Gene detail

Detailed information of XP_073246512.1 in Porites lutea

Genomic Location: chr6:18609413...18612527
NR annotation: no NCBI-NR hit recorded
Species Porites lutea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC140941411

ATGGAGCAACATTCGGATAAGCAGATACCCTGTGAGGTCCGCAGGTTTGTCCGTGAACGGCAAAATATCATCACAAATGTGTCAAACCCAAGTGAATTGATCGAACCTTTGAGCGACGTAGTCGAGCTTTTTCTGCGAGGGTCTCTGCTACCCGCGAAAGTTCCTCTTGAAAAACGAGCGTTCCTGAAGGCTGAGTTTGTAAACAACCACTTTGTGAGGTTCGCTGAATGTATTCTTTCTTCGCCAGTGATTGGATTTTACAGTGGTTTCAGCGAAGAACAGAAAAGGGAGCTGTTTGATGTGTTTTTCCTCCGTGGACCCTCTCACGACAGTTTACTTGTTTTAGGGGAAGTACTTTCTAAGAAAACCACCAATCATAAAAACACTAAAGTAGTAGTTTCCATCTTAGAGAAGTTTTGCACTGAAGGAAGGTTGGTTGACATTTTTGTACAGCAATGCCAGGTGTCTAGGTCTTCGGGAAGTGCGTCTTTAAAATTCAGTCAATCTGAATTTGAAAACAAGTTATGGAGACAGCTTATCACCATAGTGGTTTCCCTTCCTCAGAGAGTGGCAAACAAGATGAGGCAGAAGTGTAGCTCACTGTTTTACCCAGAGCCGTACTTTCAAATGGTTGCTGAGCAGATTCTCAAGGCATTAGAAAAGTTGCATGACAACCTGTCAATGTCACACGATTGCTCATTCAAGTTCCTTGGAGAGGTGATTGGGAGAGTTTGTATGGCAGGACAAGCAGAGACTACATTTGCCATTTTGTTACCTGCATTGGAGAAGTGGCTGCAGACAAGTCCACTTTGGAATAGAATTTGTGCAAGACTAATTACTGGTGTCCCGGACCACACCATGGAACATGTTGCAGAAGGACTTCTCAAGTCAGCTAAAAGCCCCATGTTGATAGCCAAGTTACTTGGTGACTCAGTTCTCACCAGCTCTAAACTCAAGTACCTGCTTACTACCAAGTTTCTGTTGATGAGGTTCTATTCTAACATCAATGTACTTCACAACATTATTGGATATTTATCAGGTTGTAAGCGTAGGCATTTGTTAGTGGAAACACTCCTGAAACTCTTTGATGTATGGGCTGATAAAAGTGCGATTAAACATGCAACGTATGATCAGCATTTTTACATCACTTGTGCTGTTGTTCTTTCATTCAGTCATTTGAGTGCAGAAGAGAAGGCATTGCAAAAGCATGCTTTACTTACAAAGTTGTTGGTCGGTGTGCAAAGTCATCTTGACAGCCCCTTGGAAAAGGTACGACGTCTTGGAATGGTGGTTGCAGAATGTGTCACATCTAGTCTTGAACCCAGTGGGGAGAAACTCAAGTTTGATTATGCGGAGGATGAAGACACTAAACTATTACATTTGTTAGCAAAAGGCTTGCAGGAGGGGATGGACATGGGAAGGGTGAAGACTGGGAAGAGTTGGAAAGAATGTAATGGCAATCCAGAGAAAAACAAAGAAACAGAAACAAATGGGATTTCAAATCCAGAACGTGCCAGTTCTTCCCAAAAGAGTGCCCCTCAGAATGATGGTGATGTCAGTGATGATGACAATGAGTTGTTGCCATATGACCTTGATGATGAAGAGGAAAGGGATAGCAACTCCTATTCTCCTAAGCATTTACGTGACTGCATAGATGGCCTTATAGCATCAGATGATCCGCCTAAGACAGAAGGGTCCCTTAAAGCCTTACAGAAGCTCATTAATGCTGGCTTAGATGATCTTGAAGATGTTAGTGTAGAATTGGTAAAATTGCTGCTTCATCTTCAGGACAAATACTCGACAGATAAGTTTTGTGCGCTTCGTCACAATGCTATGGTATCAGTTACCATCAGGTGTCCTCAGCAAATTGCGTGTTATTTGACAGAAGAGTTTTTTGCTCCCAACTACAATCTCCAACAACGCATGGACATGTTAAATGTTCTTGCTGATGCCGCACAACAACTCTCAGCTCCTGCAGAAGTTACCAAGATGAGAACAGTGCCAAGAAAGTTTCCACTCCCTCAAGCAGCTTATGCTAAAACGGCAGAAGGTATTCCGGAGTGGCAGAAGATTGTACAAGAGAGAATAAACAGTAAGACAAAGAGGTTTGTCAAAGGGCCAACCAAACCACAGCCCCTAGCTGTTGCTAATAAGTTTGCTGGTGTTGCTGCTTTCTTTTTTTTCCCTCTGATGAAAAACTTTGACAGTAAGGTGAACGCATTAGATCTTTTGGGTGGAGATACTCTTGTCCTTGGACGTCTTATTTATACCCTTGGAATAATCATGTACTCTGCCCGGGAAACACCCATCGCAAGAAACATGGGGACAGCACTGTTAGAATTTACCTGGGCATTAAAATATCATCAAGAGCCATTTGTGCGACAGTCACTGATCTTTGCTCAGGCCATGGTTGCAGTTTCTGTTCCATCTTCATCTTTGGTGAATGATGCCCCTGGGGAACTGTTTGAGCTTCATGACTGGTTGAAGATGATTGTTCAGAATGACAGTGATGCTGACAGTGTAAAGTCTGCTTTACAGACACTTGTTTTGTTAGAAGATCTTTTCAAAAATGAAGTGATTGTTCATGGCTGA

Transcript

rna-XM_073390411.1

GTTTCTGGTTCCTTTAATTCTATTGAATGGAGCAACATTCGGATAAGCAGATACCCTGTGAGGTCCGCAGGTTTGTCCGTGAACGGCAAAATATCATCACAAATGTGTCAAACCCAAGTGAATTGATCGAACCTTTGAGCGACGTAGTCGAGCTTTTTCTGCGAGGGTCTCTGCTACCCGCGAAAGTTCCTCTTGAAAAACGAGCGTTCCTGAAGGCTGAGTTTGTAAACAACCACTTTGTGAGGTTCGCTGAATGTATTCTTTCTTCGCCAGTGATTGGATTTTACAGTGGTTTCAGCGAAGAACAGAAAAGGGAGCTGTTTGATGTGTTTTTCCTCCGTGGACCCTCTCACGACAGTTTACTTGTTTTAGGGGAAGTACTTTCTAAGAAAACCACCAATCATAAAAACACTAAAGTAGTAGTTTCCATCTTAGAGAAGTTTTGCACTGAAGGAAGGTTGGTTGACATTTTTGTACAGCAATGCCAGGTGTCTAGGTCTTCGGGAAGTGCGTCTTTAAAATTCAGTCAATCTgaatttgaaaacaagttaTGGAGACAGCTTATCACCATAGTGGTTTCCCTTCCTCAGAGAGTGGCAAACAAGATGAGGCAGAAGTGTAGCTCACTGTTTTACCCAGAGCCGTACTTTCAAATGGTTGCTGAGCAGATTCTCAAGGCATTAGAAAAGTTGCATGACAACCTGTCAATGTCACACGATTGCTCATTCAAGTTCCTTGGAGAGGTGATTGGGAGAGTTTGTATGGCAGGACAAGCAGAGACtacatttgccattttgttaCCTGCATTGGAGAAGTGGCTGCAGACAAGTCCACTTTGGAATAGAATTTGTGCAAGACTAATTACTGGTGTCCCGGACCACACCATGGAACATGTTGCAGAAGGACTTCTCAAGTCAGCTAAAAGCCCCATGTTGATAGCCAAGTTACTTGGTGACTCAGTTCTCACCAGCTCTAAACTCAAGTACCTGCTTACTACCAAGTTTCTGTTGATGAGGTTCTATTCTAACATCAATGTACTTCACAACATTATTGGATATTTATCAGGTTGTAAGCGTAGGCATTTGTTAGTGGAAACACTCCTGAAACTCTTTGATGTATGGGCTGATAAAAGTGCGATTAAACATGCAACGTATGATCAGCATTTTTACATCACTTGTGCTGTTGTTCTTTCATTCAGTCATTTGAGTGCAGAAGAGAAGGCATTGCAAAAGCATGCTTTACTTACAAAGTTGTTGGTCGGTGTGCAAAGTCATCTTGACAGCCCCTTGGAAAAGGTACGACGTCTTGGAATGGTGGTTGCAGAATGTGTCACATCTAGTCTTGAACCCAGTGGGGAGAAACTCAAGTTTGATTATGCGGAGGATGAAGACACTAAACTATTACATTTGTTAGCAAAAGGCTTGCAGGAGGGGATGGACATGGGAAGGGTGAAGACTGGGAAGAGTTGGAAAGAATGTAATGGCAATccagagaaaaacaaagaaacagaaacaaatgGGATTTCAAATCCAGAACGTGCCAGTTCTTCCCAAAAGAGTGCCCCTCAGAATGATGGTGATGTCagtgatgatgacaatgagTTGTTGCCATATGACCTTGATGATGAAGAGGAAAGGGATAGCAACTCCTATTCTCCTAAGCATTTACGTGACTGCATAGATGGCCTTATAGCATCAGATGATCCGCCTAAGACAGAAGGGTCCCTTAAAGCCTTACAGAAGCTCATTAATGCTGGCTTAGATGATCTTGAAGATGTTAGTGTAGAATTGGTAAAATTGCTGCTTCATCTTCAGGACAAATACTCGACAGATAAGTTTTGTGCGCTTCGTCACAATGCTATGGTATCAGTTACCATCAGGTGTCCTCAGCAAATTGCGTGTTATTTGACAGAAGAGTTTTTTGCTCCCAACTACAATCTCCAACAACGCATGGACATGTTAAATGTTCTTGCTGATGCCGCACAACAACTCTCAGCTCCTGCAGAAGTTACCAAGATGAGAACAGTGCCAAGAAAGTTTCCACTCCCTCAAGCAGCTTATGCTAAAACGGCAGAAGGTATTCCGGAGTGGCAGAAGATTGTACAAGAGAGAATAAACAGTAAGACAAAGAGGTTTGTCAAAGGGCCAACCAAACCACAGCCCCTAGCTGTTGCTAATAAGTTTGCTGGTGTtgctgctttcttttttttccctctgaTGAAAAACTTTGACAGTAAGGTGAACGCATTAGATCTTTTGGGTGGAGATACTCTTGTCCTTGGACGTCTTATTTATACCCTTGGAATAATCATGTACTCTGCCCGGGAAACACCCATCGCAAGAAACATGGGGACAGCACTGTTAGAATTTACCTGGGCATTAAAATATCATCAAGAGCCATTTGTGCGACAGTCACTGATCTTTGCTCAGGCCATGGTTGCAGTTTCTGTTCCATCTTCATCTTTGGTGAATGATGCCCCTGGGGAACTGTTTGAGCTTCATGACTGGTTGAAGATGATTGTTCAGAATGACAGTGATGCTGACAGTGTAAAGTCTGCTTTACAGACACTTGTTTTGTTAGAAgatcttttcaaaaatgaagTGATTGTTCATGGCTGATCCTGTTGGCGTTGATTTGGGTTTTTTTGATGAAGATTGTATAAATTACTGTTTGTTCtgatacaataatattatattcTTGGTTCAAATCTTTTGCCCTTTGTTCCTGGCTCATTATCGTACGTTACCATTCCAAAgcacaaaggaaaataatattttaaaccAAATACCCAGTGGTCTAAAATTATACCACAATATACTCTCTATATTCTTTGAATGAATTATGCTAAGAGATTCTGTCGGTGAACCATTGTTGTTAGATTGAAGGTGGGATGATTTTACACAGTGTAAACATATCTTGATAGACAACTGTTGACCTGTATTCACTTTTCATCTGTGTTACCATTTACTGTTGGAGGTAAGTTAGGTATAAGAACGAACTGGAGAATGCttataaaattcttttttatgttCTGTGTCGTTGTTTTGAAGAGAACTGTAACAAAGTGTCATTCTGACATGTGCAATACAtacagagaaaaataatttttttatta

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10193 all species →	Telomere_reg-2	Telomere length regulation protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019337 all species →	Domain	Telomere length regulation protein, conserved domain	Interproscan
IPR038528 all species →	Homologous_superfamily	TEL2, C-terminal domain superfamily	Interproscan
IPR051970 all species →	Family	Telomere Length Regulation TEL2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15830 all species →	TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007004 all species →	Biological Process	telomere maintenance via telomerase	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0050821 all species →	Biological Process	protein stabilization	Interproscan
GO:0051879 all species →	Molecular Function	Hsp90 protein binding	Interproscan
GO:0070209 all species →	Cellular Component	obsolete ASTRA complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11137	TELO2, TEL2; telomere length regulation protein	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.