGGGATAAACCTATTCAGTGCCAGTAGACATGAGGCCGGAGAGAAGTGGTGTTCGCTGGCCATGAGACTACTGCATCATTTGTCTACATTTAAGTGCAACTATCAAGAAAAGatGACCAAGGTATACGGTGATCTTCTGGATCGTATGGAAAACAACACATTCAAGCGCCAAGTTGAAGAGTGACATAAACTGACCGTCTAATTAGGCAGCAGAAAATACACATTTCTGGGAAAAACATTCTTATAGTTATACTTGGCGGTTATGTATATGCATCCCGGCATGGACTAGCTTTGATTGAGTTTTGTTCCAAGGAAATCATAAGATTTATTTTACTACATTCCTCGTTTTCGTAAAAGTCTATTTGAAAAACCTATATTTCTATTGCACATAACGATATGCTCTGACATGGAAAGAGAAATTCGCGCAGTTATAGTTTTGCTTAAGAAGTGGTTCC

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003656 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08631 all species →	SPO22	Meiosis protein SPO22/ZIP4 like	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013940 all species →	Family	Meiosis specific protein Spo22/ZIP4/TEX11	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38487 all species →	TESTIS EXPRESSED 11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051321 all species →	Biological Process	meiotic cell cycle	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24574	TEX11; testis-expressed protein 11	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.